Phenotype measure:   HMDPpheno8   I2P

ID, description, units MPD:50349   I2P   liver inositol 2-phosphate (I2P) (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   102 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver inositol 2-phosphate (I2P) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested102 strains
Mean of the strain means69122   None
Median of the strain means65802   None
SD of the strain means± 25117
Coefficient of variation (CV)0.363
Min–max range of strain means30693   –   153687   None
Mean sample size per strain1.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 9843815095.6544 656254339.7103 0.9361 0.5413
Residuals 24 16825344957.5733 701056039.8989


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 65483.0 0.0   1   0.0 0.0 65483.0, 65483.0 -0.14
A/J m 33046.0 0.0   1   0.0 0.0 33046.0, 33046.0 -1.44
AKR/J m 72638.0 0.0   1   0.0 0.0 72638.0, 72638.0 0.14
AXB10/PgnJ m 32692.0 0.0   1   0.0 0.0 32692.0, 32692.0 -1.45
AXB12/PgnJ m 61406.0 0.0   1   0.0 0.0 61406.0, 61406.0 -0.31
AXB13/PgnJ m 40800.0 0.0   1   0.0 0.0 40800.0, 40800.0 -1.13
AXB15/PgnJ m 56080.0 0.0   1   0.0 0.0 56080.0, 56080.0 -0.52
AXB19a/PgnJ m 87380.0 0.0   1   0.0 0.0 87380.0, 87380.0 0.73
AXB19b/PgnJ m 73004.0 23650.0   2   16723.0 0.324 56282.0, 89727.0 0.15
AXB19/PgnJ m 41321.0 0.0   1   0.0 0.0 41321.0, 41321.0 -1.11
AXB1/PgnJ m 56404.0 0.0   1   0.0 0.0 56404.0, 56404.0 -0.51
AXB23/PgnJ m 84175.0 0.0   1   0.0 0.0 84175.0, 84175.0 0.6
AXB24/PgnJ m 71260.0 8121.0   2   5743.0 0.114 65517.0, 77003.0 0.09
AXB2/PgnJ m 84588.0 0.0   1   0.0 0.0 84588.0, 84588.0 0.62
AXB4/PgnJ m 52839.0 0.0   1   0.0 0.0 52839.0, 52839.0 -0.65
AXB5/PgnJ m 52962.0 0.0   1   0.0 0.0 52962.0, 52962.0 -0.64
AXB6/PgnJ m 38312.0 0.0   1   0.0 0.0 38312.0, 38312.0 -1.23
AXB8/PgnJ m 75333.0 0.0   1   0.0 0.0 75333.0, 75333.0 0.25
BALB/cJ m 90375.0 9895.0   3 5713.0 0.109 81207.0, 100865.0 0.85
BTBR T+ Itpr3tf/J m 54473.0 0.0   1   0.0 0.0 54473.0, 54473.0 -0.58
BUB/BnJ m 42528.0 0.0   1   0.0 0.0 42528.0, 42528.0 -1.06
BXA11/PgnJ m 96673.0 0.0   1   0.0 0.0 96673.0, 96673.0 1.1
BXA12/PgnJ m 37527.0 0.0   1   0.0 0.0 37527.0, 37527.0 -1.26
BXA13/PgnJ m 112044.0 0.0   1   0.0 0.0 112044.0, 112044.0 1.71
BXA14/PgnJ m 60269.0 0.0   1   0.0 0.0 60269.0, 60269.0 -0.35
BXA16/PgnJ m 49415.0 0.0   1   0.0 0.0 49415.0, 49415.0 -0.78
BXA1/PgnJ m 66728.0 0.0   1   0.0 0.0 66728.0, 66728.0 -0.1
BXA24/PgnJ m 65802.0 0.0   1   0.0 0.0 65802.0, 65802.0 -0.13
BXA25/PgnJ m 40278.0 0.0   1   0.0 0.0 40278.0, 40278.0 -1.15
BXA26/PgnJ m 80930.0 0.0   1   0.0 0.0 80930.0, 80930.0 0.47
BXA2/PgnJ m 65802.0 0.0   1   0.0 0.0 65802.0, 65802.0 -0.13
BXA4/PgnJ m 39870.0 0.0   1   0.0 0.0 39870.0, 39870.0 -1.16
BXA8/PgnJ m 126766.0 0.0   1   0.0 0.0 126766.0, 126766.0 2.29
BXD11/TyJ m 46324.0 0.0   1   0.0 0.0 46324.0, 46324.0 -0.91
BXD12/TyJ m 115811.0 0.0   1   0.0 0.0 115811.0, 115811.0 1.86
BXD13/TyJ m 133197.0 0.0   1   0.0 0.0 133197.0, 133197.0 2.55
BXD14/TyJ m 70479.0 0.0   1   0.0 0.0 70479.0, 70479.0 0.05
BXD15/TyJ m 153687.0 0.0   1   0.0 0.0 153687.0, 153687.0 3.37
BXD18/TyJ m 115227.0 0.0   1   0.0 0.0 115227.0, 115227.0 1.84
BXD19/TyJ m 95975.0 31927.0   2   22576.0 0.333 73400.0, 118551.0 1.07
BXD20/TyJ m 54203.0 0.0   1   0.0 0.0 54203.0, 54203.0 -0.59
BXD21/TyJ m 60693.0 0.0   1   0.0 0.0 60693.0, 60693.0 -0.34
BXD22/TyJ m 63316.0 0.0   1   0.0 0.0 63316.0, 63316.0 -0.23
BXD24/TyJ m 87323.0 0.0   1   0.0 0.0 87323.0, 87323.0 0.72
BXD24/TyJ-Cep290rd16/J m 64065.0 0.0   1   0.0 0.0 64065.0, 64065.0 -0.2
BXD28/TyJ m 65965.0 112.0   2   79.1 0.0017 65886.0, 66044.0 -0.13
BXD29-Tlr4lps-2J/J m 49702.0 0.0   1   0.0 0.0 49702.0, 49702.0 -0.77
BXD2/TyJ m 80282.0 0.0   1   0.0 0.0 80282.0, 80282.0 0.44
BXD32/TyJ m 47104.0 0.0   1   0.0 0.0 47104.0, 47104.0 -0.88
BXD33/TyJ m 65894.0 0.0   1   0.0 0.0 65894.0, 65894.0 -0.13
BXD34/TyJ m 60418.0 0.0   1   0.0 0.0 60418.0, 60418.0 -0.35
BXD36/TyJ m 102581.0 0.0   1   0.0 0.0 102581.0, 102581.0 1.33
BXD38/TyJ m 69124.0 0.0   1   0.0 0.0 69124.0, 69124.0 0.0
BXD39/TyJ m 62902.0 0.0   1   0.0 0.0 62902.0, 62902.0 -0.25
BXD40/TyJ m 52874.0 0.0   1   0.0 0.0 52874.0, 52874.0 -0.65
BXD42/TyJ m 30693.0 0.0   1   0.0 0.0 30693.0, 30693.0 -1.53
BXD5/TyJ m 54665.0 0.0   1   0.0 0.0 54665.0, 54665.0 -0.58
BXD6/TyJ m 56294.0 0.0   1   0.0 0.0 56294.0, 56294.0 -0.51
BXD8/TyJ m 68377.0 0.0   1   0.0 0.0 68377.0, 68377.0 -0.03
BXD9/TyJ m 68234.0 0.0   1   0.0 0.0 68234.0, 68234.0 -0.04
BXH10/TyJ m 36544.0 0.0   1   0.0 0.0 36544.0, 36544.0 -1.3
BXH19/TyJ m 42026.0 0.0   1   0.0 0.0 42026.0, 42026.0 -1.08
BXH20/KccJ m 152428.0 0.0   1   0.0 0.0 152428.0, 152428.0 3.32
BXH22/KccJ m 55980.0 0.0   1   0.0 0.0 55980.0, 55980.0 -0.52
BXH2/TyJ m 70969.0 0.0   1   0.0 0.0 70969.0, 70969.0 0.07
BXH4/TyJ m 76745.0 15780.0   2   11158.0 0.206 65587.0, 87903.0 0.3
BXH6/TyJ m 52291.0 0.0   1   0.0 0.0 52291.0, 52291.0 -0.67
BXH7/TyJ m 47057.0 0.0   1   0.0 0.0 47057.0, 47057.0 -0.88
BXH8/TyJ m 65802.0 0.0   1   0.0 0.0 65802.0, 65802.0 -0.13
BXH9/TyJ m 91130.0 0.0   1   0.0 0.0 91130.0, 91130.0 0.88
C3H/HeJ m 73592.0 11018.0   2   7791.0 0.15 65802.0, 81383.0 0.18
C57BL/6J m 60151.0 15520.0   4 7760.0 0.258 39816.0, 76562.0 -0.36
C57L/J m 67568.0 0.0   1   0.0 0.0 67568.0, 67568.0 -0.06
C58/J m 37247.0 0.0   1   0.0 0.0 37247.0, 37247.0 -1.27
CAST/EiJ m 105041.0 0.0   1   0.0 0.0 105041.0, 105041.0 1.43
CBA/J m 68171.0 0.0   1   0.0 0.0 68171.0, 68171.0 -0.04
CE/J m 51395.0 0.0   1   0.0 0.0 51395.0, 51395.0 -0.71
CXB11/HiAJ m 38152.0 0.0   1   0.0 0.0 38152.0, 38152.0 -1.23
CXB12/HiAJ m 66964.0 60412.0   2   42718.0 0.902 24246.0, 109682.0 -0.09
CXB13/HiAJ m 111603.0 49377.0   3 28508.0 0.442 77977.0, 168291.0 1.69
CXB1/ByJ m 77582.0 15363.0   3 8870.0 0.198 65728.0, 94938.0 0.34
CXB2/ByJ m 53894.0 11510.0   3 6645.0 0.214 45881.0, 67084.0 -0.61
CXB3/ByJ m 74139.0 1306.0   2   924.0 0.0176 73215.0, 75063.0 0.2
CXB4/ByJ m 62095.0 0.0   1   0.0 0.0 62095.0, 62095.0 -0.28
CXB6/ByJ m 64163.0 0.0   1   0.0 0.0 64163.0, 64163.0 -0.2
CXB7/ByJ m 62420.0 0.0   1   0.0 0.0 62420.0, 62420.0 -0.27
CXB8/HiAJ m 77491.0 42665.0   3 24633.0 0.551 30710.0, 114259.0 0.33
CXB9/HiAJ m 47737.0 13627.0   2   9636.0 0.285 38102.0, 57373.0 -0.85
DBA/2J m 67229.0 20012.0   3 11554.0 0.298 53090.0, 90127.0 -0.08
FVB/NJ m 78091.0 0.0   1   0.0 0.0 78091.0, 78091.0 0.36
I/LnJ m 90333.0 0.0   1   0.0 0.0 90333.0, 90333.0 0.84
KK/HlJ m 68772.0 0.0   1   0.0 0.0 68772.0, 68772.0 -0.01
LG/J m 46358.0 0.0   1   0.0 0.0 46358.0, 46358.0 -0.91
LP/J m 52619.0 0.0   1   0.0 0.0 52619.0, 52619.0 -0.66
MA/MyJ m 105217.0 0.0   1   0.0 0.0 105217.0, 105217.0 1.44
NOD/ShiLtJ m 49947.0 0.0   1   0.0 0.0 49947.0, 49947.0 -0.76
NON/ShiLtJ m 47960.0 0.0   1   0.0 0.0 47960.0, 47960.0 -0.84
NZW/LacJ m 53506.0 0.0   1   0.0 0.0 53506.0, 53506.0 -0.62
RIIIS/J m 106782.0 0.0   1   0.0 0.0 106782.0, 106782.0 1.5
SJL/J m 96595.0 0.0   1   0.0 0.0 96595.0, 96595.0 1.09
SM/J m 83972.0 0.0   1   0.0 0.0 83972.0, 83972.0 0.59
SWR/J m 108107.0 0.0   1   0.0 0.0 108107.0, 108107.0 1.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB19b/PgnJ m 73004.35 18722.3935 111645.4711 34363.2289
AXB24/PgnJ m 71260.0 18722.3935 109901.1211 32618.8789
BALB/cJ m 90374.6667 15286.7703 121925.0099 58824.3234
BXD19/TyJ m 95975.45 18722.3935 134616.5711 57334.3289
BXD28/TyJ m 65964.8 18722.3935 104605.9211 27323.6789
BXH4/TyJ m 76744.7 18722.3935 115385.8211 38103.5789
C3H/HeJ m 73592.05 18722.3935 112233.1711 34950.9289
C57BL/6J m 60151.3 13238.7314 87474.6988 32827.9012
CXB12/HiAJ m 66964.4 18722.3935 105605.5211 28323.2789
CXB13/HiAJ m 111602.7333 15286.7703 143153.0766 80052.3901
CXB1/ByJ m 77581.7667 15286.7703 109132.1099 46031.4234
CXB2/ByJ m 53893.9333 15286.7703 85444.2766 22343.5901
CXB3/ByJ m 74138.95 18722.3935 112780.0711 35497.8289
CXB8/HiAJ m 77491.3 15286.7703 109041.6433 45940.9567
CXB9/HiAJ m 47737.1 18722.3935 86378.2211 9095.9789
DBA/2J m 67228.7667 15286.7703 98779.1099 35678.4234




  GWAS USING LINEAR MIXED MODELS