Phenotype measure:   HMDPpheno7   UDP_glucose

ID, description, units MPD:50223   UDP_glucose   liver UDP-glucose (16h fast), relative abundance  
Data set, strains HMDPpheno7   HMDP   105 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno7 - liver UDP-glucose (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested105 strains
Mean of the strain means66818   None
Median of the strain means59858   None
SD of the strain means± 42443
Coefficient of variation (CV)0.635
Min–max range of strain means10282   –   280936   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 42456726977.4742 2021748903.6892 3.1381 0.0015
Residuals 34 21904465162.9213 644248975.38


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 82582.0 0.0   1   0.0 0.0 82582.0, 82582.0 0.37
A/J m 102518.0 46907.0   2   33168.0 0.458 69350.0, 135686.0 0.84
AKR/J m 101858.0 0.0   1   0.0 0.0 101858.0, 101858.0 0.83
AXB10/PgnJ m 112615.0 0.0   1   0.0 0.0 112615.0, 112615.0 1.08
AXB12/PgnJ m 67646.0 0.0   1   0.0 0.0 67646.0, 67646.0 0.02
AXB13/PgnJ m 88673.0 0.0   1   0.0 0.0 88673.0, 88673.0 0.51
AXB15/PgnJ m 113088.0 0.0   1   0.0 0.0 113088.0, 113088.0 1.09
AXB19a/PgnJ m 165132.0 0.0   1   0.0 0.0 165132.0, 165132.0 2.32
AXB19b/PgnJ m 78386.0 30329.0   2   21446.0 0.387 56940.0, 99832.0 0.27
AXB19/PgnJ m 86663.0 0.0   1   0.0 0.0 86663.0, 86663.0 0.47
AXB1/PgnJ m 14219.0 0.0   1   0.0 0.0 14219.0, 14219.0 -1.24
AXB23/PgnJ m 94503.0 0.0   1   0.0 0.0 94503.0, 94503.0 0.65
AXB24/PgnJ m 55420.0 21182.0   2   14978.0 0.382 40442.0, 70399.0 -0.27
AXB2/PgnJ m 90032.0 0.0   1   0.0 0.0 90032.0, 90032.0 0.55
AXB4/PgnJ m 43425.0 0.0   1   0.0 0.0 43425.0, 43425.0 -0.55
AXB5/PgnJ m 61541.0 0.0   1   0.0 0.0 61541.0, 61541.0 -0.12
AXB6/PgnJ m 80230.0 0.0   1   0.0 0.0 80230.0, 80230.0 0.32
AXB8/PgnJ m 108407.0 0.0   1   0.0 0.0 108407.0, 108407.0 0.98
BALB/cJ m 117289.0 20270.0   3 11703.0 0.173 95544.0, 135662.0 1.19
BTBR T+ Itpr3tf/J m 33745.0 0.0   1   0.0 0.0 33745.0, 33745.0 -0.78
BUB/BnJ m 73902.0 0.0   1   0.0 0.0 73902.0, 73902.0 0.17
BXA11/PgnJ m 50381.0 0.0   1   0.0 0.0 50381.0, 50381.0 -0.39
BXA12/PgnJ m 32063.0 0.0   1   0.0 0.0 32063.0, 32063.0 -0.82
BXA13/PgnJ m 59980.0 0.0   1   0.0 0.0 59980.0, 59980.0 -0.16
BXA14/PgnJ m 162593.0 0.0   1   0.0 0.0 162593.0, 162593.0 2.26
BXA16/PgnJ m 69611.0 20921.0   2   14793.0 0.301 54818.0, 84405.0 0.07
BXA1/PgnJ m 21452.0 0.0   1   0.0 0.0 21452.0, 21452.0 -1.07
BXA24/PgnJ m 93580.0 0.0   1   0.0 0.0 93580.0, 93580.0 0.63
BXA25/PgnJ m 63226.0 0.0   1   0.0 0.0 63226.0, 63226.0 -0.08
BXA26/PgnJ m 113739.0 0.0   1   0.0 0.0 113739.0, 113739.0 1.11
BXA2/PgnJ m 60278.0 0.0   1   0.0 0.0 60278.0, 60278.0 -0.15
BXA4/PgnJ m 90514.0 0.0   1   0.0 0.0 90514.0, 90514.0 0.56
BXA7/PgnJ m 60388.0 0.0   1   0.0 0.0 60388.0, 60388.0 -0.15
BXA8/PgnJ m 83574.0 0.0   1   0.0 0.0 83574.0, 83574.0 0.39
BXD11/TyJ m 58672.0 0.0   1   0.0 0.0 58672.0, 58672.0 -0.19
BXD12/TyJ m 70096.0 0.0   1   0.0 0.0 70096.0, 70096.0 0.08
BXD13/TyJ m 16576.0 0.0   1   0.0 0.0 16576.0, 16576.0 -1.18
BXD14/TyJ m 14846.0 0.0   1   0.0 0.0 14846.0, 14846.0 -1.22
BXD15/TyJ m 66310.0 0.0   1   0.0 0.0 66310.0, 66310.0 -0.01
BXD18/TyJ m 18397.0 0.0   1   0.0 0.0 18397.0, 18397.0 -1.14
BXD19/TyJ m 64938.0 8993.0   2   6359.0 0.138 58578.0, 71297.0 -0.04
BXD1/TyJ m 59858.0 0.0   1   0.0 0.0 59858.0, 59858.0 -0.16
BXD20/TyJ m 22428.0 0.0   1   0.0 0.0 22428.0, 22428.0 -1.05
BXD21/TyJ m 26605.0 0.0   1   0.0 0.0 26605.0, 26605.0 -0.95
BXD22/TyJ m 59681.0 0.0   1   0.0 0.0 59681.0, 59681.0 -0.17
BXD24/TyJ m 60831.0 0.0   1   0.0 0.0 60831.0, 60831.0 -0.14
BXD24/TyJ-Cep290rd16/J m 23966.0 0.0   1   0.0 0.0 23966.0, 23966.0 -1.01
BXD28/TyJ m 42965.0 3543.0   2   2506.0 0.0825 40459.0, 45470.0 -0.56
BXD29-Tlr4lps-2J/J m 29174.0 0.0   1   0.0 0.0 29174.0, 29174.0 -0.89
BXD2/TyJ m 28818.0 0.0   1   0.0 0.0 28818.0, 28818.0 -0.9
BXD32/TyJ m 50419.0 0.0   1   0.0 0.0 50419.0, 50419.0 -0.39
BXD33/TyJ m 21131.0 0.0   1   0.0 0.0 21131.0, 21131.0 -1.08
BXD34/TyJ m 72696.0 0.0   1   0.0 0.0 72696.0, 72696.0 0.14
BXD36/TyJ m 13900.0 0.0   1   0.0 0.0 13900.0, 13900.0 -1.25
BXD38/TyJ m 12594.0 0.0   1   0.0 0.0 12594.0, 12594.0 -1.28
BXD39/TyJ m 126799.0 0.0   1   0.0 0.0 126799.0, 126799.0 1.41
BXD40/TyJ m 16684.0 0.0   1   0.0 0.0 16684.0, 16684.0 -1.18
BXD42/TyJ m 50884.0 0.0   1   0.0 0.0 50884.0, 50884.0 -0.38
BXD5/TyJ m 62170.0 0.0   1   0.0 0.0 62170.0, 62170.0 -0.11
BXD6/TyJ m 59571.0 0.0   1   0.0 0.0 59571.0, 59571.0 -0.17
BXD8/TyJ m 32502.0 0.0   1   0.0 0.0 32502.0, 32502.0 -0.81
BXD9/TyJ m 31327.0 0.0   1   0.0 0.0 31327.0, 31327.0 -0.84
BXH10/TyJ m 34809.0 0.0   1   0.0 0.0 34809.0, 34809.0 -0.75
BXH19/TyJ m 60101.0 0.0   1   0.0 0.0 60101.0, 60101.0 -0.16
BXH20/KccJ m 10282.0 0.0   1   0.0 0.0 10282.0, 10282.0 -1.33
BXH22/KccJ m 102789.0 0.0   1   0.0 0.0 102789.0, 102789.0 0.85
BXH2/TyJ m 70584.0 0.0   1   0.0 0.0 70584.0, 70584.0 0.09
BXH4/TyJ m 46073.0 4949.0   2   3500.0 0.107 42573.0, 49573.0 -0.49
BXH6/TyJ m 51487.0 0.0   1   0.0 0.0 51487.0, 51487.0 -0.36
BXH7/TyJ m 49931.0 0.0   1   0.0 0.0 49931.0, 49931.0 -0.4
BXH8/TyJ m 47665.0 0.0   1   0.0 0.0 47665.0, 47665.0 -0.45
BXH9/TyJ m 56648.0 0.0   1   0.0 0.0 56648.0, 56648.0 -0.24
C3H/HeJ m 87001.0 21425.0   2   15149.0 0.246 71852.0, 102151.0 0.48
C57BL/6J m 52816.0 20625.0   5 9224.0 0.391 36708.0, 75984.0 -0.33
C57L/J m 11034.0 0.0   1   0.0 0.0 11034.0, 11034.0 -1.31
CAST/EiJ m 174050.0 0.0   1   0.0 0.0 174050.0, 174050.0 2.53
CBA/J m 115070.0 0.0   1   0.0 0.0 115070.0, 115070.0 1.14
CE/J m 128806.0 0.0   1   0.0 0.0 128806.0, 128806.0 1.46
CXB11/HiAJ m 16377.0 3147.0   2   2225.0 0.192 14152.0, 18603.0 -1.19
CXB12/HiAJ m 90659.0 11235.0   2   7944.0 0.124 82714.0, 98603.0 0.56
CXB13/HiAJ m 56794.0 3244.0   3 1873.0 0.0571 53090.0, 59129.0 -0.24
CXB1/ByJ m 129131.0 68978.0   3 39824.0 0.534 74024.0, 206487.0 1.47
CXB2/ByJ m 54885.0 24552.0   3 14175.0 0.447 30265.0, 79368.0 -0.28
CXB3/ByJ m 31769.0 10210.0   2   7219.0 0.321 24549.0, 38988.0 -0.83
CXB4/ByJ m 58818.0 10132.0   2   7164.0 0.172 51654.0, 65982.0 -0.19
CXB6/ByJ m 46918.0 15348.0   3 8861.0 0.327 35053.0, 64250.0 -0.47
CXB7/ByJ m 53087.0 26769.0   2   18928.0 0.504 34159.0, 72015.0 -0.32
CXB8/HiAJ m 43797.0 664.0   3 384.0 0.0152 43098.0, 44420.0 -0.54
CXB9/HiAJ m 41543.0 34675.0   3 20019.0 0.835 20878.0, 81575.0 -0.6
DBA/2J m 87610.0 6301.0   4 3151.0 0.0719 78195.0, 91538.0 0.49
FVB/NJ m 25183.0 0.0   1   0.0 0.0 25183.0, 25183.0 -0.98
I/LnJ m 56963.0 0.0   1   0.0 0.0 56963.0, 56963.0 -0.23
KK/HlJ m 57379.0 0.0   1   0.0 0.0 57379.0, 57379.0 -0.22
LG/J m 122044.0 0.0   1   0.0 0.0 122044.0, 122044.0 1.3
LP/J m 44307.0 0.0   1   0.0 0.0 44307.0, 44307.0 -0.53
MA/MyJ m 176905.0 0.0   1   0.0 0.0 176905.0, 176905.0 2.59
NOD/ShiLtJ m 280936.0 0.0   1   0.0 0.0 280936.0, 280936.0 5.04
NON/ShiLtJ m 32496.0 0.0   1   0.0 0.0 32496.0, 32496.0 -0.81
NZW/LacJ m 63019.0 0.0   1   0.0 0.0 63019.0, 63019.0 -0.09
PL/J m 92446.0 0.0   1   0.0 0.0 92446.0, 92446.0 0.6
RIIIS/J m 66036.0 0.0   1   0.0 0.0 66036.0, 66036.0 -0.02
SEA/GnJ m 75135.0 0.0   1   0.0 0.0 75135.0, 75135.0 0.2
SJL/J m 35728.0 0.0   1   0.0 0.0 35728.0, 35728.0 -0.73
SM/J m 21860.0 0.0   1   0.0 0.0 21860.0, 21860.0 -1.06
SWR/J m 106795.0 0.0   1   0.0 0.0 106795.0, 106795.0 0.94


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 102518.15 17947.8268 138992.5225 66043.7775
AXB19b/PgnJ m 78385.9 17947.8268 114860.2725 41911.5275
AXB24/PgnJ m 55420.5 17947.8268 91894.8725 18946.1275
BALB/cJ m 117289.1333 14654.3392 147070.3338 87507.9329
BXA16/PgnJ m 69611.45 17947.8268 106085.8225 33137.0775
BXD19/TyJ m 64937.65 17947.8268 101412.0225 28463.2775
BXD28/TyJ m 42964.6 17947.8268 79438.9725 6490.2275
BXH4/TyJ m 46073.05 17947.8268 82547.4225 9598.6775
C3H/HeJ m 87001.25 17947.8268 123475.6225 50526.8775
C57BL/6J m 52815.58 11351.2024 75883.9987 29747.1613
CXB11/HiAJ m 16377.35 17947.8268 52851.7225 0.0
CXB12/HiAJ m 90658.65 17947.8268 127133.0225 54184.2775
CXB13/HiAJ m 56793.9667 14654.3392 86575.1671 27012.7662
CXB1/ByJ m 129131.0 14654.3392 158912.2005 99349.7995
CXB2/ByJ m 54885.2667 14654.3392 84666.4671 25104.0662
CXB3/ByJ m 31768.55 17947.8268 68242.9225 0.0
CXB4/ByJ m 58818.3 17947.8268 95292.6725 22343.9275
CXB6/ByJ m 46917.5 14654.3392 76698.7005 17136.2995
CXB7/ByJ m 53086.9 17947.8268 89561.2725 16612.5275
CXB8/HiAJ m 43796.7667 14654.3392 73577.9671 14015.5662
CXB9/HiAJ m 41543.0333 14654.3392 71324.2338 11761.8329
DBA/2J m 87609.5 12691.0301 113400.7761 61818.2239




  GWAS USING LINEAR MIXED MODELS