Project measure / variable:   HMDPpheno8   arachidate

ID, description, units MPD:50353   arachidate   liver arachidate (20:0) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   96 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver arachidate (20:0) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested96 strains
Mean of the strain means53845   None
Median of the strain means47654   None
SD of the strain means± 34911
Coefficient of variation (CV)0.648
Min–max range of strain means24842   –   289801   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 169270283852.388 8060489707.2565 1.3505 0.2146
Residuals 33 196964051079.506 5968607608.4699


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 47223.0 0.0   1   0.0 0.0 47223.0, 47223.0 -0.19
A/J m 39812.0 17059.0   2   12063.0 0.428 27750.0, 51875.0 -0.4
AKR/J m 38420.0 0.0   1   0.0 0.0 38420.0, 38420.0 -0.44
AXB10/PgnJ m 42810.0 0.0   1   0.0 0.0 42810.0, 42810.0 -0.32
AXB12/PgnJ m 26726.0 0.0   1   0.0 0.0 26726.0, 26726.0 -0.78
AXB13/PgnJ m 37605.0 0.0   1   0.0 0.0 37605.0, 37605.0 -0.47
AXB19a/PgnJ m 49598.0 0.0   1   0.0 0.0 49598.0, 49598.0 -0.12
AXB19b/PgnJ m 40898.0 8995.0   2   6361.0 0.22 34537.0, 47259.0 -0.37
AXB19/PgnJ m 41233.0 0.0   1   0.0 0.0 41233.0, 41233.0 -0.36
AXB1/PgnJ m 81613.0 0.0   1   0.0 0.0 81613.0, 81613.0 0.8
AXB23/PgnJ m 47311.0 0.0   1   0.0 0.0 47311.0, 47311.0 -0.19
AXB24/PgnJ m 55865.0 19290.0   2   13640.0 0.345 42225.0, 69505.0 0.06
AXB2/PgnJ m 70533.0 0.0   1   0.0 0.0 70533.0, 70533.0 0.48
AXB4/PgnJ m 46224.0 0.0   1   0.0 0.0 46224.0, 46224.0 -0.22
AXB5/PgnJ m 32155.0 0.0   1   0.0 0.0 32155.0, 32155.0 -0.62
AXB6/PgnJ m 76207.0 0.0   1   0.0 0.0 76207.0, 76207.0 0.64
AXB8/PgnJ m 39716.0 0.0   1   0.0 0.0 39716.0, 39716.0 -0.4
BALB/cJ m 47026.0 425.0   3 245.0 0.00904 46662.0, 47494.0 -0.2
BTBR T+ Itpr3tf/J m 32060.0 0.0   1   0.0 0.0 32060.0, 32060.0 -0.62
BUB/BnJ m 55668.0 0.0   1   0.0 0.0 55668.0, 55668.0 0.05
BXA11/PgnJ m 61128.0 0.0   1   0.0 0.0 61128.0, 61128.0 0.21
BXA12/PgnJ m 42730.0 0.0   1   0.0 0.0 42730.0, 42730.0 -0.32
BXA13/PgnJ m 35027.0 0.0   1   0.0 0.0 35027.0, 35027.0 -0.54
BXA14/PgnJ m 54669.0 0.0   1   0.0 0.0 54669.0, 54669.0 0.02
BXA16/PgnJ m 26819.0 14186.0   2   10031.0 0.529 16788.0, 36850.0 -0.77
BXA1/PgnJ m 56074.0 0.0   1   0.0 0.0 56074.0, 56074.0 0.06
BXA24/PgnJ m 55592.0 0.0   1   0.0 0.0 55592.0, 55592.0 0.05
BXA25/PgnJ m 34094.0 0.0   1   0.0 0.0 34094.0, 34094.0 -0.57
BXA26/PgnJ m 37969.0 0.0   1   0.0 0.0 37969.0, 37969.0 -0.45
BXA2/PgnJ m 63058.0 0.0   1   0.0 0.0 63058.0, 63058.0 0.26
BXA7/PgnJ m 41666.0 0.0   1   0.0 0.0 41666.0, 41666.0 -0.35
BXA8/PgnJ m 57895.0 0.0   1   0.0 0.0 57895.0, 57895.0 0.12
BXD11/TyJ m 71952.0 0.0   1   0.0 0.0 71952.0, 71952.0 0.52
BXD12/TyJ m 48031.0 0.0   1   0.0 0.0 48031.0, 48031.0 -0.17
BXD13/TyJ m 56079.0 0.0   1   0.0 0.0 56079.0, 56079.0 0.06
BXD14/TyJ m 45922.0 0.0   1   0.0 0.0 45922.0, 45922.0 -0.23
BXD18/TyJ m 44728.0 0.0   1   0.0 0.0 44728.0, 44728.0 -0.26
BXD19/TyJ m 54631.0 9021.0   2   6378.0 0.165 48253.0, 61010.0 0.02
BXD1/TyJ m 39390.0 0.0   1   0.0 0.0 39390.0, 39390.0 -0.41
BXD20/TyJ m 43719.0 0.0   1   0.0 0.0 43719.0, 43719.0 -0.29
BXD21/TyJ m 39717.0 0.0   1   0.0 0.0 39717.0, 39717.0 -0.4
BXD22/TyJ m 24842.0 0.0   1   0.0 0.0 24842.0, 24842.0 -0.83
BXD24/TyJ m 48386.0 0.0   1   0.0 0.0 48386.0, 48386.0 -0.16
BXD28/TyJ m 47549.0 11370.0   2   8040.0 0.239 39509.0, 55588.0 -0.18
BXD29-Tlr4lps-2J/J m 60452.0 0.0   1   0.0 0.0 60452.0, 60452.0 0.19
BXD2/TyJ m 40811.0 0.0   1   0.0 0.0 40811.0, 40811.0 -0.37
BXD32/TyJ m 57158.0 0.0   1   0.0 0.0 57158.0, 57158.0 0.09
BXD33/TyJ m 60178.0 0.0   1   0.0 0.0 60178.0, 60178.0 0.18
BXD34/TyJ m 47943.0 0.0   1   0.0 0.0 47943.0, 47943.0 -0.17
BXD36/TyJ m 52078.0 0.0   1   0.0 0.0 52078.0, 52078.0 -0.05
BXD38/TyJ m 48044.0 0.0   1   0.0 0.0 48044.0, 48044.0 -0.17
BXD39/TyJ m 66147.0 0.0   1   0.0 0.0 66147.0, 66147.0 0.35
BXD40/TyJ m 56681.0 0.0   1   0.0 0.0 56681.0, 56681.0 0.08
BXD42/TyJ m 46623.0 0.0   1   0.0 0.0 46623.0, 46623.0 -0.21
BXD5/TyJ m 29477.0 0.0   1   0.0 0.0 29477.0, 29477.0 -0.7
BXD6/TyJ m 38417.0 0.0   1   0.0 0.0 38417.0, 38417.0 -0.44
BXD8/TyJ m 50193.0 0.0   1   0.0 0.0 50193.0, 50193.0 -0.1
BXD9/TyJ m 68004.0 0.0   1   0.0 0.0 68004.0, 68004.0 0.41
BXH10/TyJ m 45006.0 0.0   1   0.0 0.0 45006.0, 45006.0 -0.25
BXH20/KccJ m 47760.0 0.0   1   0.0 0.0 47760.0, 47760.0 -0.17
BXH22/KccJ m 45110.0 0.0   1   0.0 0.0 45110.0, 45110.0 -0.25
BXH2/TyJ m 35119.0 0.0   1   0.0 0.0 35119.0, 35119.0 -0.54
BXH4/TyJ m 44057.0 1511.0   2   1068.0 0.0343 42989.0, 45126.0 -0.28
BXH6/TyJ m 50686.0 0.0   1   0.0 0.0 50686.0, 50686.0 -0.09
BXH7/TyJ m 30120.0 0.0   1   0.0 0.0 30120.0, 30120.0 -0.68
BXH9/TyJ m 50058.0 0.0   1   0.0 0.0 50058.0, 50058.0 -0.11
C3H/HeJ m 53871.0 1638.0   2   1158.0 0.0304 52712.0, 55030.0 0.0
C57BL/6J m 60114.0 24790.0   5 11087.0 0.412 42980.0, 103666.0 0.18
C57L/J m 51750.0 0.0   1   0.0 0.0 51750.0, 51750.0 -0.06
C58/J m 77060.0 0.0   1   0.0 0.0 77060.0, 77060.0 0.66
CE/J m 41988.0 0.0   1   0.0 0.0 41988.0, 41988.0 -0.34
CXB11/HiAJ m 48095.0 7635.0   2   5398.0 0.159 42697.0, 53494.0 -0.16
CXB12/HiAJ m 67520.0 29019.0   2   20519.0 0.43 47001.0, 88040.0 0.39
CXB13/HiAJ m 55413.0 11677.0   2   8257.0 0.211 47156.0, 63669.0 0.04
CXB1/ByJ m 59828.0 10000.0   3 5774.0 0.167 48434.0, 67151.0 0.17
CXB2/ByJ m 53431.0 13104.0   3 7566.0 0.245 43542.0, 68294.0 -0.01
CXB3/ByJ m 64053.0 8183.0   2   5786.0 0.128 58266.0, 69839.0 0.29
CXB4/ByJ m 57697.0 9922.0   2   7016.0 0.172 50681.0, 64712.0 0.11
CXB6/ByJ m 102205.0 45737.0   3 26406.0 0.448 57371.0, 148795.0 1.39
CXB7/ByJ m 48910.0 22808.0   2   16128.0 0.466 32783.0, 65038.0 -0.14
CXB8/HiAJ m 47478.0 20410.0   3 11784.0 0.43 28601.0, 69136.0 -0.18
CXB9/HiAJ m 289801.0 304956.0   3 176067.0 1.05 79208.0, 639508.0 6.76
DBA/2J m 40816.0 4666.0   4 2333.0 0.114 35436.0, 46806.0 -0.37
FVB/NJ m 73536.0 0.0   1   0.0 0.0 73536.0, 73536.0 0.56
I/LnJ m 34553.0 0.0   1   0.0 0.0 34553.0, 34553.0 -0.55
KK/HlJ m 258092.0 0.0   1   0.0 0.0 258092.0, 258092.0 5.85
LG/J m 31317.0 0.0   1   0.0 0.0 31317.0, 31317.0 -0.65
LP/J m 30904.0 0.0   1   0.0 0.0 30904.0, 30904.0 -0.66
MA/MyJ m 46583.0 0.0   1   0.0 0.0 46583.0, 46583.0 -0.21
NOD/ShiLtJ m 41857.0 0.0   1   0.0 0.0 41857.0, 41857.0 -0.34
NON/ShiLtJ m 35782.0 0.0   1   0.0 0.0 35782.0, 35782.0 -0.52
PL/J m 44707.0 0.0   1   0.0 0.0 44707.0, 44707.0 -0.26
RIIIS/J m 36106.0 0.0   1   0.0 0.0 36106.0, 36106.0 -0.51
SEA/GnJ m 50374.0 0.0   1   0.0 0.0 50374.0, 50374.0 -0.1
SJL/J m 46141.0 0.0   1   0.0 0.0 46141.0, 46141.0 -0.22
SM/J m 68686.0 0.0   1   0.0 0.0 68686.0, 68686.0 0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 39812.45 54628.7818 150955.5423 0.0
AXB19b/PgnJ m 40897.95 54628.7818 152041.0423 0.0
AXB24/PgnJ m 55865.05 54628.7818 167008.1423 0.0
BALB/cJ m 47025.9 44604.2136 137773.8549 0.0
BXA16/PgnJ m 26818.75 54628.7818 137961.8423 0.0
BXD19/TyJ m 54631.4 54628.7818 165774.4923 0.0
BXD28/TyJ m 47548.75 54628.7818 158691.8423 0.0
BXH4/TyJ m 44057.4 54628.7818 155200.4923 0.0
C3H/HeJ m 53871.0 54628.7818 165014.0923 0.0
C57BL/6J m 60113.98 34550.2753 130407.0436 0.0
CXB11/HiAJ m 48095.35 54628.7818 159238.4423 0.0
CXB12/HiAJ m 67520.4 54628.7818 178663.4923 0.0
CXB13/HiAJ m 55412.55 54628.7818 166555.6423 0.0
CXB1/ByJ m 59827.9667 44604.2136 150575.9215 0.0
CXB2/ByJ m 53431.2 44604.2136 144179.1549 0.0
CXB3/ByJ m 64052.55 54628.7818 175195.6423 0.0
CXB4/ByJ m 57696.85 54628.7818 168839.9423 0.0
CXB6/ByJ m 102204.7 44604.2136 192952.6549 11456.7451
CXB7/ByJ m 48910.3 54628.7818 160053.3923 0.0
CXB8/HiAJ m 47477.6333 44604.2136 138225.5882 0.0
CXB9/HiAJ m 289801.2 44604.2136 380549.1549 199053.2451
DBA/2J m 40815.5 38628.3821 119405.5343 0.0




  GWAS USING LINEAR MIXED MODELS