Project measure / variable:   HMDPpheno8   myo_inositol

ID, description, units MPD:50350   myo_inositol   liver myo-inositol (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver myo-inositol (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means3841143   None
Median of the strain means3861310   None
SD of the strain means± 672361
Coefficient of variation (CV)0.175
Min–max range of strain means2387148   –   6347141   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 9620486659487.37 458118412356.542 1.5933 0.1106
Residuals 34 9776062557863.47 287531251701.867


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 3476158.0 0.0   1   0.0 0.0 3476158.0, 3476158.0 -0.54
A/J m 3151008.0 147080.0   2   104001.0 0.0467 3047008.0, 3255010.0 -1.03
AKR/J m 2878894.0 0.0   1   0.0 0.0 2878894.0, 2878894.0 -1.43
AXB10/PgnJ m 3796178.0 0.0   1   0.0 0.0 3796178.0, 3796178.0 -0.07
AXB12/PgnJ m 2743010.0 0.0   1   0.0 0.0 2743010.0, 2743010.0 -1.63
AXB13/PgnJ m 2942240.0 0.0   1   0.0 0.0 2942240.0, 2942240.0 -1.34
AXB15/PgnJ m 3080460.0 0.0   1   0.0 0.0 3080460.0, 3080460.0 -1.13
AXB19a/PgnJ m 3888737.0 0.0   1   0.0 0.0 3888737.0, 3888737.0 0.07
AXB19b/PgnJ m 4963341.0 32980.0   2   23320.0 0.00664 4940020.0, 4986662.0 1.67
AXB19/PgnJ m 4102675.0 0.0   1   0.0 0.0 4102675.0, 4102675.0 0.39
AXB1/PgnJ m 5386970.0 0.0   1   0.0 0.0 5386970.0, 5386970.0 2.3
AXB23/PgnJ m 3559738.0 0.0   1   0.0 0.0 3559738.0, 3559738.0 -0.42
AXB24/PgnJ m 4047427.0 860920.0   2   608762.0 0.213 3438665.0, 4656190.0 0.31
AXB2/PgnJ m 3987746.0 0.0   1   0.0 0.0 3987746.0, 3987746.0 0.22
AXB4/PgnJ m 4163570.0 0.0   1   0.0 0.0 4163570.0, 4163570.0 0.48
AXB5/PgnJ m 2392979.0 0.0   1   0.0 0.0 2392979.0, 2392979.0 -2.15
AXB6/PgnJ m 3291924.0 0.0   1   0.0 0.0 3291924.0, 3291924.0 -0.82
AXB8/PgnJ m 3095505.0 0.0   1   0.0 0.0 3095505.0, 3095505.0 -1.11
BALB/cJ m 4227966.0 400240.0   3 231079.0 0.0947 3862872.0, 4655915.0 0.58
BTBR T+ Itpr3tf/J m 3861701.0 0.0   1   0.0 0.0 3861701.0, 3861701.0 0.03
BUB/BnJ m 4286930.0 0.0   1   0.0 0.0 4286930.0, 4286930.0 0.66
BXA11/PgnJ m 3998128.0 0.0   1   0.0 0.0 3998128.0, 3998128.0 0.23
BXA12/PgnJ m 2433294.0 0.0   1   0.0 0.0 2433294.0, 2433294.0 -2.09
BXA13/PgnJ m 4322668.0 0.0   1   0.0 0.0 4322668.0, 4322668.0 0.72
BXA14/PgnJ m 4064854.0 0.0   1   0.0 0.0 4064854.0, 4064854.0 0.33
BXA16/PgnJ m 3641241.0 175121.0   2   123829.0 0.0481 3517412.0, 3765070.0 -0.3
BXA1/PgnJ m 3648059.0 0.0   1   0.0 0.0 3648059.0, 3648059.0 -0.29
BXA24/PgnJ m 4483197.0 0.0   1   0.0 0.0 4483197.0, 4483197.0 0.95
BXA25/PgnJ m 3379813.0 0.0   1   0.0 0.0 3379813.0, 3379813.0 -0.69
BXA26/PgnJ m 2657650.0 0.0   1   0.0 0.0 2657650.0, 2657650.0 -1.76
BXA2/PgnJ m 4273944.0 0.0   1   0.0 0.0 4273944.0, 4273944.0 0.64
BXA4/PgnJ m 2713506.0 0.0   1   0.0 0.0 2713506.0, 2713506.0 -1.68
BXA7/PgnJ m 3065315.0 0.0   1   0.0 0.0 3065315.0, 3065315.0 -1.15
BXA8/PgnJ m 3886743.0 0.0   1   0.0 0.0 3886743.0, 3886743.0 0.07
BXD11/TyJ m 4407272.0 0.0   1   0.0 0.0 4407272.0, 4407272.0 0.84
BXD12/TyJ m 4613418.0 0.0   1   0.0 0.0 4613418.0, 4613418.0 1.15
BXD13/TyJ m 4441362.0 0.0   1   0.0 0.0 4441362.0, 4441362.0 0.89
BXD14/TyJ m 3659020.0 0.0   1   0.0 0.0 3659020.0, 3659020.0 -0.27
BXD15/TyJ m 3571037.0 0.0   1   0.0 0.0 3571037.0, 3571037.0 -0.4
BXD18/TyJ m 3848540.0 0.0   1   0.0 0.0 3848540.0, 3848540.0 0.01
BXD19/TyJ m 3895322.0 143427.0   2   101418.0 0.0368 3793904.0, 3996740.0 0.08
BXD1/TyJ m 4163555.0 0.0   1   0.0 0.0 4163555.0, 4163555.0 0.48
BXD20/TyJ m 4211312.0 0.0   1   0.0 0.0 4211312.0, 4211312.0 0.55
BXD21/TyJ m 3444306.0 0.0   1   0.0 0.0 3444306.0, 3444306.0 -0.59
BXD22/TyJ m 3702861.0 0.0   1   0.0 0.0 3702861.0, 3702861.0 -0.21
BXD24/TyJ m 3691593.0 0.0   1   0.0 0.0 3691593.0, 3691593.0 -0.22
BXD24/TyJ-Cep290rd16/J m 4224234.0 0.0   1   0.0 0.0 4224234.0, 4224234.0 0.57
BXD28/TyJ m 3801897.0 11754.0   2   8311.0 0.00309 3793586.0, 3810208.0 -0.06
BXD29-Tlr4lps-2J/J m 6347141.0 0.0   1   0.0 0.0 6347141.0, 6347141.0 3.73
BXD2/TyJ m 5031570.0 0.0   1   0.0 0.0 5031570.0, 5031570.0 1.77
BXD32/TyJ m 4188450.0 0.0   1   0.0 0.0 4188450.0, 4188450.0 0.52
BXD33/TyJ m 4663906.0 0.0   1   0.0 0.0 4663906.0, 4663906.0 1.22
BXD34/TyJ m 3554512.0 0.0   1   0.0 0.0 3554512.0, 3554512.0 -0.43
BXD36/TyJ m 4026354.0 0.0   1   0.0 0.0 4026354.0, 4026354.0 0.28
BXD38/TyJ m 4701410.0 0.0   1   0.0 0.0 4701410.0, 4701410.0 1.28
BXD39/TyJ m 4485758.0 0.0   1   0.0 0.0 4485758.0, 4485758.0 0.96
BXD40/TyJ m 4461411.0 0.0   1   0.0 0.0 4461411.0, 4461411.0 0.92
BXD42/TyJ m 3895076.0 0.0   1   0.0 0.0 3895076.0, 3895076.0 0.08
BXD5/TyJ m 3380680.0 0.0   1   0.0 0.0 3380680.0, 3380680.0 -0.68
BXD6/TyJ m 3796959.0 0.0   1   0.0 0.0 3796959.0, 3796959.0 -0.07
BXD8/TyJ m 3176291.0 0.0   1   0.0 0.0 3176291.0, 3176291.0 -0.99
BXD9/TyJ m 3985425.0 0.0   1   0.0 0.0 3985425.0, 3985425.0 0.21
BXH10/TyJ m 3068740.0 0.0   1   0.0 0.0 3068740.0, 3068740.0 -1.15
BXH19/TyJ m 4081876.0 0.0   1   0.0 0.0 4081876.0, 4081876.0 0.36
BXH20/KccJ m 3955988.0 0.0   1   0.0 0.0 3955988.0, 3955988.0 0.17
BXH22/KccJ m 4404154.0 0.0   1   0.0 0.0 4404154.0, 4404154.0 0.84
BXH2/TyJ m 3512108.0 0.0   1   0.0 0.0 3512108.0, 3512108.0 -0.49
BXH4/TyJ m 3622936.0 376707.0   2   266372.0 0.104 3356564.0, 3889308.0 -0.32
BXH6/TyJ m 4439986.0 0.0   1   0.0 0.0 4439986.0, 4439986.0 0.89
BXH7/TyJ m 3813888.0 0.0   1   0.0 0.0 3813888.0, 3813888.0 -0.04
BXH8/TyJ m 3760095.0 0.0   1   0.0 0.0 3760095.0, 3760095.0 -0.12
BXH9/TyJ m 3973870.0 0.0   1   0.0 0.0 3973870.0, 3973870.0 0.2
C3H/HeJ m 4008189.0 1470993.0   2   1040149.0 0.367 2968040.0, 5048338.0 0.25
C57BL/6J m 4461048.0 282207.0   5 126207.0 0.0633 4047826.0, 4713638.0 0.92
C57L/J m 3875979.0 0.0   1   0.0 0.0 3875979.0, 3875979.0 0.05
C58/J m 6126578.0 0.0   1   0.0 0.0 6126578.0, 6126578.0 3.4
CAST/EiJ m 3086109.0 0.0   1   0.0 0.0 3086109.0, 3086109.0 -1.12
CBA/J m 2387148.0 0.0   1   0.0 0.0 2387148.0, 2387148.0 -2.16
CE/J m 3269504.0 0.0   1   0.0 0.0 3269504.0, 3269504.0 -0.85
CXB11/HiAJ m 3938538.0 1732392.0   2   1224986.0 0.44 2713552.0, 5163524.0 0.14
CXB12/HiAJ m 3872270.0 896534.0   2   633945.0 0.232 3238326.0, 4506216.0 0.05
CXB13/HiAJ m 3861702.0 631592.0   3 364650.0 0.164 3476153.0, 4590595.0 0.03
CXB1/ByJ m 3648667.0 410346.0   3 236913.0 0.112 3198301.0, 4001369.0 -0.29
CXB2/ByJ m 3430335.0 351778.0   3 203099.0 0.103 3093973.0, 3795729.0 -0.61
CXB3/ByJ m 4301804.0 24700.0   2   17465.0 0.00574 4284339.0, 4319270.0 0.69
CXB4/ByJ m 3093368.0 193043.0   2   136502.0 0.0624 2956866.0, 3229870.0 -1.11
CXB6/ByJ m 4064180.0 250794.0   3 144796.0 0.0617 3847670.0, 4338990.0 0.33
CXB7/ByJ m 3338396.0 11648.0   2   8236.0 0.00349 3330160.0, 3346632.0 -0.75
CXB8/HiAJ m 3913491.0 282257.0   3 162961.0 0.0721 3672476.0, 4224006.0 0.11
CXB9/HiAJ m 3404490.0 271238.0   3 156599.0 0.0797 3172170.0, 3702559.0 -0.65
DBA/2J m 4014863.0 345826.0   4 172913.0 0.0861 3626836.0, 4426478.0 0.26
FVB/NJ m 2987964.0 0.0   1   0.0 0.0 2987964.0, 2987964.0 -1.27
I/LnJ m 5268290.0 0.0   1   0.0 0.0 5268290.0, 5268290.0 2.12
KK/HlJ m 3639728.0 0.0   1   0.0 0.0 3639728.0, 3639728.0 -0.3
LG/J m 3747123.0 0.0   1   0.0 0.0 3747123.0, 3747123.0 -0.14
LP/J m 3658120.0 0.0   1   0.0 0.0 3658120.0, 3658120.0 -0.27
MA/MyJ m 3646882.0 0.0   1   0.0 0.0 3646882.0, 3646882.0 -0.29
NOD/ShiLtJ m 3282256.0 0.0   1   0.0 0.0 3282256.0, 3282256.0 -0.83
NON/ShiLtJ m 3589743.0 0.0   1   0.0 0.0 3589743.0, 3589743.0 -0.37
NZW/LacJ m 3162768.0 0.0   1   0.0 0.0 3162768.0, 3162768.0 -1.01
PL/J m 3730238.0 0.0   1   0.0 0.0 3730238.0, 3730238.0 -0.16
RIIIS/J m 3860920.0 0.0   1   0.0 0.0 3860920.0, 3860920.0 0.03
SEA/GnJ m 3651662.0 0.0   1   0.0 0.0 3651662.0, 3651662.0 -0.28
SJL/J m 3888964.0 0.0   1   0.0 0.0 3888964.0, 3888964.0 0.07
SM/J m 4074108.0 0.0   1   0.0 0.0 4074108.0, 4074108.0 0.35
SWR/J m 4977879.0 0.0   1   0.0 0.0 4977879.0, 4977879.0 1.69


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 3151008.5 379164.3784 3921563.2261 2380453.7739
AXB19b/PgnJ m 4963341.0 379164.3784 5733895.7261 4192786.2739
AXB24/PgnJ m 4047427.4 379164.3784 4817982.1261 3276872.6739
BALB/cJ m 4227965.9333 309586.4186 4857121.2326 3598810.634
BXA16/PgnJ m 3641241.0 379164.3784 4411795.7261 2870686.2739
BXD19/TyJ m 3895322.4 379164.3784 4665877.1261 3124767.6739
BXD28/TyJ m 3801897.15 379164.3784 4572451.8761 3031342.4239
BXH4/TyJ m 3622936.25 379164.3784 4393490.9761 2852381.5239
C3H/HeJ m 4008189.15 379164.3784 4778743.8761 3237634.4239
C57BL/6J m 4461047.6 239804.6087 4948389.1993 3973706.0007
CXB11/HiAJ m 3938538.4 379164.3784 4709093.1261 3167983.6739
CXB12/HiAJ m 3872270.5 379164.3784 4642825.2261 3101715.7739
CXB13/HiAJ m 3861702.1667 309586.4186 4490857.466 3232546.8674
CXB1/ByJ m 3648667.4333 309586.4186 4277822.7326 3019512.134
CXB2/ByJ m 3430334.7667 309586.4186 4059490.066 2801179.4674
CXB3/ByJ m 4301804.25 379164.3784 5072358.9761 3531249.5239
CXB4/ByJ m 3093367.65 379164.3784 3863922.3761 2322812.9239
CXB6/ByJ m 4064179.6 309586.4186 4693334.8993 3435024.3007
CXB7/ByJ m 3338396.25 379164.3784 4108950.9761 2567841.5239
CXB8/HiAJ m 3913491.2 309586.4186 4542646.4993 3284335.9007
CXB9/HiAJ m 3404490.1 309586.4186 4033645.3993 2775334.8007
DBA/2J m 4014862.825 268109.7032 4559727.2971 3469998.3529




  GWAS USING LINEAR MIXED MODELS