Phenotype measure:   HMDPpheno7   FAD

ID, description, units MPD:50236   FAD   flavin adenine dinucleotide (FAD) (16h fast), relative abundance  
Data set, strains HMDPpheno7   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno7 - flavin adenine dinucleotide (FAD) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means139674   None
Median of the strain means139228   None
SD of the strain means± 18594
Coefficient of variation (CV)0.133
Min–max range of strain means88893   –   187006   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 21169014599.1226 1008048314.2439 5.1999 < 0.0001
Residuals 34 6591217436.1987 193859336.3588


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 131204.0 0.0   1   0.0 0.0 131204.0, 131204.0 -0.46
A/J m 144962.0 16429.0   2   11617.0 0.113 133344.0, 156579.0 0.28
AKR/J m 153177.0 0.0   1   0.0 0.0 153177.0, 153177.0 0.73
AXB10/PgnJ m 167757.0 0.0   1   0.0 0.0 167757.0, 167757.0 1.51
AXB12/PgnJ m 132505.0 0.0   1   0.0 0.0 132505.0, 132505.0 -0.39
AXB13/PgnJ m 170589.0 0.0   1   0.0 0.0 170589.0, 170589.0 1.66
AXB15/PgnJ m 148792.0 0.0   1   0.0 0.0 148792.0, 148792.0 0.49
AXB19a/PgnJ m 155205.0 0.0   1   0.0 0.0 155205.0, 155205.0 0.84
AXB19b/PgnJ m 177442.0 6861.0   2   4852.0 0.0387 172591.0, 182294.0 2.03
AXB19/PgnJ m 163020.0 0.0   1   0.0 0.0 163020.0, 163020.0 1.26
AXB1/PgnJ m 144824.0 0.0   1   0.0 0.0 144824.0, 144824.0 0.28
AXB23/PgnJ m 138712.0 0.0   1   0.0 0.0 138712.0, 138712.0 -0.05
AXB24/PgnJ m 129153.0 21992.0   2   15551.0 0.17 113602.0, 144704.0 -0.57
AXB2/PgnJ m 126300.0 0.0   1   0.0 0.0 126300.0, 126300.0 -0.72
AXB4/PgnJ m 166252.0 0.0   1   0.0 0.0 166252.0, 166252.0 1.43
AXB5/PgnJ m 126066.0 0.0   1   0.0 0.0 126066.0, 126066.0 -0.73
AXB6/PgnJ m 171491.0 0.0   1   0.0 0.0 171491.0, 171491.0 1.71
AXB8/PgnJ m 139353.0 0.0   1   0.0 0.0 139353.0, 139353.0 -0.02
BALB/cJ m 152371.0 879.0   3 508.0 0.00577 151453.0, 153206.0 0.68
BTBR T+ Itpr3tf/J m 134365.0 0.0   1   0.0 0.0 134365.0, 134365.0 -0.29
BUB/BnJ m 144708.0 0.0   1   0.0 0.0 144708.0, 144708.0 0.27
BXA11/PgnJ m 136584.0 0.0   1   0.0 0.0 136584.0, 136584.0 -0.17
BXA12/PgnJ m 100510.0 0.0   1   0.0 0.0 100510.0, 100510.0 -2.11
BXA13/PgnJ m 178195.0 0.0   1   0.0 0.0 178195.0, 178195.0 2.07
BXA14/PgnJ m 135834.0 0.0   1   0.0 0.0 135834.0, 135834.0 -0.21
BXA16/PgnJ m 119874.0 12277.0   2   8681.0 0.102 111193.0, 128555.0 -1.06
BXA1/PgnJ m 155655.0 0.0   1   0.0 0.0 155655.0, 155655.0 0.86
BXA24/PgnJ m 138582.0 0.0   1   0.0 0.0 138582.0, 138582.0 -0.06
BXA25/PgnJ m 131633.0 0.0   1   0.0 0.0 131633.0, 131633.0 -0.43
BXA26/PgnJ m 125064.0 0.0   1   0.0 0.0 125064.0, 125064.0 -0.79
BXA2/PgnJ m 136394.0 0.0   1   0.0 0.0 136394.0, 136394.0 -0.18
BXA4/PgnJ m 119158.0 0.0   1   0.0 0.0 119158.0, 119158.0 -1.1
BXA7/PgnJ m 123020.0 0.0   1   0.0 0.0 123020.0, 123020.0 -0.9
BXA8/PgnJ m 137758.0 0.0   1   0.0 0.0 137758.0, 137758.0 -0.1
BXD11/TyJ m 134324.0 0.0   1   0.0 0.0 134324.0, 134324.0 -0.29
BXD12/TyJ m 138497.0 0.0   1   0.0 0.0 138497.0, 138497.0 -0.06
BXD13/TyJ m 129705.0 0.0   1   0.0 0.0 129705.0, 129705.0 -0.54
BXD14/TyJ m 159376.0 0.0   1   0.0 0.0 159376.0, 159376.0 1.06
BXD15/TyJ m 136940.0 0.0   1   0.0 0.0 136940.0, 136940.0 -0.15
BXD18/TyJ m 108141.0 0.0   1   0.0 0.0 108141.0, 108141.0 -1.7
BXD19/TyJ m 141137.0 4811.0   2   3402.0 0.0341 137735.0, 144539.0 0.08
BXD1/TyJ m 144062.0 0.0   1   0.0 0.0 144062.0, 144062.0 0.24
BXD20/TyJ m 132364.0 0.0   1   0.0 0.0 132364.0, 132364.0 -0.39
BXD21/TyJ m 97161.0 0.0   1   0.0 0.0 97161.0, 97161.0 -2.29
BXD22/TyJ m 147213.0 0.0   1   0.0 0.0 147213.0, 147213.0 0.41
BXD24/TyJ m 119571.0 0.0   1   0.0 0.0 119571.0, 119571.0 -1.08
BXD24/TyJ-Cep290rd16/J m 138658.0 0.0   1   0.0 0.0 138658.0, 138658.0 -0.05
BXD28/TyJ m 120197.0 4017.0   2   2841.0 0.0334 117356.0, 123037.0 -1.05
BXD29-Tlr4lps-2J/J m 146220.0 0.0   1   0.0 0.0 146220.0, 146220.0 0.35
BXD2/TyJ m 127710.0 0.0   1   0.0 0.0 127710.0, 127710.0 -0.64
BXD32/TyJ m 122985.0 0.0   1   0.0 0.0 122985.0, 122985.0 -0.9
BXD33/TyJ m 134898.0 0.0   1   0.0 0.0 134898.0, 134898.0 -0.26
BXD34/TyJ m 120025.0 0.0   1   0.0 0.0 120025.0, 120025.0 -1.06
BXD36/TyJ m 123488.0 0.0   1   0.0 0.0 123488.0, 123488.0 -0.87
BXD38/TyJ m 119476.0 0.0   1   0.0 0.0 119476.0, 119476.0 -1.09
BXD39/TyJ m 140680.0 0.0   1   0.0 0.0 140680.0, 140680.0 0.05
BXD40/TyJ m 143417.0 0.0   1   0.0 0.0 143417.0, 143417.0 0.2
BXD42/TyJ m 119193.0 0.0   1   0.0 0.0 119193.0, 119193.0 -1.1
BXD5/TyJ m 139104.0 0.0   1   0.0 0.0 139104.0, 139104.0 -0.03
BXD6/TyJ m 129972.0 0.0   1   0.0 0.0 129972.0, 129972.0 -0.52
BXD8/TyJ m 88893.0 0.0   1   0.0 0.0 88893.0, 88893.0 -2.73
BXD9/TyJ m 137678.0 0.0   1   0.0 0.0 137678.0, 137678.0 -0.11
BXH10/TyJ m 165013.0 0.0   1   0.0 0.0 165013.0, 165013.0 1.36
BXH19/TyJ m 168368.0 0.0   1   0.0 0.0 168368.0, 168368.0 1.54
BXH20/KccJ m 148185.0 0.0   1   0.0 0.0 148185.0, 148185.0 0.46
BXH22/KccJ m 151479.0 0.0   1   0.0 0.0 151479.0, 151479.0 0.63
BXH2/TyJ m 158235.0 0.0   1   0.0 0.0 158235.0, 158235.0 1.0
BXH4/TyJ m 141321.0 6317.0   2   4467.0 0.0447 136854.0, 145788.0 0.09
BXH6/TyJ m 178315.0 0.0   1   0.0 0.0 178315.0, 178315.0 2.08
BXH7/TyJ m 145846.0 0.0   1   0.0 0.0 145846.0, 145846.0 0.33
BXH8/TyJ m 142682.0 0.0   1   0.0 0.0 142682.0, 142682.0 0.16
BXH9/TyJ m 143694.0 0.0   1   0.0 0.0 143694.0, 143694.0 0.22
C3H/HeJ m 160664.0 10062.0   2   7115.0 0.0626 153549.0, 167779.0 1.13
C57BL/6J m 120703.0 10089.0   5 4512.0 0.0836 110566.0, 134477.0 -1.02
C57L/J m 137702.0 0.0   1   0.0 0.0 137702.0, 137702.0 -0.11
C58/J m 140668.0 0.0   1   0.0 0.0 140668.0, 140668.0 0.05
CAST/EiJ m 140349.0 0.0   1   0.0 0.0 140349.0, 140349.0 0.04
CBA/J m 146833.0 0.0   1   0.0 0.0 146833.0, 146833.0 0.38
CE/J m 140504.0 0.0   1   0.0 0.0 140504.0, 140504.0 0.04
CXB11/HiAJ m 144718.0 30021.0   2   21228.0 0.207 123490.0, 165946.0 0.27
CXB12/HiAJ m 100291.0 1855.0   2   1312.0 0.0185 98979.0, 101602.0 -2.12
CXB13/HiAJ m 132109.0 18302.0   3 10567.0 0.139 118823.0, 152985.0 -0.41
CXB1/ByJ m 166492.0 29307.0   3 16920.0 0.176 147172.0, 200213.0 1.44
CXB2/ByJ m 123238.0 8915.0   3 5147.0 0.0723 114752.0, 132527.0 -0.88
CXB3/ByJ m 114501.0 1631.0   2   1154.0 0.0142 113347.0, 115654.0 -1.35
CXB4/ByJ m 139520.0 18600.0   2   13152.0 0.133 126368.0, 152672.0 -0.01
CXB6/ByJ m 105956.0 8976.0   3 5183.0 0.0847 96913.0, 114865.0 -1.81
CXB7/ByJ m 141153.0 1822.0   2   1288.0 0.0129 139865.0, 142441.0 0.08
CXB8/HiAJ m 119874.0 12621.0   3 7287.0 0.105 109207.0, 133807.0 -1.06
CXB9/HiAJ m 102707.0 18953.0   3 10943.0 0.185 83825.0, 121730.0 -1.99
DBA/2J m 125192.0 4053.0   4 2027.0 0.0324 121956.0, 131106.0 -0.78
FVB/NJ m 139043.0 0.0   1   0.0 0.0 139043.0, 139043.0 -0.03
I/LnJ m 175474.0 0.0   1   0.0 0.0 175474.0, 175474.0 1.93
KK/HlJ m 134103.0 0.0   1   0.0 0.0 134103.0, 134103.0 -0.3
LG/J m 187006.0 0.0   1   0.0 0.0 187006.0, 187006.0 2.55
LP/J m 156722.0 0.0   1   0.0 0.0 156722.0, 156722.0 0.92
MA/MyJ m 150371.0 0.0   1   0.0 0.0 150371.0, 150371.0 0.58
NOD/ShiLtJ m 144580.0 0.0   1   0.0 0.0 144580.0, 144580.0 0.26
NON/ShiLtJ m 136580.0 0.0   1   0.0 0.0 136580.0, 136580.0 -0.17
NZW/LacJ m 150206.0 0.0   1   0.0 0.0 150206.0, 150206.0 0.57
PL/J m 165634.0 0.0   1   0.0 0.0 165634.0, 165634.0 1.4
RIIIS/J m 143288.0 0.0   1   0.0 0.0 143288.0, 143288.0 0.19
SEA/GnJ m 133789.0 0.0   1   0.0 0.0 133789.0, 133789.0 -0.32
SJL/J m 145717.0 0.0   1   0.0 0.0 145717.0, 145717.0 0.32
SM/J m 154756.0 0.0   1   0.0 0.0 154756.0, 154756.0 0.81
SWR/J m 144320.0 0.0   1   0.0 0.0 144320.0, 144320.0 0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 144961.85 9845.2866 164969.8796 124953.8204
AXB19b/PgnJ m 177442.4 9845.2866 197450.4296 157434.3704
AXB24/PgnJ m 129152.9 9845.2866 149160.9296 109144.8704
BALB/cJ m 152370.9667 8038.6428 168707.4545 136034.4789
BXA16/PgnJ m 119874.0 9845.2866 139882.0296 99865.9704
BXD19/TyJ m 141136.65 9845.2866 161144.6796 121128.6204
BXD28/TyJ m 120196.65 9845.2866 140204.6796 100188.6204
BXH4/TyJ m 141321.4 9845.2866 161329.4296 121313.3704
C3H/HeJ m 160664.15 9845.2866 180672.1796 140656.1204
C57BL/6J m 120702.96 6226.706 133357.149 108048.771
CXB11/HiAJ m 144717.7 9845.2866 164725.7296 124709.6704
CXB12/HiAJ m 100290.85 9845.2866 120298.8796 80282.8204
CXB13/HiAJ m 132109.0333 8038.6428 148445.5211 115772.5455
CXB1/ByJ m 166492.0333 8038.6428 182828.5211 150155.5455
CXB2/ByJ m 123237.5333 8038.6428 139574.0211 106901.0455
CXB3/ByJ m 114500.6 9845.2866 134508.6296 94492.5704
CXB4/ByJ m 139520.0 9845.2866 159528.0296 119511.9704
CXB6/ByJ m 105956.1667 8038.6428 122292.6545 89619.6789
CXB7/ByJ m 141153.05 9845.2866 161161.0796 121145.0204
CXB8/HiAJ m 119874.4333 8038.6428 136210.9211 103537.9455
CXB9/HiAJ m 102706.5333 8038.6428 119043.0211 86370.0455
DBA/2J m 125192.15 6961.6689 139339.9634 111044.3366




  GWAS USING LINEAR MIXED MODELS