Project measure / variable:   HMDPpheno7   NAD

ID, description, units MPD:50231   NAD   liver nicotinamide adenine dinucleotide (NAD+) (16h fast), relative abundance    
Data set, strains HMDPpheno7   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno7 - liver nicotinamide adenine dinucleotide (NAD+) (16h fast), relative abundance

BXD14/TyJBXD36/TyJBXH10/TyJBXD1/TyJBXA13/PgnJCXB1/ByJAXB4/PgnJI/LnJLG/JBXD33/TyJBXD29-Tlr4<lps-2J>/JCXB11/HiAJCXB13/HiAJAXB19b/PgnJAXB10/PgnJRIIIS/JBXA1/PgnJBXA8/PgnJAXB13/PgnJC3H/HeJAXB23/PgnJAXB19a/PgnJBXD19/TyJBXH6/TyJPL/JBXD15/TyJMA/MyJBXH22/KccJBXD24/TyJCXB2/ByJAXB6/PgnJC57L/JBXD9/TyJBXH20/KccJBXD40/TyJAXB19/PgnJBXA11/PgnJBXA16/PgnJSM/JBALB/cJLP/JBXD24/TyJ-Cep290<rd16>/JSEA/GnJBXD32/TyJNON/ShiLtJDBA/2JAXB8/PgnJSWR/JCXB8/HiAJBXD2/TyJCXB4/ByJBXH9/TyJBXD5/TyJBXA26/PgnJCAST/EiJ129X1/SvJAKR/JBUB/BnJAXB1/PgnJBXD11/TyJBXA24/PgnJAXB12/PgnJBXD22/TyJBXD12/TyJBXH2/TyJAXB15/PgnJCBA/JA/JCXB7/ByJC58/JBXH7/TyJAXB2/PgnJBXD38/TyJBXH4/TyJBXD6/TyJNOD/ShiLtJBXD13/TyJBXD34/TyJBTBR T<+> Itpr3<tf>/JC57BL/6JCXB12/HiAJCE/JBXD21/TyJCXB9/HiAJKK/HlJAXB5/PgnJBXA25/PgnJBXA7/PgnJBXD28/TyJBXH8/TyJCXB6/ByJFVB/NJBXD20/TyJBXA2/PgnJBXH19/TyJBXD42/TyJBXD8/TyJAXB24/PgnJBXD18/TyJCXB3/ByJNZW/LacJBXD39/TyJBXA12/PgnJSJL/JBXA4/PgnJBXA14/PgnJ (no units) 250,000300,000350,000400,000450,000500,000550,000600,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means396485   None
Median of the strain means394422   None
SD of the strain means± 56964
Coefficient of variation (CV)0.144
Min–max range of strain means228611   –   509822   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 131892997791.13 6280618942.4348 2.7324 0.0044
Residuals 34 78151704063.8901 2298579531.2909


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 389150.0 0.0   1   0.0 0.0 389150.0, 389150.0 -0.13
A/J m 375055.0 36816.0   2   26033.0 0.0982 349023.0, 401088.0 -0.38
AKR/J m 388909.0 0.0   1   0.0 0.0 388909.0, 388909.0 -0.13
AXB10/PgnJ m 459774.0 0.0   1   0.0 0.0 459774.0, 459774.0 1.11
AXB12/PgnJ m 385774.0 0.0   1   0.0 0.0 385774.0, 385774.0 -0.19
AXB13/PgnJ m 448284.0 0.0   1   0.0 0.0 448284.0, 448284.0 0.91
AXB15/PgnJ m 376622.0 0.0   1   0.0 0.0 376622.0, 376622.0 -0.35
AXB19a/PgnJ m 447212.0 0.0   1   0.0 0.0 447212.0, 447212.0 0.89
AXB19b/PgnJ m 460455.0 50202.0   2   35498.0 0.109 424956.0, 495953.0 1.12
AXB19/PgnJ m 421757.0 0.0   1   0.0 0.0 421757.0, 421757.0 0.44
AXB1/PgnJ m 387655.0 0.0   1   0.0 0.0 387655.0, 387655.0 -0.16
AXB23/PgnJ m 447239.0 0.0   1   0.0 0.0 447239.0, 447239.0 0.89
AXB24/PgnJ m 321911.0 64009.0   2   45261.0 0.199 276650.0, 367172.0 -1.31
AXB2/PgnJ m 369756.0 0.0   1   0.0 0.0 369756.0, 369756.0 -0.47
AXB4/PgnJ m 481299.0 0.0   1   0.0 0.0 481299.0, 481299.0 1.49
AXB5/PgnJ m 348807.0 0.0   1   0.0 0.0 348807.0, 348807.0 -0.84
AXB6/PgnJ m 430498.0 0.0   1   0.0 0.0 430498.0, 430498.0 0.6
AXB8/PgnJ m 408430.0 0.0   1   0.0 0.0 408430.0, 408430.0 0.21
BALB/cJ m 417886.0 19050.0   3 10999.0 0.0456 396787.0, 433823.0 0.38
BTBR T+ Itpr3tf/J m 364780.0 0.0   1   0.0 0.0 364780.0, 364780.0 -0.56
BUB/BnJ m 387798.0 0.0   1   0.0 0.0 387798.0, 387798.0 -0.15
BXA11/PgnJ m 421048.0 0.0   1   0.0 0.0 421048.0, 421048.0 0.43
BXA12/PgnJ m 287798.0 0.0   1   0.0 0.0 287798.0, 287798.0 -1.91
BXA13/PgnJ m 485568.0 0.0   1   0.0 0.0 485568.0, 485568.0 1.56
BXA14/PgnJ m 228611.0 0.0   1   0.0 0.0 228611.0, 228611.0 -2.95
BXA16/PgnJ m 420300.0 12979.0   2   9178.0 0.0309 411123.0, 429478.0 0.42
BXA1/PgnJ m 454850.0 0.0   1   0.0 0.0 454850.0, 454850.0 1.02
BXA24/PgnJ m 387098.0 0.0   1   0.0 0.0 387098.0, 387098.0 -0.16
BXA25/PgnJ m 347200.0 0.0   1   0.0 0.0 347200.0, 347200.0 -0.87
BXA26/PgnJ m 392337.0 0.0   1   0.0 0.0 392337.0, 392337.0 -0.07
BXA2/PgnJ m 328118.0 0.0   1   0.0 0.0 328118.0, 328118.0 -1.2
BXA4/PgnJ m 249155.0 0.0   1   0.0 0.0 249155.0, 249155.0 -2.59
BXA7/PgnJ m 344737.0 0.0   1   0.0 0.0 344737.0, 344737.0 -0.91
BXA8/PgnJ m 454474.0 0.0   1   0.0 0.0 454474.0, 454474.0 1.02
BXD11/TyJ m 387362.0 0.0   1   0.0 0.0 387362.0, 387362.0 -0.16
BXD12/TyJ m 379460.0 0.0   1   0.0 0.0 379460.0, 379460.0 -0.3
BXD13/TyJ m 366120.0 0.0   1   0.0 0.0 366120.0, 366120.0 -0.53
BXD14/TyJ m 509822.0 0.0   1   0.0 0.0 509822.0, 509822.0 1.99
BXD15/TyJ m 439738.0 0.0   1   0.0 0.0 439738.0, 439738.0 0.76
BXD18/TyJ m 321590.0 0.0   1   0.0 0.0 321590.0, 321590.0 -1.31
BXD19/TyJ m 445018.0 612.0   2   432.0 0.00137 444585.0, 445450.0 0.85
BXD1/TyJ m 489445.0 0.0   1   0.0 0.0 489445.0, 489445.0 1.63
BXD20/TyJ m 332649.0 0.0   1   0.0 0.0 332649.0, 332649.0 -1.12
BXD21/TyJ m 358929.0 0.0   1   0.0 0.0 358929.0, 358929.0 -0.66
BXD22/TyJ m 384228.0 0.0   1   0.0 0.0 384228.0, 384228.0 -0.22
BXD24/TyJ m 438593.0 0.0   1   0.0 0.0 438593.0, 438593.0 0.74
BXD24/TyJ-Cep290rd16/J m 415736.0 0.0   1   0.0 0.0 415736.0, 415736.0 0.34
BXD28/TyJ m 340837.0 257.0   2   182.0 0.000755 340655.0, 341019.0 -0.98
BXD29-Tlr4lps-2J/J m 474022.0 0.0   1   0.0 0.0 474022.0, 474022.0 1.36
BXD2/TyJ m 404478.0 0.0   1   0.0 0.0 404478.0, 404478.0 0.14
BXD32/TyJ m 413682.0 0.0   1   0.0 0.0 413682.0, 413682.0 0.3
BXD33/TyJ m 475541.0 0.0   1   0.0 0.0 475541.0, 475541.0 1.39
BXD34/TyJ m 365908.0 0.0   1   0.0 0.0 365908.0, 365908.0 -0.54
BXD36/TyJ m 506284.0 0.0   1   0.0 0.0 506284.0, 506284.0 1.93
BXD38/TyJ m 367665.0 0.0   1   0.0 0.0 367665.0, 367665.0 -0.51
BXD39/TyJ m 301688.0 0.0   1   0.0 0.0 301688.0, 301688.0 -1.66
BXD40/TyJ m 424918.0 0.0   1   0.0 0.0 424918.0, 424918.0 0.5
BXD42/TyJ m 323869.0 0.0   1   0.0 0.0 323869.0, 323869.0 -1.27
BXD5/TyJ m 396507.0 0.0   1   0.0 0.0 396507.0, 396507.0 0.0
BXD6/TyJ m 366621.0 0.0   1   0.0 0.0 366621.0, 366621.0 -0.52
BXD8/TyJ m 322255.0 0.0   1   0.0 0.0 322255.0, 322255.0 -1.3
BXD9/TyJ m 426774.0 0.0   1   0.0 0.0 426774.0, 426774.0 0.53
BXH10/TyJ m 491540.0 0.0   1   0.0 0.0 491540.0, 491540.0 1.67
BXH19/TyJ m 325778.0 0.0   1   0.0 0.0 325778.0, 325778.0 -1.24
BXH20/KccJ m 425598.0 0.0   1   0.0 0.0 425598.0, 425598.0 0.51
BXH22/KccJ m 439281.0 0.0   1   0.0 0.0 439281.0, 439281.0 0.75
BXH2/TyJ m 377107.0 0.0   1   0.0 0.0 377107.0, 377107.0 -0.34
BXH4/TyJ m 367401.0 59150.0   2   41825.0 0.161 325576.0, 409226.0 -0.51
BXH6/TyJ m 444812.0 0.0   1   0.0 0.0 444812.0, 444812.0 0.85
BXH7/TyJ m 369906.0 0.0   1   0.0 0.0 369906.0, 369906.0 -0.47
BXH8/TyJ m 336464.0 0.0   1   0.0 0.0 336464.0, 336464.0 -1.05
BXH9/TyJ m 401368.0 0.0   1   0.0 0.0 401368.0, 401368.0 0.09
C3H/HeJ m 447565.0 15362.0   2   10862.0 0.0343 436702.0, 458427.0 0.9
C57BL/6J m 363846.0 28644.0   5 12810.0 0.0787 332377.0, 403192.0 -0.57
C57L/J m 427929.0 0.0   1   0.0 0.0 427929.0, 427929.0 0.55
C58/J m 371246.0 0.0   1   0.0 0.0 371246.0, 371246.0 -0.44
CAST/EiJ m 392141.0 0.0   1   0.0 0.0 392141.0, 392141.0 -0.08
CBA/J m 375926.0 0.0   1   0.0 0.0 375926.0, 375926.0 -0.36
CE/J m 360638.0 0.0   1   0.0 0.0 360638.0, 360638.0 -0.63
CXB11/HiAJ m 472294.0 129044.0   2   91248.0 0.273 381046.0, 563542.0 1.33
CXB12/HiAJ m 360921.0 10385.0   2   7344.0 0.0288 353577.0, 368264.0 -0.62
CXB13/HiAJ m 468269.0 104836.0   3 60527.0 0.224 356094.0, 563766.0 1.26
CXB1/ByJ m 483239.0 87763.0   3 50670.0 0.182 429753.0, 584526.0 1.52
CXB2/ByJ m 437508.0 18600.0   3 10739.0 0.0425 424315.0, 458782.0 0.72
CXB3/ByJ m 320591.0 13263.0   2   9378.0 0.0414 311212.0, 329969.0 -1.33
CXB4/ByJ m 404399.0 15559.0   2   11002.0 0.0385 393397.0, 415401.0 0.14
CXB6/ByJ m 334703.0 16354.0   3 9442.0 0.0489 315871.0, 345322.0 -1.08
CXB7/ByJ m 374965.0 43237.0   2   30573.0 0.115 344391.0, 405538.0 -0.38
CXB8/HiAJ m 404660.0 4539.0   3 2621.0 0.0112 401780.0, 409893.0 0.14
CXB9/HiAJ m 358037.0 37622.0   3 21721.0 0.105 334197.0, 401408.0 -0.67
DBA/2J m 412057.0 24051.0   4 12025.0 0.0584 393709.0, 445063.0 0.27
FVB/NJ m 334091.0 0.0   1   0.0 0.0 334091.0, 334091.0 -1.1
I/LnJ m 480954.0 0.0   1   0.0 0.0 480954.0, 480954.0 1.48
KK/HlJ m 349808.0 0.0   1   0.0 0.0 349808.0, 349808.0 -0.82
LG/J m 478297.0 0.0   1   0.0 0.0 478297.0, 478297.0 1.44
LP/J m 417590.0 0.0   1   0.0 0.0 417590.0, 417590.0 0.37
MA/MyJ m 439643.0 0.0   1   0.0 0.0 439643.0, 439643.0 0.76
NOD/ShiLtJ m 366353.0 0.0   1   0.0 0.0 366353.0, 366353.0 -0.53
NON/ShiLtJ m 412391.0 0.0   1   0.0 0.0 412391.0, 412391.0 0.28
NZW/LacJ m 306020.0 0.0   1   0.0 0.0 306020.0, 306020.0 -1.59
PL/J m 440033.0 0.0   1   0.0 0.0 440033.0, 440033.0 0.76
RIIIS/J m 459545.0 0.0   1   0.0 0.0 459545.0, 459545.0 1.11
SEA/GnJ m 414452.0 0.0   1   0.0 0.0 414452.0, 414452.0 0.32
SJL/J m 250453.0 0.0   1   0.0 0.0 250453.0, 250453.0 -2.56
SM/J m 419101.0 0.0   1   0.0 0.0 419101.0, 419101.0 0.4
SWR/J m 408402.0 0.0   1   0.0 0.0 408402.0, 408402.0 0.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 375055.35 33901.1765 443950.8297 306159.8703
AXB19b/PgnJ m 460454.6 33901.1765 529350.0797 391559.1203
AXB24/PgnJ m 321911.35 33901.1765 390806.8297 253015.8703
BALB/cJ m 417886.4 27680.1947 474139.3236 361633.4764
BXA16/PgnJ m 420300.45 33901.1765 489195.9297 351404.9703
BXD19/TyJ m 445017.7 33901.1765 513913.1797 376122.2203
BXD28/TyJ m 340837.05 33901.1765 409732.5297 271941.5703
BXH4/TyJ m 367401.35 33901.1765 436296.8297 298505.8703
C3H/HeJ m 447564.8 33901.1765 516460.2797 378669.3203
C57BL/6J m 363845.7 21440.9866 407419.0273 320272.3727
CXB11/HiAJ m 472293.95 33901.1765 541189.4297 403398.4703
CXB12/HiAJ m 360920.55 33901.1765 429816.0297 292025.0703
CXB13/HiAJ m 468268.7333 27680.1947 524521.657 412015.8097
CXB1/ByJ m 483238.9667 27680.1947 539491.8903 426986.043
CXB2/ByJ m 437507.8333 27680.1947 493760.757 381254.9097
CXB3/ByJ m 320590.6 33901.1765 389486.0797 251695.1203
CXB4/ByJ m 404398.9 33901.1765 473294.3797 335503.4203
CXB6/ByJ m 334703.3333 27680.1947 390956.257 278450.4097
CXB7/ByJ m 374964.55 33901.1765 443860.0297 306069.0703
CXB8/HiAJ m 404660.3333 27680.1947 460913.257 348407.4097
CXB9/HiAJ m 358036.9667 27680.1947 414289.8903 301784.043
DBA/2J m 412057.45 23971.7518 460773.9109 363340.9891




  GWAS USING LINEAR MIXED MODELS

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