Project measure / variable:   HMDPpheno7   thiamin

ID, description, units MPD:50238   thiamin   thiamin (Vitamin B1) (16h fast), relative abundance    
Data set, strains HMDPpheno7   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno7 - thiamin (Vitamin B1) (16h fast), relative abundance

BXA1/PgnJBXH20/KccJBXD14/TyJCAST/EiJBXH6/TyJAXB10/PgnJBXD39/TyJAXB19/PgnJBXH4/TyJBXA14/PgnJBXA8/PgnJBXA24/PgnJAXB13/PgnJBXD40/TyJAXB15/PgnJNZW/LacJCXB3/ByJAXB19b/PgnJSEA/GnJBXD5/TyJBXD19/TyJCXB11/HiAJAXB8/PgnJCXB9/HiAJPL/JBXD9/TyJBXA11/PgnJBXD13/TyJBXH10/TyJBXH8/TyJCXB4/ByJBXH22/KccJBXA2/PgnJC3H/HeJAXB6/PgnJA/JBXD38/TyJKK/HlJNON/ShiLtJCXB1/ByJBXD11/TyJCBA/JBXD36/TyJAXB12/PgnJAKR/JCXB7/ByJCXB8/HiAJBXD2/TyJAXB24/PgnJBTBR T<+> Itpr3<tf>/JBXD28/TyJBXD32/TyJBXD6/TyJBXA13/PgnJBXA7/PgnJBXD34/TyJ129X1/SvJBXA16/PgnJBXH19/TyJDBA/2JBXH2/TyJBXD24/TyJSWR/JBXD42/TyJC57BL/6JSM/JBXD12/TyJBALB/cJCXB12/HiAJBXD1/TyJBXD29-Tlr4<lps-2J>/JLG/JAXB5/PgnJAXB23/PgnJBXD20/TyJAXB19a/PgnJCE/JBXA25/PgnJRIIIS/JC58/JI/LnJCXB6/ByJCXB2/ByJMA/MyJCXB13/HiAJBXD33/TyJBXA26/PgnJSJL/JBXD18/TyJBXH9/TyJBXD21/TyJAXB1/PgnJBXD24/TyJ-Cep290<rd16>/JNOD/ShiLtJBXH7/TyJC57L/JAXB2/PgnJBXD22/TyJLP/JAXB4/PgnJBUB/BnJBXA4/PgnJBXD15/TyJBXD8/TyJFVB/NJBXA12/PgnJ (no units) 60,00080,000100,000120,000140,000160,000180,000200,000220,000240,000260,000280,000300,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means141763   None
Median of the strain means136224   None
SD of the strain means± 38507
Coefficient of variation (CV)0.272
Min–max range of strain means65619   –   291469   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 33531134784.2049 1596720704.0098 1.5927 0.1108
Residuals 34 34086720121.9663 1002550591.8225


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 133965.0 0.0   1   0.0 0.0 133965.0, 133965.0 -0.2
A/J m 155033.0 49285.0   2   34850.0 0.318 120183.0, 189883.0 0.34
AKR/J m 142032.0 0.0   1   0.0 0.0 142032.0, 142032.0 0.01
AXB10/PgnJ m 203360.0 0.0   1   0.0 0.0 203360.0, 203360.0 1.6
AXB12/PgnJ m 143841.0 0.0   1   0.0 0.0 143841.0, 143841.0 0.05
AXB13/PgnJ m 190589.0 0.0   1   0.0 0.0 190589.0, 190589.0 1.27
AXB15/PgnJ m 188524.0 0.0   1   0.0 0.0 188524.0, 188524.0 1.21
AXB19a/PgnJ m 119054.0 0.0   1   0.0 0.0 119054.0, 119054.0 -0.59
AXB19b/PgnJ m 181439.0 51246.0   2   36237.0 0.282 145203.0, 217676.0 1.03
AXB19/PgnJ m 202525.0 0.0   1   0.0 0.0 202525.0, 202525.0 1.58
AXB1/PgnJ m 100050.0 0.0   1   0.0 0.0 100050.0, 100050.0 -1.08
AXB23/PgnJ m 120097.0 0.0   1   0.0 0.0 120097.0, 120097.0 -0.56
AXB24/PgnJ m 138978.0 58559.0   2   41408.0 0.421 97570.0, 180385.0 -0.07
AXB2/PgnJ m 93534.0 0.0   1   0.0 0.0 93534.0, 93534.0 -1.25
AXB4/PgnJ m 87218.0 0.0   1   0.0 0.0 87218.0, 87218.0 -1.42
AXB5/PgnJ m 120746.0 0.0   1   0.0 0.0 120746.0, 120746.0 -0.55
AXB6/PgnJ m 155094.0 0.0   1   0.0 0.0 155094.0, 155094.0 0.35
AXB8/PgnJ m 175848.0 0.0   1   0.0 0.0 175848.0, 175848.0 0.89
BALB/cJ m 125026.0 21590.0   3 12465.0 0.173 106757.0, 148851.0 -0.43
BTBR T+ Itpr3tf/J m 138916.0 0.0   1   0.0 0.0 138916.0, 138916.0 -0.07
BUB/BnJ m 86980.0 0.0   1   0.0 0.0 86980.0, 86980.0 -1.42
BXA11/PgnJ m 167209.0 0.0   1   0.0 0.0 167209.0, 167209.0 0.66
BXA12/PgnJ m 65619.0 0.0   1   0.0 0.0 65619.0, 65619.0 -1.98
BXA13/PgnJ m 136033.0 0.0   1   0.0 0.0 136033.0, 136033.0 -0.15
BXA14/PgnJ m 197611.0 0.0   1   0.0 0.0 197611.0, 197611.0 1.45
BXA16/PgnJ m 133439.0 56588.0   2   40014.0 0.424 93425.0, 173452.0 -0.22
BXA1/PgnJ m 291469.0 0.0   1   0.0 0.0 291469.0, 291469.0 3.89
BXA24/PgnJ m 191334.0 0.0   1   0.0 0.0 191334.0, 191334.0 1.29
BXA25/PgnJ m 117887.0 0.0   1   0.0 0.0 117887.0, 117887.0 -0.62
BXA26/PgnJ m 111516.0 0.0   1   0.0 0.0 111516.0, 111516.0 -0.79
BXA2/PgnJ m 159574.0 0.0   1   0.0 0.0 159574.0, 159574.0 0.46
BXA4/PgnJ m 82816.0 0.0   1   0.0 0.0 82816.0, 82816.0 -1.53
BXA7/PgnJ m 135749.0 0.0   1   0.0 0.0 135749.0, 135749.0 -0.16
BXA8/PgnJ m 195623.0 0.0   1   0.0 0.0 195623.0, 195623.0 1.4
BXD11/TyJ m 146548.0 0.0   1   0.0 0.0 146548.0, 146548.0 0.12
BXD12/TyJ m 125083.0 0.0   1   0.0 0.0 125083.0, 125083.0 -0.43
BXD13/TyJ m 166662.0 0.0   1   0.0 0.0 166662.0, 166662.0 0.65
BXD14/TyJ m 209140.0 0.0   1   0.0 0.0 209140.0, 209140.0 1.75
BXD15/TyJ m 82432.0 0.0   1   0.0 0.0 82432.0, 82432.0 -1.54
BXD18/TyJ m 108399.0 0.0   1   0.0 0.0 108399.0, 108399.0 -0.87
BXD19/TyJ m 177808.0 145.0   2   103.0 0.000816 177705.0, 177911.0 0.94
BXD1/TyJ m 124394.0 0.0   1   0.0 0.0 124394.0, 124394.0 -0.45
BXD20/TyJ m 119298.0 0.0   1   0.0 0.0 119298.0, 119298.0 -0.58
BXD21/TyJ m 105608.0 0.0   1   0.0 0.0 105608.0, 105608.0 -0.94
BXD22/TyJ m 92081.0 0.0   1   0.0 0.0 92081.0, 92081.0 -1.29
BXD24/TyJ m 129474.0 0.0   1   0.0 0.0 129474.0, 129474.0 -0.32
BXD24/TyJ-Cep290rd16/J m 99076.0 0.0   1   0.0 0.0 99076.0, 99076.0 -1.11
BXD28/TyJ m 138850.0 1579.0   2   1116.0 0.0114 137734.0, 139967.0 -0.08
BXD29-Tlr4lps-2J/J m 122766.0 0.0   1   0.0 0.0 122766.0, 122766.0 -0.49
BXD2/TyJ m 139989.0 0.0   1   0.0 0.0 139989.0, 139989.0 -0.05
BXD32/TyJ m 137757.0 0.0   1   0.0 0.0 137757.0, 137757.0 -0.1
BXD33/TyJ m 111870.0 0.0   1   0.0 0.0 111870.0, 111870.0 -0.78
BXD34/TyJ m 135468.0 0.0   1   0.0 0.0 135468.0, 135468.0 -0.16
BXD36/TyJ m 145266.0 0.0   1   0.0 0.0 145266.0, 145266.0 0.09
BXD38/TyJ m 148914.0 0.0   1   0.0 0.0 148914.0, 148914.0 0.19
BXD39/TyJ m 203348.0 0.0   1   0.0 0.0 203348.0, 203348.0 1.6
BXD40/TyJ m 189199.0 0.0   1   0.0 0.0 189199.0, 189199.0 1.23
BXD42/TyJ m 128501.0 0.0   1   0.0 0.0 128501.0, 128501.0 -0.34
BXD5/TyJ m 179202.0 0.0   1   0.0 0.0 179202.0, 179202.0 0.97
BXD6/TyJ m 136415.0 0.0   1   0.0 0.0 136415.0, 136415.0 -0.14
BXD8/TyJ m 70328.0 0.0   1   0.0 0.0 70328.0, 70328.0 -1.86
BXD9/TyJ m 174392.0 0.0   1   0.0 0.0 174392.0, 174392.0 0.85
BXH10/TyJ m 164092.0 0.0   1   0.0 0.0 164092.0, 164092.0 0.58
BXH19/TyJ m 132847.0 0.0   1   0.0 0.0 132847.0, 132847.0 -0.23
BXH20/KccJ m 222929.0 0.0   1   0.0 0.0 222929.0, 222929.0 2.11
BXH22/KccJ m 159850.0 0.0   1   0.0 0.0 159850.0, 159850.0 0.47
BXH2/TyJ m 129918.0 0.0   1   0.0 0.0 129918.0, 129918.0 -0.31
BXH4/TyJ m 201000.0 13809.0   2   9764.0 0.0687 191236.0, 210765.0 1.54
BXH6/TyJ m 204751.0 0.0   1   0.0 0.0 204751.0, 204751.0 1.64
BXH7/TyJ m 96199.0 0.0   1   0.0 0.0 96199.0, 96199.0 -1.18
BXH8/TyJ m 161950.0 0.0   1   0.0 0.0 161950.0, 161950.0 0.52
BXH9/TyJ m 107974.0 0.0   1   0.0 0.0 107974.0, 107974.0 -0.88
C3H/HeJ m 155610.0 27263.0   2   19278.0 0.175 136331.0, 174888.0 0.36
C57BL/6J m 127099.0 18596.0   5 8316.0 0.146 97456.0, 143440.0 -0.38
C57L/J m 95199.0 0.0   1   0.0 0.0 95199.0, 95199.0 -1.21
C58/J m 116974.0 0.0   1   0.0 0.0 116974.0, 116974.0 -0.64
CAST/EiJ m 208796.0 0.0   1   0.0 0.0 208796.0, 208796.0 1.74
CBA/J m 145311.0 0.0   1   0.0 0.0 145311.0, 145311.0 0.09
CE/J m 117977.0 0.0   1   0.0 0.0 117977.0, 117977.0 -0.62
CXB11/HiAJ m 176936.0 63434.0   2   44854.0 0.359 132082.0, 221791.0 0.91
CXB12/HiAJ m 125012.0 27537.0   2   19472.0 0.22 105540.0, 144484.0 -0.44
CXB13/HiAJ m 112036.0 32610.0   3 18828.0 0.291 88906.0, 149334.0 -0.77
CXB1/ByJ m 148015.0 37394.0   3 21589.0 0.253 116085.0, 189153.0 0.16
CXB2/ByJ m 112232.0 40447.0   3 23352.0 0.36 65911.0, 140559.0 -0.77
CXB3/ByJ m 182401.0 26816.0   2   18962.0 0.147 163440.0, 201363.0 1.06
CXB4/ByJ m 160850.0 123.0   2   86.9 0.000764 160763.0, 160936.0 0.5
CXB6/ByJ m 114628.0 27777.0   3 16037.0 0.242 90332.0, 144910.0 -0.7
CXB7/ByJ m 141351.0 58.9   2   41.7 0.000417 141309.0, 141392.0 -0.01
CXB8/HiAJ m 141119.0 20394.0   3 11775.0 0.145 118036.0, 156701.0 -0.02
CXB9/HiAJ m 175156.0 19514.0   3 11266.0 0.111 157758.0, 196255.0 0.87
DBA/2J m 132618.0 27778.0   4 13889.0 0.209 104602.0, 163450.0 -0.24
FVB/NJ m 68751.0 0.0   1   0.0 0.0 68751.0, 68751.0 -1.9
I/LnJ m 114897.0 0.0   1   0.0 0.0 114897.0, 114897.0 -0.7
KK/HlJ m 148774.0 0.0   1   0.0 0.0 148774.0, 148774.0 0.18
LG/J m 122345.0 0.0   1   0.0 0.0 122345.0, 122345.0 -0.5
LP/J m 87396.0 0.0   1   0.0 0.0 87396.0, 87396.0 -1.41
MA/MyJ m 112173.0 0.0   1   0.0 0.0 112173.0, 112173.0 -0.77
NOD/ShiLtJ m 96793.0 0.0   1   0.0 0.0 96793.0, 96793.0 -1.17
NON/ShiLtJ m 148240.0 0.0   1   0.0 0.0 148240.0, 148240.0 0.17
NZW/LacJ m 183172.0 0.0   1   0.0 0.0 183172.0, 183172.0 1.08
PL/J m 174418.0 0.0   1   0.0 0.0 174418.0, 174418.0 0.85
RIIIS/J m 117689.0 0.0   1   0.0 0.0 117689.0, 117689.0 -0.63
SEA/GnJ m 179482.0 0.0   1   0.0 0.0 179482.0, 179482.0 0.98
SJL/J m 110685.0 0.0   1   0.0 0.0 110685.0, 110685.0 -0.81
SM/J m 125639.0 0.0   1   0.0 0.0 125639.0, 125639.0 -0.42
SWR/J m 128614.0 0.0   1   0.0 0.0 128614.0, 128614.0 -0.34


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 155032.7 22389.1781 200532.9843 109532.4157
AXB19b/PgnJ m 181439.2 22389.1781 226939.4843 135938.9157
AXB24/PgnJ m 138977.5 22389.1781 184477.7843 93477.2157
BALB/cJ m 125025.8667 18280.6874 162176.6932 87875.0401
BXA16/PgnJ m 133438.95 22389.1781 178939.2343 87938.6657
BXD19/TyJ m 177807.95 22389.1781 223308.2343 132307.6657
BXD28/TyJ m 138850.4 22389.1781 184350.6843 93350.1157
BXH4/TyJ m 201000.35 22389.1781 246500.6343 155500.0657
C3H/HeJ m 155609.55 22389.1781 201109.8343 110109.2657
C57BL/6J m 127099.18 14160.1595 155876.0865 98322.2735
CXB11/HiAJ m 176936.4 22389.1781 222436.6843 131436.1157
CXB12/HiAJ m 125012.05 22389.1781 170512.3343 79511.7657
CXB13/HiAJ m 112035.7 18280.6874 149186.5265 74884.8735
CXB1/ByJ m 148015.0667 18280.6874 185165.8932 110864.2401
CXB2/ByJ m 112232.5 18280.6874 149383.3265 75081.6735
CXB3/ByJ m 182401.35 22389.1781 227901.6343 136901.0657
CXB4/ByJ m 160849.5 22389.1781 206349.7843 115349.2157
CXB6/ByJ m 114627.8 18280.6874 151778.6265 77476.9735
CXB7/ByJ m 141350.55 22389.1781 186850.8343 95850.2657
CXB8/HiAJ m 141118.5 18280.6874 178269.3265 103967.6735
CXB9/HiAJ m 175155.8 18280.6874 212306.6265 138004.9735
DBA/2J m 132618.45 15831.5397 164792.0095 100444.8905




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