Project measure / variable:   HMDPpheno7   glucarate

ID, description, units MPD:50226   glucarate   liver glucarate (saccharate) (16h fast), relative abundance    
Data set, strains HMDPpheno7   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

HMDPpheno7 - liver glucarate (saccharate) (16h fast), relative abundance

BXD38/TyJBXD20/TyJBXD42/TyJBXD8/TyJBXD39/TyJBXD24/TyJBXD11/TyJSM/JBXD1/TyJBXA11/PgnJBXD24/TyJ-Cep290<rd16>/JCXB7/ByJAXB12/PgnJAXB15/PgnJBXD6/TyJAXB19b/PgnJBXA14/PgnJC57BL/6JCXB2/ByJAXB19/PgnJCXB13/HiAJBXD21/TyJBXD33/TyJBXA2/PgnJBXD13/TyJCXB8/HiAJAXB4/PgnJI/LnJBXD2/TyJC57L/JBXH22/KccJAXB13/PgnJAXB24/PgnJBXD29-Tlr4<lps-2J>/JBXA16/PgnJDBA/2JBXD19/TyJBXA8/PgnJCXB9/HiAJCXB1/ByJBXD32/TyJBXH7/TyJBXA7/PgnJBXA13/PgnJBXA24/PgnJBXA4/PgnJAXB8/PgnJBXH8/TyJBXD34/TyJBXD12/TyJAXB1/PgnJBXD18/TyJKK/HlJBXH10/TyJRIIIS/JCXB3/ByJAKR/JSWR/JBXD5/TyJCXB4/ByJBXH19/TyJAXB10/PgnJBXD15/TyJAXB19a/PgnJBALB/cJBXD40/TyJCXB6/ByJCXB12/HiAJCE/JBXH20/KccJBXD22/TyJBXA1/PgnJ129X1/SvJBUB/BnJBXD14/TyJLP/JBXA26/PgnJBXH6/TyJAXB2/PgnJBXH2/TyJNOD/ShiLtJAXB6/PgnJBXA12/PgnJBXD9/TyJCXB11/HiAJNZW/LacJBXH4/TyJBXH9/TyJMA/MyJBXD28/TyJAXB23/PgnJA/JPL/JC3H/HeJNON/ShiLtJC58/JCAST/EiJSJL/JSEA/GnJBTBR T<+> Itpr3<tf>/JLG/JBXD36/TyJBXA25/PgnJCBA/JFVB/NJAXB5/PgnJ (no units) 0200,000400,000600,000800,0001,000,0001,200,0001,400,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means229112   None
Median of the strain means161686   None
SD of the strain means± 229625
Coefficient of variation (CV)1.00
Min–max range of strain means47134   –   1479713   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 400634557194.931 19077836056.9015 3.5755 0.0005
Residuals 34 181412424474.718 5335659543.3741


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 101895.0 0.0   1   0.0 0.0 101895.0, 101895.0 -0.55
A/J m 80354.0 5810.0   2   4108.0 0.0723 76246.0, 84462.0 -0.65
AKR/J m 152718.0 0.0   1   0.0 0.0 152718.0, 152718.0 -0.33
AXB10/PgnJ m 139794.0 0.0   1   0.0 0.0 139794.0, 139794.0 -0.39
AXB12/PgnJ m 348157.0 0.0   1   0.0 0.0 348157.0, 348157.0 0.52
AXB13/PgnJ m 238493.0 0.0   1   0.0 0.0 238493.0, 238493.0 0.04
AXB15/PgnJ m 331266.0 0.0   1   0.0 0.0 331266.0, 331266.0 0.44
AXB19a/PgnJ m 132777.0 0.0   1   0.0 0.0 132777.0, 132777.0 -0.42
AXB19b/PgnJ m 317930.0 78545.0   2   55540.0 0.247 262390.0, 373470.0 0.39
AXB19/PgnJ m 292587.0 0.0   1   0.0 0.0 292587.0, 292587.0 0.28
AXB1/PgnJ m 167840.0 0.0   1   0.0 0.0 167840.0, 167840.0 -0.27
AXB23/PgnJ m 80572.0 0.0   1   0.0 0.0 80572.0, 80572.0 -0.65
AXB24/PgnJ m 233222.0 36733.0   2   25974.0 0.158 207247.0, 259196.0 0.02
AXB2/PgnJ m 93530.0 0.0   1   0.0 0.0 93530.0, 93530.0 -0.59
AXB4/PgnJ m 253811.0 0.0   1   0.0 0.0 253811.0, 253811.0 0.11
AXB5/PgnJ m 47134.0 0.0   1   0.0 0.0 47134.0, 47134.0 -0.79
AXB6/PgnJ m 89954.0 0.0   1   0.0 0.0 89954.0, 89954.0 -0.61
AXB8/PgnJ m 189773.0 0.0   1   0.0 0.0 189773.0, 189773.0 -0.17
BALB/cJ m 132255.0 26866.0   3 15511.0 0.203 108882.0, 161607.0 -0.42
BTBR T+ Itpr3tf/J m 71607.0 0.0   1   0.0 0.0 71607.0, 71607.0 -0.69
BUB/BnJ m 100624.0 0.0   1   0.0 0.0 100624.0, 100624.0 -0.56
BXA11/PgnJ m 485178.0 0.0   1   0.0 0.0 485178.0, 485178.0 1.12
BXA12/PgnJ m 88916.0 0.0   1   0.0 0.0 88916.0, 88916.0 -0.61
BXA13/PgnJ m 203428.0 0.0   1   0.0 0.0 203428.0, 203428.0 -0.11
BXA14/PgnJ m 310166.0 0.0   1   0.0 0.0 310166.0, 310166.0 0.35
BXA16/PgnJ m 229627.0 40324.0   2   28513.0 0.176 201114.0, 258141.0 0.0
BXA1/PgnJ m 103966.0 0.0   1   0.0 0.0 103966.0, 103966.0 -0.55
BXA24/PgnJ m 197072.0 0.0   1   0.0 0.0 197072.0, 197072.0 -0.14
BXA25/PgnJ m 66067.0 0.0   1   0.0 0.0 66067.0, 66067.0 -0.71
BXA26/PgnJ m 96903.0 0.0   1   0.0 0.0 96903.0, 96903.0 -0.58
BXA2/PgnJ m 271750.0 0.0   1   0.0 0.0 271750.0, 271750.0 0.19
BXA4/PgnJ m 195399.0 0.0   1   0.0 0.0 195399.0, 195399.0 -0.15
BXA7/PgnJ m 211110.0 0.0   1   0.0 0.0 211110.0, 211110.0 -0.08
BXA8/PgnJ m 223284.0 0.0   1   0.0 0.0 223284.0, 223284.0 -0.03
BXD11/TyJ m 610177.0 0.0   1   0.0 0.0 610177.0, 610177.0 1.66
BXD12/TyJ m 171610.0 0.0   1   0.0 0.0 171610.0, 171610.0 -0.25
BXD13/TyJ m 269881.0 0.0   1   0.0 0.0 269881.0, 269881.0 0.18
BXD14/TyJ m 100559.0 0.0   1   0.0 0.0 100559.0, 100559.0 -0.56
BXD15/TyJ m 139178.0 0.0   1   0.0 0.0 139178.0, 139178.0 -0.39
BXD18/TyJ m 167194.0 0.0   1   0.0 0.0 167194.0, 167194.0 -0.27
BXD19/TyJ m 225859.0 238455.0   2   168613.0 1.06 57246.0, 394472.0 -0.01
BXD1/TyJ m 491255.0 0.0   1   0.0 0.0 491255.0, 491255.0 1.14
BXD20/TyJ m 1068604.0 0.0   1   0.0 0.0 1068604.0, 1068604.0 3.66
BXD21/TyJ m 281245.0 0.0   1   0.0 0.0 281245.0, 281245.0 0.23
BXD22/TyJ m 111201.0 0.0   1   0.0 0.0 111201.0, 111201.0 -0.51
BXD24/TyJ m 631060.0 0.0   1   0.0 0.0 631060.0, 631060.0 1.75
BXD24/TyJ-Cep290rd16/J m 448834.0 0.0   1   0.0 0.0 448834.0, 448834.0 0.96
BXD28/TyJ m 81366.0 20189.0   2   14276.0 0.248 67090.0, 95642.0 -0.64
BXD29-Tlr4lps-2J/J m 232215.0 0.0   1   0.0 0.0 232215.0, 232215.0 0.01
BXD2/TyJ m 252033.0 0.0   1   0.0 0.0 252033.0, 252033.0 0.1
BXD32/TyJ m 214656.0 0.0   1   0.0 0.0 214656.0, 214656.0 -0.06
BXD33/TyJ m 279801.0 0.0   1   0.0 0.0 279801.0, 279801.0 0.22
BXD34/TyJ m 172501.0 0.0   1   0.0 0.0 172501.0, 172501.0 -0.25
BXD36/TyJ m 67566.0 0.0   1   0.0 0.0 67566.0, 67566.0 -0.7
BXD38/TyJ m 1479713.0 0.0   1   0.0 0.0 1479713.0, 1479713.0 5.45
BXD39/TyJ m 873956.0 0.0   1   0.0 0.0 873956.0, 873956.0 2.81
BXD40/TyJ m 127188.0 0.0   1   0.0 0.0 127188.0, 127188.0 -0.44
BXD42/TyJ m 1056887.0 0.0   1   0.0 0.0 1056887.0, 1056887.0 3.6
BXD5/TyJ m 150068.0 0.0   1   0.0 0.0 150068.0, 150068.0 -0.34
BXD6/TyJ m 323199.0 0.0   1   0.0 0.0 323199.0, 323199.0 0.41
BXD8/TyJ m 969239.0 0.0   1   0.0 0.0 969239.0, 969239.0 3.22
BXD9/TyJ m 86695.0 0.0   1   0.0 0.0 86695.0, 86695.0 -0.62
BXH10/TyJ m 159600.0 0.0   1   0.0 0.0 159600.0, 159600.0 -0.3
BXH19/TyJ m 143934.0 0.0   1   0.0 0.0 143934.0, 143934.0 -0.37
BXH20/KccJ m 112978.0 0.0   1   0.0 0.0 112978.0, 112978.0 -0.51
BXH22/KccJ m 246203.0 0.0   1   0.0 0.0 246203.0, 246203.0 0.07
BXH2/TyJ m 92695.0 0.0   1   0.0 0.0 92695.0, 92695.0 -0.59
BXH4/TyJ m 84482.0 3639.0   2   2573.0 0.0431 81910.0, 87055.0 -0.63
BXH6/TyJ m 93592.0 0.0   1   0.0 0.0 93592.0, 93592.0 -0.59
BXH7/TyJ m 212940.0 0.0   1   0.0 0.0 212940.0, 212940.0 -0.07
BXH8/TyJ m 179954.0 0.0   1   0.0 0.0 179954.0, 179954.0 -0.21
BXH9/TyJ m 84385.0 0.0   1   0.0 0.0 84385.0, 84385.0 -0.63
C3H/HeJ m 78865.0 9843.0   2   6960.0 0.125 71905.0, 85825.0 -0.65
C57BL/6J m 306046.0 114999.0   5 51429.0 0.376 177836.0, 458915.0 0.34
C57L/J m 250246.0 0.0   1   0.0 0.0 250246.0, 250246.0 0.09
C58/J m 78234.0 0.0   1   0.0 0.0 78234.0, 78234.0 -0.66
CAST/EiJ m 73536.0 0.0   1   0.0 0.0 73536.0, 73536.0 -0.68
CBA/J m 61315.0 0.0   1   0.0 0.0 61315.0, 61315.0 -0.73
CE/J m 114490.0 0.0   1   0.0 0.0 114490.0, 114490.0 -0.5
CXB11/HiAJ m 86343.0 40253.0   2   28463.0 0.466 57879.0, 114806.0 -0.62
CXB12/HiAJ m 119088.0 10260.0   2   7255.0 0.0862 111834.0, 126344.0 -0.48
CXB13/HiAJ m 284931.0 96443.0   3 55681.0 0.338 175677.0, 358240.0 0.24
CXB1/ByJ m 215629.0 38716.0   3 22353.0 0.18 172257.0, 246701.0 -0.06
CXB2/ByJ m 303693.0 51258.0   3 29594.0 0.169 255563.0, 357591.0 0.32
CXB3/ByJ m 154802.0 17180.0   2   12148.0 0.111 142654.0, 166950.0 -0.32
CXB4/ByJ m 145428.0 6191.0   2   4378.0 0.0426 141050.0, 149805.0 -0.36
CXB6/ByJ m 122205.0 20099.0   3 11604.0 0.164 102520.0, 142694.0 -0.47
CXB7/ByJ m 356487.0 34707.0   2   24542.0 0.0974 331945.0, 381029.0 0.55
CXB8/HiAJ m 259426.0 71790.0   3 41448.0 0.277 214841.0, 342241.0 0.13
CXB9/HiAJ m 217629.0 58507.0   3 33779.0 0.269 153510.0, 268118.0 -0.05
DBA/2J m 229615.0 64373.0   4 32186.0 0.28 182565.0, 324555.0 0.0
FVB/NJ m 58681.0 0.0   1   0.0 0.0 58681.0, 58681.0 -0.74
I/LnJ m 252578.0 0.0   1   0.0 0.0 252578.0, 252578.0 0.1
KK/HlJ m 163773.0 0.0   1   0.0 0.0 163773.0, 163773.0 -0.28
LG/J m 69821.0 0.0   1   0.0 0.0 69821.0, 69821.0 -0.69
LP/J m 100096.0 0.0   1   0.0 0.0 100096.0, 100096.0 -0.56
MA/MyJ m 83909.0 0.0   1   0.0 0.0 83909.0, 83909.0 -0.63
NOD/ShiLtJ m 91169.0 0.0   1   0.0 0.0 91169.0, 91169.0 -0.6
NON/ShiLtJ m 78836.0 0.0   1   0.0 0.0 78836.0, 78836.0 -0.65
NZW/LacJ m 85295.0 0.0   1   0.0 0.0 85295.0, 85295.0 -0.63
PL/J m 80248.0 0.0   1   0.0 0.0 80248.0, 80248.0 -0.65
RIIIS/J m 159496.0 0.0   1   0.0 0.0 159496.0, 159496.0 -0.3
SEA/GnJ m 72876.0 0.0   1   0.0 0.0 72876.0, 72876.0 -0.68
SJL/J m 73369.0 0.0   1   0.0 0.0 73369.0, 73369.0 -0.68
SM/J m 533238.0 0.0   1   0.0 0.0 533238.0, 533238.0 1.32
SWR/J m 150839.0 0.0   1   0.0 0.0 150839.0, 150839.0 -0.34


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 80353.85 51651.0384 185321.3893 0.0
AXB19b/PgnJ m 317930.15 51651.0384 422897.6893 212962.6107
AXB24/PgnJ m 233221.7 51651.0384 338189.2393 128254.1607
BALB/cJ m 132254.7 42172.8963 217960.3369 46549.0631
BXA16/PgnJ m 229627.15 51651.0384 334594.6893 124659.6107
BXD19/TyJ m 225859.0 51651.0384 330826.5393 120891.4607
BXD28/TyJ m 81366.1 51651.0384 186333.6393 0.0
BXH4/TyJ m 84482.45 51651.0384 189449.9893 0.0
C3H/HeJ m 78865.15 51651.0384 183832.6893 0.0
C57BL/6J m 306046.46 32666.985 372433.7609 239659.1591
CXB11/HiAJ m 86342.6 51651.0384 191310.1393 0.0
CXB12/HiAJ m 119088.5 51651.0384 224056.0393 14120.9607
CXB13/HiAJ m 284930.7333 42172.8963 370636.3703 199225.0964
CXB1/ByJ m 215628.9667 42172.8963 301334.6036 129923.3297
CXB2/ByJ m 303692.6333 42172.8963 389398.2703 217986.9964
CXB3/ByJ m 154801.6 51651.0384 259769.1393 49834.0607
CXB4/ByJ m 145427.5 51651.0384 250395.0393 40459.9607
CXB6/ByJ m 122204.9667 42172.8963 207910.6036 36499.3297
CXB7/ByJ m 356486.8 51651.0384 461454.3393 251519.2607
CXB8/HiAJ m 259426.5 42172.8963 345132.1369 173720.8631
CXB9/HiAJ m 217629.0333 42172.8963 303334.6703 131923.3964
DBA/2J m 229614.925 36522.7995 303838.1838 155391.6662




  GWAS USING LINEAR MIXED MODELS

Loading data... this may take some time.