Phenotype measure:   HMDPpheno7   gluconate

ID, description, units MPD:50215   gluconate   liver gluconate (16h fast), relative abundance  
Data set, strains HMDPpheno7   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno7 - liver gluconate (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means290153   None
Median of the strain means286716   None
SD of the strain means± 86294
Coefficient of variation (CV)0.297
Min–max range of strain means67981   –   519713   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 189682977207.257 9032522724.1551 1.4267 0.174
Residuals 34 215253935539.344 6330998104.0984


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 199645.0 0.0   1   0.0 0.0 199645.0, 199645.0 -1.05
A/J m 258133.0 112906.0   2   79837.0 0.437 178296.0, 337969.0 -0.37
AKR/J m 281342.0 0.0   1   0.0 0.0 281342.0, 281342.0 -0.1
AXB10/PgnJ m 287167.0 0.0   1   0.0 0.0 287167.0, 287167.0 -0.03
AXB12/PgnJ m 272472.0 0.0   1   0.0 0.0 272472.0, 272472.0 -0.2
AXB13/PgnJ m 339410.0 0.0   1   0.0 0.0 339410.0, 339410.0 0.57
AXB15/PgnJ m 330986.0 0.0   1   0.0 0.0 330986.0, 330986.0 0.47
AXB19a/PgnJ m 300355.0 0.0   1   0.0 0.0 300355.0, 300355.0 0.12
AXB19b/PgnJ m 349101.0 840.0   2   594.0 0.00241 348507.0, 349695.0 0.68
AXB19/PgnJ m 311329.0 0.0   1   0.0 0.0 311329.0, 311329.0 0.25
AXB1/PgnJ m 155784.0 0.0   1   0.0 0.0 155784.0, 155784.0 -1.56
AXB23/PgnJ m 219373.0 0.0   1   0.0 0.0 219373.0, 219373.0 -0.82
AXB24/PgnJ m 326150.0 111533.0   2   78866.0 0.342 247284.0, 405015.0 0.42
AXB2/PgnJ m 147956.0 0.0   1   0.0 0.0 147956.0, 147956.0 -1.65
AXB4/PgnJ m 371808.0 0.0   1   0.0 0.0 371808.0, 371808.0 0.95
AXB5/PgnJ m 200138.0 0.0   1   0.0 0.0 200138.0, 200138.0 -1.04
AXB6/PgnJ m 287735.0 0.0   1   0.0 0.0 287735.0, 287735.0 -0.03
AXB8/PgnJ m 226101.0 0.0   1   0.0 0.0 226101.0, 226101.0 -0.74
BALB/cJ m 289568.0 94171.0   3 54369.0 0.325 180851.0, 345808.0 -0.01
BTBR T+ Itpr3tf/J m 250505.0 0.0   1   0.0 0.0 250505.0, 250505.0 -0.46
BUB/BnJ m 155739.0 0.0   1   0.0 0.0 155739.0, 155739.0 -1.56
BXA11/PgnJ m 446728.0 0.0   1   0.0 0.0 446728.0, 446728.0 1.81
BXA12/PgnJ m 67981.0 0.0   1   0.0 0.0 67981.0, 67981.0 -2.57
BXA13/PgnJ m 255676.0 0.0   1   0.0 0.0 255676.0, 255676.0 -0.4
BXA14/PgnJ m 367156.0 0.0   1   0.0 0.0 367156.0, 367156.0 0.89
BXA16/PgnJ m 330924.0 98244.0   2   69469.0 0.297 261455.0, 400394.0 0.47
BXA1/PgnJ m 397310.0 0.0   1   0.0 0.0 397310.0, 397310.0 1.24
BXA24/PgnJ m 446931.0 0.0   1   0.0 0.0 446931.0, 446931.0 1.82
BXA25/PgnJ m 155036.0 0.0   1   0.0 0.0 155036.0, 155036.0 -1.57
BXA26/PgnJ m 251995.0 0.0   1   0.0 0.0 251995.0, 251995.0 -0.44
BXA2/PgnJ m 375864.0 0.0   1   0.0 0.0 375864.0, 375864.0 0.99
BXA4/PgnJ m 203182.0 0.0   1   0.0 0.0 203182.0, 203182.0 -1.01
BXA7/PgnJ m 353192.0 0.0   1   0.0 0.0 353192.0, 353192.0 0.73
BXA8/PgnJ m 279933.0 0.0   1   0.0 0.0 279933.0, 279933.0 -0.12
BXD11/TyJ m 255589.0 0.0   1   0.0 0.0 255589.0, 255589.0 -0.4
BXD12/TyJ m 351872.0 0.0   1   0.0 0.0 351872.0, 351872.0 0.72
BXD13/TyJ m 381273.0 0.0   1   0.0 0.0 381273.0, 381273.0 1.06
BXD14/TyJ m 343696.0 0.0   1   0.0 0.0 343696.0, 343696.0 0.62
BXD15/TyJ m 519713.0 0.0   1   0.0 0.0 519713.0, 519713.0 2.66
BXD18/TyJ m 234952.0 0.0   1   0.0 0.0 234952.0, 234952.0 -0.64
BXD19/TyJ m 359578.0 128520.0   2   90877.0 0.357 268701.0, 450455.0 0.8
BXD1/TyJ m 453775.0 0.0   1   0.0 0.0 453775.0, 453775.0 1.9
BXD20/TyJ m 334918.0 0.0   1   0.0 0.0 334918.0, 334918.0 0.52
BXD21/TyJ m 237961.0 0.0   1   0.0 0.0 237961.0, 237961.0 -0.6
BXD22/TyJ m 458808.0 0.0   1   0.0 0.0 458808.0, 458808.0 1.95
BXD24/TyJ m 239187.0 0.0   1   0.0 0.0 239187.0, 239187.0 -0.59
BXD24/TyJ-Cep290rd16/J m 302783.0 0.0   1   0.0 0.0 302783.0, 302783.0 0.15
BXD28/TyJ m 286264.0 44375.0   2   31378.0 0.155 254886.0, 317642.0 -0.05
BXD29-Tlr4lps-2J/J m 340614.0 0.0   1   0.0 0.0 340614.0, 340614.0 0.58
BXD2/TyJ m 348754.0 0.0   1   0.0 0.0 348754.0, 348754.0 0.68
BXD32/TyJ m 301090.0 0.0   1   0.0 0.0 301090.0, 301090.0 0.13
BXD33/TyJ m 485719.0 0.0   1   0.0 0.0 485719.0, 485719.0 2.27
BXD34/TyJ m 254012.0 0.0   1   0.0 0.0 254012.0, 254012.0 -0.42
BXD36/TyJ m 281882.0 0.0   1   0.0 0.0 281882.0, 281882.0 -0.1
BXD38/TyJ m 199779.0 0.0   1   0.0 0.0 199779.0, 199779.0 -1.05
BXD39/TyJ m 449435.0 0.0   1   0.0 0.0 449435.0, 449435.0 1.85
BXD40/TyJ m 349694.0 0.0   1   0.0 0.0 349694.0, 349694.0 0.69
BXD42/TyJ m 289209.0 0.0   1   0.0 0.0 289209.0, 289209.0 -0.01
BXD5/TyJ m 336778.0 0.0   1   0.0 0.0 336778.0, 336778.0 0.54
BXD6/TyJ m 437820.0 0.0   1   0.0 0.0 437820.0, 437820.0 1.71
BXD8/TyJ m 265841.0 0.0   1   0.0 0.0 265841.0, 265841.0 -0.28
BXD9/TyJ m 399810.0 0.0   1   0.0 0.0 399810.0, 399810.0 1.27
BXH10/TyJ m 274007.0 0.0   1   0.0 0.0 274007.0, 274007.0 -0.19
BXH19/TyJ m 283428.0 0.0   1   0.0 0.0 283428.0, 283428.0 -0.08
BXH20/KccJ m 323092.0 0.0   1   0.0 0.0 323092.0, 323092.0 0.38
BXH22/KccJ m 322261.0 0.0   1   0.0 0.0 322261.0, 322261.0 0.37
BXH2/TyJ m 350513.0 0.0   1   0.0 0.0 350513.0, 350513.0 0.7
BXH4/TyJ m 341928.0 1044.0   2   738.0 0.00305 341190.0, 342666.0 0.6
BXH6/TyJ m 392249.0 0.0   1   0.0 0.0 392249.0, 392249.0 1.18
BXH7/TyJ m 385706.0 0.0   1   0.0 0.0 385706.0, 385706.0 1.11
BXH8/TyJ m 296047.0 0.0   1   0.0 0.0 296047.0, 296047.0 0.07
BXH9/TyJ m 238556.0 0.0   1   0.0 0.0 238556.0, 238556.0 -0.6
C3H/HeJ m 222404.0 33858.0   2   23941.0 0.152 198463.0, 246346.0 -0.79
C57BL/6J m 220435.0 62314.0   5 27868.0 0.283 131442.0, 301812.0 -0.81
C57L/J m 74982.0 0.0   1   0.0 0.0 74982.0, 74982.0 -2.49
C58/J m 305047.0 0.0   1   0.0 0.0 305047.0, 305047.0 0.17
CAST/EiJ m 265547.0 0.0   1   0.0 0.0 265547.0, 265547.0 -0.29
CBA/J m 207084.0 0.0   1   0.0 0.0 207084.0, 207084.0 -0.96
CE/J m 185330.0 0.0   1   0.0 0.0 185330.0, 185330.0 -1.21
CXB11/HiAJ m 223034.0 117521.0   2   83100.0 0.527 139934.0, 306134.0 -0.78
CXB12/HiAJ m 286248.0 10568.0   2   7473.0 0.0369 278776.0, 293721.0 -0.05
CXB13/HiAJ m 263279.0 94557.0   3 54593.0 0.359 154640.0, 327041.0 -0.31
CXB1/ByJ m 291175.0 40921.0   3 23626.0 0.141 249936.0, 331771.0 0.01
CXB2/ByJ m 208045.0 127859.0   3 73819.0 0.615 88155.0, 342606.0 -0.95
CXB3/ByJ m 307054.0 57139.0   2   40404.0 0.186 266650.0, 347458.0 0.2
CXB4/ByJ m 413435.0 32993.0   2   23329.0 0.0798 390106.0, 436765.0 1.43
CXB6/ByJ m 168803.0 123685.0   3 71410.0 0.733 74322.0, 308796.0 -1.41
CXB7/ByJ m 378259.0 15739.0   2   11129.0 0.0416 367130.0, 389388.0 1.02
CXB8/HiAJ m 288525.0 57825.0   3 33385.0 0.2 248629.0, 354841.0 -0.02
CXB9/HiAJ m 236543.0 58006.0   3 33490.0 0.245 174079.0, 288713.0 -0.62
DBA/2J m 255450.0 60685.0   4 30342.0 0.238 170766.0, 314718.0 -0.4
FVB/NJ m 122984.0 0.0   1   0.0 0.0 122984.0, 122984.0 -1.94
I/LnJ m 403039.0 0.0   1   0.0 0.0 403039.0, 403039.0 1.31
KK/HlJ m 260544.0 0.0   1   0.0 0.0 260544.0, 260544.0 -0.34
LG/J m 273523.0 0.0   1   0.0 0.0 273523.0, 273523.0 -0.19
LP/J m 250065.0 0.0   1   0.0 0.0 250065.0, 250065.0 -0.46
MA/MyJ m 168062.0 0.0   1   0.0 0.0 168062.0, 168062.0 -1.41
NOD/ShiLtJ m 154428.0 0.0   1   0.0 0.0 154428.0, 154428.0 -1.57
NON/ShiLtJ m 188610.0 0.0   1   0.0 0.0 188610.0, 188610.0 -1.18
NZW/LacJ m 331393.0 0.0   1   0.0 0.0 331393.0, 331393.0 0.48
PL/J m 295489.0 0.0   1   0.0 0.0 295489.0, 295489.0 0.06
RIIIS/J m 229819.0 0.0   1   0.0 0.0 229819.0, 229819.0 -0.7
SEA/GnJ m 232464.0 0.0   1   0.0 0.0 232464.0, 232464.0 -0.67
SJL/J m 282859.0 0.0   1   0.0 0.0 282859.0, 282859.0 -0.08
SM/J m 212438.0 0.0   1   0.0 0.0 212438.0, 212438.0 -0.9
SWR/J m 348572.0 0.0   1   0.0 0.0 348572.0, 348572.0 0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 258132.7 56262.7679 372472.4011 143792.9989
AXB19b/PgnJ m 349101.05 56262.7679 463440.7511 234761.3489
AXB24/PgnJ m 326149.75 56262.7679 440489.4511 211810.0489
BALB/cJ m 289568.1 45938.3576 382926.0751 196210.1249
BXA16/PgnJ m 330924.4 56262.7679 445264.1011 216584.6989
BXD19/TyJ m 359577.95 56262.7679 473917.6511 245238.2489
BXD28/TyJ m 286264.15 56262.7679 400603.8511 171924.4489
BXH4/TyJ m 341928.35 56262.7679 456268.0511 227588.6489
C3H/HeJ m 222404.4 56262.7679 336744.1011 108064.6989
C57BL/6J m 220434.7 35583.6988 292749.4765 148119.9235
CXB11/HiAJ m 223034.4 56262.7679 337374.1011 108694.6989
CXB12/HiAJ m 286248.35 56262.7679 400588.0511 171908.6489
CXB13/HiAJ m 263279.4667 45938.3576 356637.4417 169921.4916
CXB1/ByJ m 291175.2 45938.3576 384533.1751 197817.2249
CXB2/ByJ m 208045.0667 45938.3576 301403.0417 114687.0916
CXB3/ByJ m 307054.1 56262.7679 421393.8011 192714.3989
CXB4/ByJ m 413435.4 56262.7679 527775.1011 299095.6989
CXB6/ByJ m 168803.1667 45938.3576 262161.1417 75445.1916
CXB7/ByJ m 378259.1 56262.7679 492598.8011 263919.3989
CXB8/HiAJ m 288524.7333 45938.3576 381882.7084 195166.7583
CXB9/HiAJ m 236543.3 45938.3576 329901.2751 143185.3249
DBA/2J m 255449.875 39783.7847 336300.253 174599.497




  GWAS USING LINEAR MIXED MODELS