Project measure / variable:   HMDPpheno7   FMN

ID, description, units MPD:50237   FMN   flavin mononucleotide (FMN) (16h fast), relative abundance    
Data set, strains HMDPpheno7   HMDP   105 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno7 - flavin mononucleotide (FMN) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested105 strains
Mean of the strain means6867   None
Median of the strain means6994   None
SD of the strain means± 1109
Coefficient of variation (CV)0.162
Min–max range of strain means3936   –   9786   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 29459720.6558 1402843.8408 2.6946 0.0049
Residuals 34 17700595.7463 520605.7572


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 7687.0 0.0   1   0.0 0.0 7687.0, 7687.0 0.74
A/J m 7007.0 867.0   2   613.0 0.124 6394.0, 7620.0 0.13
AKR/J m 6775.0 0.0   1   0.0 0.0 6775.0, 6775.0 -0.08
AXB10/PgnJ m 7006.0 0.0   1   0.0 0.0 7006.0, 7006.0 0.13
AXB12/PgnJ m 5980.0 0.0   1   0.0 0.0 5980.0, 5980.0 -0.8
AXB13/PgnJ m 6471.0 0.0   1   0.0 0.0 6471.0, 6471.0 -0.36
AXB15/PgnJ m 5241.0 0.0   1   0.0 0.0 5241.0, 5241.0 -1.47
AXB19a/PgnJ m 6154.0 0.0   1   0.0 0.0 6154.0, 6154.0 -0.64
AXB19b/PgnJ m 8368.0 327.0   2   231.0 0.0391 8137.0, 8600.0 1.35
AXB19/PgnJ m 8694.0 0.0   1   0.0 0.0 8694.0, 8694.0 1.65
AXB1/PgnJ m 6188.0 0.0   1   0.0 0.0 6188.0, 6188.0 -0.61
AXB23/PgnJ m 7196.0 0.0   1   0.0 0.0 7196.0, 7196.0 0.3
AXB24/PgnJ m 6212.0 115.0   2   81.2 0.0185 6131.0, 6293.0 -0.59
AXB2/PgnJ m 8164.0 0.0   1   0.0 0.0 8164.0, 8164.0 1.17
AXB4/PgnJ m 7384.0 0.0   1   0.0 0.0 7384.0, 7384.0 0.47
AXB5/PgnJ m 6758.0 0.0   1   0.0 0.0 6758.0, 6758.0 -0.1
AXB6/PgnJ m 7751.0 0.0   1   0.0 0.0 7751.0, 7751.0 0.8
AXB8/PgnJ m 7337.0 0.0   1   0.0 0.0 7337.0, 7337.0 0.42
BALB/cJ m 7267.0 622.0   3 359.0 0.0855 6719.0, 7942.0 0.36
BTBR T+ Itpr3tf/J m 6583.0 0.0   1   0.0 0.0 6583.0, 6583.0 -0.26
BUB/BnJ m 9173.0 0.0   1   0.0 0.0 9173.0, 9173.0 2.08
BXA11/PgnJ m 8150.0 0.0   1   0.0 0.0 8150.0, 8150.0 1.16
BXA12/PgnJ m 4935.0 0.0   1   0.0 0.0 4935.0, 4935.0 -1.74
BXA13/PgnJ m 8369.0 0.0   1   0.0 0.0 8369.0, 8369.0 1.35
BXA14/PgnJ m 4702.0 0.0   1   0.0 0.0 4702.0, 4702.0 -1.95
BXA16/PgnJ m 7635.0 309.0   2   218.0 0.0404 7417.0, 7853.0 0.69
BXA1/PgnJ m 7052.0 0.0   1   0.0 0.0 7052.0, 7052.0 0.17
BXA24/PgnJ m 6944.0 0.0   1   0.0 0.0 6944.0, 6944.0 0.07
BXA25/PgnJ m 5424.0 0.0   1   0.0 0.0 5424.0, 5424.0 -1.3
BXA26/PgnJ m 7144.0 0.0   1   0.0 0.0 7144.0, 7144.0 0.25
BXA2/PgnJ m 7466.0 0.0   1   0.0 0.0 7466.0, 7466.0 0.54
BXA4/PgnJ m 5350.0 0.0   1   0.0 0.0 5350.0, 5350.0 -1.37
BXA7/PgnJ m 6155.0 0.0   1   0.0 0.0 6155.0, 6155.0 -0.64
BXA8/PgnJ m 7226.0 0.0   1   0.0 0.0 7226.0, 7226.0 0.32
BXD11/TyJ m 6364.0 0.0   1   0.0 0.0 6364.0, 6364.0 -0.45
BXD12/TyJ m 6492.0 0.0   1   0.0 0.0 6492.0, 6492.0 -0.34
BXD13/TyJ m 4604.0 0.0   1   0.0 0.0 4604.0, 4604.0 -2.04
BXD14/TyJ m 7053.0 0.0   1   0.0 0.0 7053.0, 7053.0 0.17
BXD15/TyJ m 7195.0 0.0   1   0.0 0.0 7195.0, 7195.0 0.3
BXD18/TyJ m 5084.0 0.0   1   0.0 0.0 5084.0, 5084.0 -1.61
BXD19/TyJ m 6820.0 259.0   2   183.0 0.038 6637.0, 7004.0 -0.04
BXD1/TyJ m 4491.0 0.0   1   0.0 0.0 4491.0, 4491.0 -2.14
BXD20/TyJ m 7058.0 0.0   1   0.0 0.0 7058.0, 7058.0 0.17
BXD22/TyJ m 7308.0 0.0   1   0.0 0.0 7308.0, 7308.0 0.4
BXD24/TyJ m 5860.0 0.0   1   0.0 0.0 5860.0, 5860.0 -0.91
BXD24/TyJ-Cep290rd16/J m 5995.0 0.0   1   0.0 0.0 5995.0, 5995.0 -0.79
BXD28/TyJ m 6162.0 530.0   2   375.0 0.086 5788.0, 6537.0 -0.64
BXD29-Tlr4lps-2J/J m 7441.0 0.0   1   0.0 0.0 7441.0, 7441.0 0.52
BXD2/TyJ m 7097.0 0.0   1   0.0 0.0 7097.0, 7097.0 0.21
BXD32/TyJ m 5888.0 0.0   1   0.0 0.0 5888.0, 5888.0 -0.88
BXD33/TyJ m 8584.0 0.0   1   0.0 0.0 8584.0, 8584.0 1.55
BXD34/TyJ m 5301.0 0.0   1   0.0 0.0 5301.0, 5301.0 -1.41
BXD36/TyJ m 5366.0 0.0   1   0.0 0.0 5366.0, 5366.0 -1.35
BXD38/TyJ m 7817.0 0.0   1   0.0 0.0 7817.0, 7817.0 0.86
BXD39/TyJ m 6718.0 0.0   1   0.0 0.0 6718.0, 6718.0 -0.13
BXD40/TyJ m 8421.0 0.0   1   0.0 0.0 8421.0, 8421.0 1.4
BXD42/TyJ m 5086.0 0.0   1   0.0 0.0 5086.0, 5086.0 -1.61
BXD5/TyJ m 6622.0 0.0   1   0.0 0.0 6622.0, 6622.0 -0.22
BXD6/TyJ m 7551.0 0.0   1   0.0 0.0 7551.0, 7551.0 0.62
BXD8/TyJ m 3936.0 0.0   1   0.0 0.0 3936.0, 3936.0 -2.64
BXD9/TyJ m 7032.0 0.0   1   0.0 0.0 7032.0, 7032.0 0.15
BXH10/TyJ m 7630.0 0.0   1   0.0 0.0 7630.0, 7630.0 0.69
BXH19/TyJ m 6361.0 0.0   1   0.0 0.0 6361.0, 6361.0 -0.46
BXH20/KccJ m 9786.0 0.0   1   0.0 0.0 9786.0, 9786.0 2.63
BXH22/KccJ m 7761.0 0.0   1   0.0 0.0 7761.0, 7761.0 0.81
BXH2/TyJ m 5850.0 0.0   1   0.0 0.0 5850.0, 5850.0 -0.92
BXH4/TyJ m 5896.0 501.0   2   354.0 0.085 5542.0, 6250.0 -0.88
BXH6/TyJ m 8346.0 0.0   1   0.0 0.0 8346.0, 8346.0 1.33
BXH7/TyJ m 6921.0 0.0   1   0.0 0.0 6921.0, 6921.0 0.05
BXH8/TyJ m 5554.0 0.0   1   0.0 0.0 5554.0, 5554.0 -1.18
BXH9/TyJ m 7627.0 0.0   1   0.0 0.0 7627.0, 7627.0 0.69
C3H/HeJ m 6898.0 459.0   2   324.0 0.0665 6574.0, 7223.0 0.03
C57BL/6J m 6491.0 964.0   5 431.0 0.148 4899.0, 7451.0 -0.34
C57L/J m 6876.0 0.0   1   0.0 0.0 6876.0, 6876.0 0.01
C58/J m 8548.0 0.0   1   0.0 0.0 8548.0, 8548.0 1.52
CAST/EiJ m 8360.0 0.0   1   0.0 0.0 8360.0, 8360.0 1.35
CBA/J m 7223.0 0.0   1   0.0 0.0 7223.0, 7223.0 0.32
CE/J m 5991.0 0.0   1   0.0 0.0 5991.0, 5991.0 -0.79
CXB11/HiAJ m 7347.0 257.0   2   182.0 0.035 7165.0, 7529.0 0.43
CXB12/HiAJ m 6194.0 1121.0   2   792.0 0.181 5402.0, 6987.0 -0.61
CXB13/HiAJ m 7542.0 1279.0   3 738.0 0.17 6299.0, 8854.0 0.61
CXB1/ByJ m 7412.0 996.0   3 575.0 0.134 6263.0, 8008.0 0.49
CXB2/ByJ m 7423.0 771.0   3 445.0 0.104 6629.0, 8168.0 0.5
CXB3/ByJ m 5969.0 887.0   2   627.0 0.149 5342.0, 6596.0 -0.81
CXB4/ByJ m 7397.0 465.0   2   329.0 0.0629 7068.0, 7726.0 0.48
CXB6/ByJ m 5207.0 200.0   3 116.0 0.0384 4988.0, 5380.0 -1.5
CXB7/ByJ m 6108.0 176.0   2   124.0 0.0288 5984.0, 6233.0 -0.68
CXB8/HiAJ m 7034.0 877.0   3 507.0 0.125 6023.0, 7600.0 0.15
CXB9/HiAJ m 6244.0 343.0   3 198.0 0.055 6029.0, 6640.0 -0.56
DBA/2J m 6099.0 510.0   4 255.0 0.0837 5621.0, 6803.0 -0.69
FVB/NJ m 6766.0 0.0   1   0.0 0.0 6766.0, 6766.0 -0.09
I/LnJ m 8393.0 0.0   1   0.0 0.0 8393.0, 8393.0 1.38
KK/HlJ m 5484.0 0.0   1   0.0 0.0 5484.0, 5484.0 -1.25
LG/J m 9306.0 0.0   1   0.0 0.0 9306.0, 9306.0 2.2
LP/J m 7565.0 0.0   1   0.0 0.0 7565.0, 7565.0 0.63
MA/MyJ m 6283.0 0.0   1   0.0 0.0 6283.0, 6283.0 -0.53
NOD/ShiLtJ m 6412.0 0.0   1   0.0 0.0 6412.0, 6412.0 -0.41
NON/ShiLtJ m 7196.0 0.0   1   0.0 0.0 7196.0, 7196.0 0.3
NZW/LacJ m 6832.0 0.0   1   0.0 0.0 6832.0, 6832.0 -0.03
PL/J m 7830.0 0.0   1   0.0 0.0 7830.0, 7830.0 0.87
RIIIS/J m 6168.0 0.0   1   0.0 0.0 6168.0, 6168.0 -0.63
SEA/GnJ m 7694.0 0.0   1   0.0 0.0 7694.0, 7694.0 0.75
SJL/J m 8598.0 0.0   1   0.0 0.0 8598.0, 8598.0 1.56
SM/J m 6994.0 0.0   1   0.0 0.0 6994.0, 6994.0 0.11
SWR/J m 8145.0 0.0   1   0.0 0.0 8145.0, 8145.0 1.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 7007.25 510.1989 8044.0988 5970.4012
AXB19b/PgnJ m 8368.35 510.1989 9405.1988 7331.5012
AXB24/PgnJ m 6212.2 510.1989 7249.0488 5175.3512
BALB/cJ m 7267.0 416.5756 8113.5835 6420.4165
BXA16/PgnJ m 7635.05 510.1989 8671.8988 6598.2012
BXD19/TyJ m 6820.25 510.1989 7857.0988 5783.4012
BXD28/TyJ m 6162.25 510.1989 7199.0988 5125.4012
BXH4/TyJ m 5896.05 510.1989 6932.8988 4859.2012
C3H/HeJ m 6898.3 510.1989 7935.1488 5861.4512
C57BL/6J m 6490.98 322.6781 7146.7408 5835.2192
CXB11/HiAJ m 7347.15 510.1989 8383.9988 6310.3012
CXB12/HiAJ m 6194.1 510.1989 7230.9488 5157.2512
CXB13/HiAJ m 7541.7667 416.5756 8388.3502 6695.1831
CXB1/ByJ m 7412.2667 416.5756 8258.8502 6565.6831
CXB2/ByJ m 7422.8 416.5756 8269.3835 6576.2165
CXB3/ByJ m 5969.1 510.1989 7005.9488 4932.2512
CXB4/ByJ m 7397.4 510.1989 8434.2488 6360.5512
CXB6/ByJ m 5207.4333 416.5756 6054.0169 4360.8498
CXB7/ByJ m 6108.3 510.1989 7145.1488 5071.4512
CXB8/HiAJ m 7033.9667 416.5756 7880.5502 6187.3831
CXB9/HiAJ m 6243.8333 416.5756 7090.4169 5397.2498
DBA/2J m 6098.65 360.7651 6831.8128 5365.4872




  GWAS USING LINEAR MIXED MODELS