Phenotype measure:   HMDPpheno8   butyrylglycine

ID, description, units MPD:50329   butyrylglycine   butyrylglycine (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - butyrylglycine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means110305   None
Median of the strain means106665   None
SD of the strain means± 42653
Coefficient of variation (CV)0.387
Min–max range of strain means19264   –   240895   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 83667722825.181 3984177277.3896 2.2704 0.0162
Residuals 34 59663916596.3745 1754821076.364


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 85157.0 0.0   1   0.0 0.0 85157.0, 85157.0 -0.59
A/J m 142406.0 34008.0   2   24047.0 0.239 118359.0, 166454.0 0.75
AKR/J m 88502.0 0.0   1   0.0 0.0 88502.0, 88502.0 -0.51
AXB10/PgnJ m 115474.0 0.0   1   0.0 0.0 115474.0, 115474.0 0.12
AXB12/PgnJ m 56542.0 0.0   1   0.0 0.0 56542.0, 56542.0 -1.26
AXB13/PgnJ m 218357.0 0.0   1   0.0 0.0 218357.0, 218357.0 2.53
AXB15/PgnJ m 181167.0 0.0   1   0.0 0.0 181167.0, 181167.0 1.66
AXB19a/PgnJ m 135592.0 0.0   1   0.0 0.0 135592.0, 135592.0 0.59
AXB19b/PgnJ m 117431.0 7855.0   2   5554.0 0.0669 111877.0, 122986.0 0.17
AXB19/PgnJ m 189998.0 0.0   1   0.0 0.0 189998.0, 189998.0 1.87
AXB1/PgnJ m 52530.0 0.0   1   0.0 0.0 52530.0, 52530.0 -1.35
AXB23/PgnJ m 122616.0 0.0   1   0.0 0.0 122616.0, 122616.0 0.29
AXB24/PgnJ m 104548.0 6304.0   2   4458.0 0.0603 100090.0, 109005.0 -0.13
AXB2/PgnJ m 124217.0 0.0   1   0.0 0.0 124217.0, 124217.0 0.33
AXB4/PgnJ m 130264.0 0.0   1   0.0 0.0 130264.0, 130264.0 0.47
AXB5/PgnJ m 166234.0 0.0   1   0.0 0.0 166234.0, 166234.0 1.31
AXB6/PgnJ m 131237.0 0.0   1   0.0 0.0 131237.0, 131237.0 0.49
AXB8/PgnJ m 158636.0 0.0   1   0.0 0.0 158636.0, 158636.0 1.13
BALB/cJ m 105968.0 44548.0   3 25720.0 0.42 70583.0, 155994.0 -0.1
BTBR T+ Itpr3tf/J m 113713.0 0.0   1   0.0 0.0 113713.0, 113713.0 0.08
BUB/BnJ m 79355.0 0.0   1   0.0 0.0 79355.0, 79355.0 -0.73
BXA11/PgnJ m 112959.0 0.0   1   0.0 0.0 112959.0, 112959.0 0.06
BXA12/PgnJ m 218548.0 0.0   1   0.0 0.0 218548.0, 218548.0 2.54
BXA13/PgnJ m 106692.0 0.0   1   0.0 0.0 106692.0, 106692.0 -0.08
BXA14/PgnJ m 94431.0 0.0   1   0.0 0.0 94431.0, 94431.0 -0.37
BXA16/PgnJ m 111623.0 43727.0   2   30919.0 0.392 80703.0, 142542.0 0.03
BXA1/PgnJ m 165433.0 0.0   1   0.0 0.0 165433.0, 165433.0 1.29
BXA24/PgnJ m 136170.0 0.0   1   0.0 0.0 136170.0, 136170.0 0.61
BXA25/PgnJ m 93468.0 0.0   1   0.0 0.0 93468.0, 93468.0 -0.39
BXA26/PgnJ m 182978.0 0.0   1   0.0 0.0 182978.0, 182978.0 1.7
BXA2/PgnJ m 74180.0 0.0   1   0.0 0.0 74180.0, 74180.0 -0.85
BXA4/PgnJ m 212151.0 0.0   1   0.0 0.0 212151.0, 212151.0 2.39
BXA7/PgnJ m 82031.0 0.0   1   0.0 0.0 82031.0, 82031.0 -0.66
BXA8/PgnJ m 128307.0 0.0   1   0.0 0.0 128307.0, 128307.0 0.42
BXD11/TyJ m 93604.0 0.0   1   0.0 0.0 93604.0, 93604.0 -0.39
BXD12/TyJ m 136351.0 0.0   1   0.0 0.0 136351.0, 136351.0 0.61
BXD13/TyJ m 19264.0 0.0   1   0.0 0.0 19264.0, 19264.0 -2.13
BXD14/TyJ m 99621.0 0.0   1   0.0 0.0 99621.0, 99621.0 -0.25
BXD15/TyJ m 119490.0 0.0   1   0.0 0.0 119490.0, 119490.0 0.22
BXD18/TyJ m 99544.0 0.0   1   0.0 0.0 99544.0, 99544.0 -0.25
BXD19/TyJ m 112233.0 55800.0   2   39456.0 0.497 72777.0, 151690.0 0.05
BXD1/TyJ m 70549.0 0.0   1   0.0 0.0 70549.0, 70549.0 -0.93
BXD20/TyJ m 63863.0 0.0   1   0.0 0.0 63863.0, 63863.0 -1.09
BXD21/TyJ m 128418.0 0.0   1   0.0 0.0 128418.0, 128418.0 0.42
BXD22/TyJ m 68345.0 0.0   1   0.0 0.0 68345.0, 68345.0 -0.98
BXD24/TyJ m 81509.0 0.0   1   0.0 0.0 81509.0, 81509.0 -0.68
BXD24/TyJ-Cep290rd16/J m 70955.0 0.0   1   0.0 0.0 70955.0, 70955.0 -0.92
BXD28/TyJ m 113057.0 18554.0   2   13120.0 0.164 99938.0, 126177.0 0.06
BXD29-Tlr4lps-2J/J m 147353.0 0.0   1   0.0 0.0 147353.0, 147353.0 0.87
BXD2/TyJ m 121694.0 0.0   1   0.0 0.0 121694.0, 121694.0 0.27
BXD32/TyJ m 120679.0 0.0   1   0.0 0.0 120679.0, 120679.0 0.24
BXD33/TyJ m 99246.0 0.0   1   0.0 0.0 99246.0, 99246.0 -0.26
BXD34/TyJ m 39742.0 0.0   1   0.0 0.0 39742.0, 39742.0 -1.65
BXD36/TyJ m 80633.0 0.0   1   0.0 0.0 80633.0, 80633.0 -0.7
BXD38/TyJ m 89051.0 0.0   1   0.0 0.0 89051.0, 89051.0 -0.5
BXD39/TyJ m 76978.0 0.0   1   0.0 0.0 76978.0, 76978.0 -0.78
BXD40/TyJ m 101126.0 0.0   1   0.0 0.0 101126.0, 101126.0 -0.22
BXD42/TyJ m 110618.0 0.0   1   0.0 0.0 110618.0, 110618.0 0.01
BXD5/TyJ m 102584.0 0.0   1   0.0 0.0 102584.0, 102584.0 -0.18
BXD6/TyJ m 81774.0 0.0   1   0.0 0.0 81774.0, 81774.0 -0.67
BXD8/TyJ m 77643.0 0.0   1   0.0 0.0 77643.0, 77643.0 -0.77
BXD9/TyJ m 86418.0 0.0   1   0.0 0.0 86418.0, 86418.0 -0.56
BXH10/TyJ m 90475.0 0.0   1   0.0 0.0 90475.0, 90475.0 -0.46
BXH19/TyJ m 89275.0 0.0   1   0.0 0.0 89275.0, 89275.0 -0.49
BXH20/KccJ m 179748.0 0.0   1   0.0 0.0 179748.0, 179748.0 1.63
BXH22/KccJ m 110572.0 0.0   1   0.0 0.0 110572.0, 110572.0 0.01
BXH2/TyJ m 99320.0 0.0   1   0.0 0.0 99320.0, 99320.0 -0.26
BXH4/TyJ m 74016.0 13255.0   2   9373.0 0.179 64643.0, 83388.0 -0.85
BXH6/TyJ m 117822.0 0.0   1   0.0 0.0 117822.0, 117822.0 0.18
BXH7/TyJ m 64063.0 0.0   1   0.0 0.0 64063.0, 64063.0 -1.08
BXH8/TyJ m 108861.0 0.0   1   0.0 0.0 108861.0, 108861.0 -0.03
BXH9/TyJ m 74134.0 0.0   1   0.0 0.0 74134.0, 74134.0 -0.85
C3H/HeJ m 85252.0 38940.0   2   27535.0 0.457 57717.0, 112787.0 -0.59
C57BL/6J m 100647.0 28815.0   5 12887.0 0.286 70098.0, 136184.0 -0.23
C57L/J m 43677.0 0.0   1   0.0 0.0 43677.0, 43677.0 -1.56
C58/J m 65859.0 0.0   1   0.0 0.0 65859.0, 65859.0 -1.04
CAST/EiJ m 49569.0 0.0   1   0.0 0.0 49569.0, 49569.0 -1.42
CBA/J m 108907.0 0.0   1   0.0 0.0 108907.0, 108907.0 -0.03
CE/J m 119118.0 0.0   1   0.0 0.0 119118.0, 119118.0 0.21
CXB11/HiAJ m 117317.0 51167.0   2   36180.0 0.436 81136.0, 153497.0 0.16
CXB12/HiAJ m 174492.0 70610.0   2   49929.0 0.405 124563.0, 224421.0 1.5
CXB13/HiAJ m 186491.0 44566.0   3 25730.0 0.239 135052.0, 213497.0 1.79
CXB1/ByJ m 176065.0 56826.0   3 32809.0 0.323 110995.0, 215926.0 1.54
CXB2/ByJ m 152889.0 65587.0   3 37866.0 0.429 81074.0, 209618.0 1.0
CXB3/ByJ m 240895.0 97553.0   2   68980.0 0.405 171915.0, 309875.0 3.06
CXB4/ByJ m 149370.0 45665.0   2   32290.0 0.306 117080.0, 181659.0 0.92
CXB6/ByJ m 131576.0 19124.0   3 11041.0 0.145 116218.0, 152997.0 0.5
CXB7/ByJ m 168192.0 9080.0   2   6421.0 0.054 161771.0, 174613.0 1.36
CXB8/HiAJ m 166656.0 22232.0   3 12836.0 0.133 141062.0, 181173.0 1.32
CXB9/HiAJ m 131790.0 38786.0   3 22393.0 0.294 87009.0, 154798.0 0.5
DBA/2J m 80713.0 18285.0   4 9142.0 0.227 63773.0, 106520.0 -0.69
FVB/NJ m 48859.0 0.0   1   0.0 0.0 48859.0, 48859.0 -1.44
I/LnJ m 126324.0 0.0   1   0.0 0.0 126324.0, 126324.0 0.38
KK/HlJ m 80748.0 0.0   1   0.0 0.0 80748.0, 80748.0 -0.69
LG/J m 68966.0 0.0   1   0.0 0.0 68966.0, 68966.0 -0.97
LP/J m 110474.0 0.0   1   0.0 0.0 110474.0, 110474.0 0.0
MA/MyJ m 68015.0 0.0   1   0.0 0.0 68015.0, 68015.0 -0.99
NOD/ShiLtJ m 106638.0 0.0   1   0.0 0.0 106638.0, 106638.0 -0.09
NON/ShiLtJ m 136072.0 0.0   1   0.0 0.0 136072.0, 136072.0 0.6
NZW/LacJ m 57258.0 0.0   1   0.0 0.0 57258.0, 57258.0 -1.24
PL/J m 87723.0 0.0   1   0.0 0.0 87723.0, 87723.0 -0.53
RIIIS/J m 27909.0 0.0   1   0.0 0.0 27909.0, 27909.0 -1.93
SEA/GnJ m 124009.0 0.0   1   0.0 0.0 124009.0, 124009.0 0.32
SJL/J m 105427.0 0.0   1   0.0 0.0 105427.0, 105427.0 -0.11
SM/J m 62433.0 0.0   1   0.0 0.0 62433.0, 62433.0 -1.12
SWR/J m 72474.0 0.0   1   0.0 0.0 72474.0, 72474.0 -0.89


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 142406.4 29621.1164 202603.7512 82209.0488
AXB19b/PgnJ m 117431.2 29621.1164 177628.5512 57233.8488
AXB24/PgnJ m 104547.65 29621.1164 164745.0012 44350.2988
BALB/cJ m 105968.4667 24185.5403 155119.3981 56817.5352
BXA16/PgnJ m 111622.7 29621.1164 171820.0512 51425.3488
BXD19/TyJ m 112233.4 29621.1164 172430.7512 52036.0488
BXD28/TyJ m 113057.45 29621.1164 173254.8012 52860.0988
BXH4/TyJ m 74015.65 29621.1164 134213.0012 13818.2988
C3H/HeJ m 85252.0 29621.1164 145449.3512 25054.6488
C57BL/6J m 100647.04 18734.0389 138719.1878 62574.8922
CXB11/HiAJ m 117316.8 29621.1164 177514.1512 57119.4488
CXB12/HiAJ m 174492.05 29621.1164 234689.4012 114294.6988
CXB13/HiAJ m 186490.8333 24185.5403 235641.7648 137339.9019
CXB1/ByJ m 176064.8667 24185.5403 225215.7981 126913.9352
CXB2/ByJ m 152888.6 24185.5403 202039.5314 103737.6686
CXB3/ByJ m 240894.65 29621.1164 301092.0012 180697.2988
CXB4/ByJ m 149369.55 29621.1164 209566.9012 89172.1988
CXB6/ByJ m 131576.3333 24185.5403 180727.2648 82425.4019
CXB7/ByJ m 168191.85 29621.1164 228389.2012 107994.4988
CXB8/HiAJ m 166656.0333 24185.5403 215806.9648 117505.1019
CXB9/HiAJ m 131790.1667 24185.5403 180941.0981 82639.2352
DBA/2J m 80713.225 20945.2923 123279.1803 38147.2697




  GWAS USING LINEAR MIXED MODELS