Phenotype measure:   HMDPpheno8   heptadecenoate

ID, description, units MPD:50360   heptadecenoate   liver 10-heptadecenoate (17:1n7) (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver 10-heptadecenoate (17:1n7) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means1081510   None
Median of the strain means1051028   None
SD of the strain means± 320102
Coefficient of variation (CV)0.296
Min–max range of strain means420288   –   1862860   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1854051093671.46 88288147317.6886 1.3852 0.1942
Residuals 34 2167002064745.04 63735354845.4425


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 1257229.0 0.0   1   0.0 0.0 1257229.0, 1257229.0 0.55
A/J m 1038639.0 1832.0   2   1295.0 0.00176 1037344.0, 1039935.0 -0.13
AKR/J m 1120563.0 0.0   1   0.0 0.0 1120563.0, 1120563.0 0.12
AXB10/PgnJ m 828302.0 0.0   1   0.0 0.0 828302.0, 828302.0 -0.79
AXB12/PgnJ m 1451216.0 0.0   1   0.0 0.0 1451216.0, 1451216.0 1.15
AXB13/PgnJ m 1013491.0 0.0   1   0.0 0.0 1013491.0, 1013491.0 -0.21
AXB15/PgnJ m 1223695.0 0.0   1   0.0 0.0 1223695.0, 1223695.0 0.44
AXB19a/PgnJ m 778834.0 0.0   1   0.0 0.0 778834.0, 778834.0 -0.95
AXB19b/PgnJ m 605845.0 129639.0   2   91668.0 0.214 514176.0, 697513.0 -1.49
AXB19/PgnJ m 792965.0 0.0   1   0.0 0.0 792965.0, 792965.0 -0.9
AXB1/PgnJ m 514092.0 0.0   1   0.0 0.0 514092.0, 514092.0 -1.77
AXB23/PgnJ m 980712.0 0.0   1   0.0 0.0 980712.0, 980712.0 -0.31
AXB24/PgnJ m 1175192.0 45390.0   2   32096.0 0.0386 1143096.0, 1207287.0 0.29
AXB2/PgnJ m 1756279.0 0.0   1   0.0 0.0 1756279.0, 1756279.0 2.11
AXB4/PgnJ m 744935.0 0.0   1   0.0 0.0 744935.0, 744935.0 -1.05
AXB5/PgnJ m 1395597.0 0.0   1   0.0 0.0 1395597.0, 1395597.0 0.98
AXB6/PgnJ m 994130.0 0.0   1   0.0 0.0 994130.0, 994130.0 -0.27
AXB8/PgnJ m 1332743.0 0.0   1   0.0 0.0 1332743.0, 1332743.0 0.78
BALB/cJ m 936821.0 119120.0   3 68774.0 0.127 799518.0, 1012584.0 -0.45
BTBR T+ Itpr3tf/J m 665182.0 0.0   1   0.0 0.0 665182.0, 665182.0 -1.3
BUB/BnJ m 1384196.0 0.0   1   0.0 0.0 1384196.0, 1384196.0 0.95
BXA11/PgnJ m 1663669.0 0.0   1   0.0 0.0 1663669.0, 1663669.0 1.82
BXA12/PgnJ m 1813309.0 0.0   1   0.0 0.0 1813309.0, 1813309.0 2.29
BXA13/PgnJ m 672333.0 0.0   1   0.0 0.0 672333.0, 672333.0 -1.28
BXA14/PgnJ m 465150.0 0.0   1   0.0 0.0 465150.0, 465150.0 -1.93
BXA16/PgnJ m 1192135.0 308404.0   2   218074.0 0.259 974061.0, 1410210.0 0.35
BXA1/PgnJ m 1599592.0 0.0   1   0.0 0.0 1599592.0, 1599592.0 1.62
BXA24/PgnJ m 926274.0 0.0   1   0.0 0.0 926274.0, 926274.0 -0.48
BXA25/PgnJ m 1548731.0 0.0   1   0.0 0.0 1548731.0, 1548731.0 1.46
BXA26/PgnJ m 1862860.0 0.0   1   0.0 0.0 1862860.0, 1862860.0 2.44
BXA2/PgnJ m 1098828.0 0.0   1   0.0 0.0 1098828.0, 1098828.0 0.05
BXA4/PgnJ m 1349390.0 0.0   1   0.0 0.0 1349390.0, 1349390.0 0.84
BXA7/PgnJ m 1266266.0 0.0   1   0.0 0.0 1266266.0, 1266266.0 0.58
BXA8/PgnJ m 1491495.0 0.0   1   0.0 0.0 1491495.0, 1491495.0 1.28
BXD11/TyJ m 1180478.0 0.0   1   0.0 0.0 1180478.0, 1180478.0 0.31
BXD12/TyJ m 1082734.0 0.0   1   0.0 0.0 1082734.0, 1082734.0 0.0
BXD13/TyJ m 1026469.0 0.0   1   0.0 0.0 1026469.0, 1026469.0 -0.17
BXD14/TyJ m 689040.0 0.0   1   0.0 0.0 689040.0, 689040.0 -1.23
BXD15/TyJ m 1136984.0 0.0   1   0.0 0.0 1136984.0, 1136984.0 0.17
BXD18/TyJ m 1434925.0 0.0   1   0.0 0.0 1434925.0, 1434925.0 1.1
BXD19/TyJ m 1115788.0 242847.0   2   171719.0 0.218 944069.0, 1287507.0 0.11
BXD1/TyJ m 982693.0 0.0   1   0.0 0.0 982693.0, 982693.0 -0.31
BXD20/TyJ m 682434.0 0.0   1   0.0 0.0 682434.0, 682434.0 -1.25
BXD21/TyJ m 1506539.0 0.0   1   0.0 0.0 1506539.0, 1506539.0 1.33
BXD22/TyJ m 866287.0 0.0   1   0.0 0.0 866287.0, 866287.0 -0.67
BXD24/TyJ m 1202337.0 0.0   1   0.0 0.0 1202337.0, 1202337.0 0.38
BXD24/TyJ-Cep290rd16/J m 958918.0 0.0   1   0.0 0.0 958918.0, 958918.0 -0.38
BXD28/TyJ m 1138112.0 44582.0   2   31524.0 0.0392 1106587.0, 1169636.0 0.18
BXD29-Tlr4lps-2J/J m 1052067.0 0.0   1   0.0 0.0 1052067.0, 1052067.0 -0.09
BXD2/TyJ m 876224.0 0.0   1   0.0 0.0 876224.0, 876224.0 -0.64
BXD32/TyJ m 1755709.0 0.0   1   0.0 0.0 1755709.0, 1755709.0 2.11
BXD33/TyJ m 553064.0 0.0   1   0.0 0.0 553064.0, 553064.0 -1.65
BXD34/TyJ m 1199292.0 0.0   1   0.0 0.0 1199292.0, 1199292.0 0.37
BXD36/TyJ m 1132613.0 0.0   1   0.0 0.0 1132613.0, 1132613.0 0.16
BXD38/TyJ m 1861852.0 0.0   1   0.0 0.0 1861852.0, 1861852.0 2.44
BXD39/TyJ m 998220.0 0.0   1   0.0 0.0 998220.0, 998220.0 -0.26
BXD40/TyJ m 1211066.0 0.0   1   0.0 0.0 1211066.0, 1211066.0 0.4
BXD42/TyJ m 936880.0 0.0   1   0.0 0.0 936880.0, 936880.0 -0.45
BXD5/TyJ m 1274430.0 0.0   1   0.0 0.0 1274430.0, 1274430.0 0.6
BXD6/TyJ m 963305.0 0.0   1   0.0 0.0 963305.0, 963305.0 -0.37
BXD8/TyJ m 1312396.0 0.0   1   0.0 0.0 1312396.0, 1312396.0 0.72
BXD9/TyJ m 784965.0 0.0   1   0.0 0.0 784965.0, 784965.0 -0.93
BXH10/TyJ m 658097.0 0.0   1   0.0 0.0 658097.0, 658097.0 -1.32
BXH19/TyJ m 621902.0 0.0   1   0.0 0.0 621902.0, 621902.0 -1.44
BXH20/KccJ m 909626.0 0.0   1   0.0 0.0 909626.0, 909626.0 -0.54
BXH22/KccJ m 1031726.0 0.0   1   0.0 0.0 1031726.0, 1031726.0 -0.16
BXH2/TyJ m 809604.0 0.0   1   0.0 0.0 809604.0, 809604.0 -0.85
BXH4/TyJ m 743024.0 41190.0   2   29126.0 0.0554 713898.0, 772150.0 -1.06
BXH6/TyJ m 618457.0 0.0   1   0.0 0.0 618457.0, 618457.0 -1.45
BXH7/TyJ m 938089.0 0.0   1   0.0 0.0 938089.0, 938089.0 -0.45
BXH8/TyJ m 1009618.0 0.0   1   0.0 0.0 1009618.0, 1009618.0 -0.22
BXH9/TyJ m 1220205.0 0.0   1   0.0 0.0 1220205.0, 1220205.0 0.43
C3H/HeJ m 858256.0 409146.0   2   289310.0 0.477 568946.0, 1147567.0 -0.7
C57BL/6J m 1200014.0 273606.0   5 122360.0 0.228 746981.0, 1446881.0 0.37
C57L/J m 1575800.0 0.0   1   0.0 0.0 1575800.0, 1575800.0 1.54
C58/J m 435549.0 0.0   1   0.0 0.0 435549.0, 435549.0 -2.02
CAST/EiJ m 420288.0 0.0   1   0.0 0.0 420288.0, 420288.0 -2.07
CBA/J m 1006444.0 0.0   1   0.0 0.0 1006444.0, 1006444.0 -0.23
CE/J m 1021559.0 0.0   1   0.0 0.0 1021559.0, 1021559.0 -0.19
CXB11/HiAJ m 1021418.0 156275.0   2   110503.0 0.153 910915.0, 1131921.0 -0.19
CXB12/HiAJ m 1253431.0 76928.0   2   54397.0 0.0614 1199034.0, 1307827.0 0.54
CXB13/HiAJ m 1049990.0 245502.0   3 141741.0 0.234 767178.0, 1208256.0 -0.1
CXB1/ByJ m 1027362.0 254635.0   3 147014.0 0.248 754847.0, 1259227.0 -0.17
CXB2/ByJ m 1350461.0 127202.0   3 73440.0 0.0942 1258629.0, 1495652.0 0.84
CXB3/ByJ m 1089445.0 52991.0   2   37470.0 0.0486 1051974.0, 1126915.0 0.02
CXB4/ByJ m 1143240.0 188453.0   2   133256.0 0.165 1009984.0, 1276496.0 0.19
CXB6/ByJ m 817131.0 80500.0   3 46477.0 0.0985 737484.0, 898458.0 -0.83
CXB7/ByJ m 981364.0 122669.0   2   86740.0 0.125 894624.0, 1068104.0 -0.31
CXB8/HiAJ m 1103266.0 437380.0   3 252522.0 0.396 804727.0, 1605321.0 0.07
CXB9/HiAJ m 1225680.0 284266.0   3 164121.0 0.232 994889.0, 1543211.0 0.45
DBA/2J m 1350282.0 436528.0   4 218264.0 0.323 852394.0, 1792826.0 0.84
FVB/NJ m 695262.0 0.0   1   0.0 0.0 695262.0, 695262.0 -1.21
I/LnJ m 587190.0 0.0   1   0.0 0.0 587190.0, 587190.0 -1.54
KK/HlJ m 1518166.0 0.0   1   0.0 0.0 1518166.0, 1518166.0 1.36
LG/J m 727792.0 0.0   1   0.0 0.0 727792.0, 727792.0 -1.11
LP/J m 888633.0 0.0   1   0.0 0.0 888633.0, 888633.0 -0.6
MA/MyJ m 1591266.0 0.0   1   0.0 0.0 1591266.0, 1591266.0 1.59
NOD/ShiLtJ m 1309464.0 0.0   1   0.0 0.0 1309464.0, 1309464.0 0.71
NON/ShiLtJ m 1098804.0 0.0   1   0.0 0.0 1098804.0, 1098804.0 0.05
NZW/LacJ m 1321321.0 0.0   1   0.0 0.0 1321321.0, 1321321.0 0.75
PL/J m 1074676.0 0.0   1   0.0 0.0 1074676.0, 1074676.0 -0.02
RIIIS/J m 947904.0 0.0   1   0.0 0.0 947904.0, 947904.0 -0.42
SEA/GnJ m 1351733.0 0.0   1   0.0 0.0 1351733.0, 1351733.0 0.84
SJL/J m 1040010.0 0.0   1   0.0 0.0 1040010.0, 1040010.0 -0.13
SM/J m 1045402.0 0.0   1   0.0 0.0 1045402.0, 1045402.0 -0.11
SWR/J m 1094547.0 0.0   1   0.0 0.0 1094547.0, 1094547.0 0.04


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1038639.1 178515.2022 1401425.6395 675852.5605
AXB19b/PgnJ m 605844.65 178515.2022 968631.1895 243058.1105
AXB24/PgnJ m 1175191.8 178515.2022 1537978.3395 812405.2605
BALB/cJ m 936820.7667 145757.0523 1233034.7358 640606.7975
BXA16/PgnJ m 1192135.3 178515.2022 1554921.8395 829348.7605
BXD19/TyJ m 1115787.9 178515.2022 1478574.4395 753001.3605
BXD28/TyJ m 1138111.6 178515.2022 1500898.1395 775325.0605
BXH4/TyJ m 743023.85 178515.2022 1105810.3895 380237.3105
C3H/HeJ m 858256.45 178515.2022 1221042.9895 495469.9105
C57BL/6J m 1200014.4 112902.9272 1429460.7539 970568.0461
CXB11/HiAJ m 1021418.25 178515.2022 1384204.7895 658631.7105
CXB12/HiAJ m 1253430.75 178515.2022 1616217.2895 890644.2105
CXB13/HiAJ m 1049990.3 145757.0523 1346204.2691 753776.3309
CXB1/ByJ m 1027361.7333 145757.0523 1323575.7025 731147.7642
CXB2/ByJ m 1350461.2333 145757.0523 1646675.2025 1054247.2642
CXB3/ByJ m 1089444.9 178515.2022 1452231.4395 726658.3605
CXB4/ByJ m 1143240.25 178515.2022 1506026.7895 780453.7105
CXB6/ByJ m 817131.1667 145757.0523 1113345.1358 520917.1975
CXB7/ByJ m 981363.75 178515.2022 1344150.2895 618577.2105
CXB8/HiAJ m 1103266.2333 145757.0523 1399480.2025 807052.2642
CXB9/HiAJ m 1225680.1667 145757.0523 1521894.1358 929466.1975
DBA/2J m 1350281.75 126229.31 1606810.5722 1093752.9278




  GWAS USING LINEAR MIXED MODELS