Project measure / variable:   HMDPpheno7   lactate

ID, description, units MPD:50213   lactate   liver lactate (16h fast), relative abundance    
Data set, strains HMDPpheno7   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno7 - liver lactate (16h fast), relative abundance

CXB4/ByJBXH19/TyJBXA14/PgnJCXB8/HiAJCXB1/ByJAXB19a/PgnJBXH8/TyJCXB7/ByJBXD14/TyJCXB3/ByJAXB19/PgnJBXA24/PgnJAXB19b/PgnJCXB9/HiAJBXD5/TyJBXH20/KccJNON/ShiLtJCXB13/HiAJAXB10/PgnJAXB24/PgnJSWR/JBXH6/TyJCXB12/HiAJBXD39/TyJBXH2/TyJBXA2/PgnJAXB8/PgnJC3H/HeJBXD33/TyJA/JBXA8/PgnJBXA16/PgnJBXA4/PgnJBXA1/PgnJBXA13/PgnJCAST/EiJBXH4/TyJBXA26/PgnJBXA7/PgnJCXB11/HiAJBXH9/TyJBTBR T<+> Itpr3<tf>/JCXB2/ByJBXD2/TyJBXD28/TyJBXD32/TyJBXD13/TyJBXD19/TyJBXD6/TyJBALB/cJC57BL/6JI/LnJBXD8/TyJBXH10/TyJBXD1/TyJAXB5/PgnJBXD21/TyJCXB6/ByJBXA25/PgnJBXD9/TyJNZW/LacJAKR/JCE/JAXB15/PgnJPL/JAXB6/PgnJLP/JBXD42/TyJAXB4/PgnJC58/JSJL/JBXD20/TyJAXB13/PgnJAXB23/PgnJBXD22/TyJCBA/JSEA/GnJBXH7/TyJKK/HlJ129X1/SvJBXH22/KccJBXD29-Tlr4<lps-2J>/JBXD36/TyJDBA/2JFVB/NJNOD/ShiLtJBUB/BnJLG/JAXB12/PgnJBXA11/PgnJBXD40/TyJBXD18/TyJBXD11/TyJBXD24/TyJSM/JRIIIS/JAXB1/PgnJBXD15/TyJBXD24/TyJ-Cep290<rd16>/JBXD12/TyJAXB2/PgnJMA/MyJBXA12/PgnJBXD34/TyJBXD38/TyJC57L/J (no units) 10,000,00020,000,00030,000,00040,000,00050,000,00060,000,00070,000,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means28647777   None
Median of the strain means26158098   None
SD of the strain means± 12202342
Coefficient of variation (CV)0.426
Min–max range of strain means8357052   –   65987018   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 8231081604557680.0 391956266883699.0 5.5764 < 0.0001
Residuals 34 2389789130164890.0 70287915593085.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 19772260.0 0.0   1   0.0 0.0 19772260.0, 19772260.0 -0.73
A/J m 33736447.0 10978519.0   2   7762985.0 0.325 25973462.0, 41499432.0 0.42
AKR/J m 24961398.0 0.0   1   0.0 0.0 24961398.0, 24961398.0 -0.3
AXB10/PgnJ m 38890492.0 0.0   1   0.0 0.0 38890492.0, 38890492.0 0.84
AXB12/PgnJ m 17089786.0 0.0   1   0.0 0.0 17089786.0, 17089786.0 -0.95
AXB13/PgnJ m 22156330.0 0.0   1   0.0 0.0 22156330.0, 22156330.0 -0.53
AXB15/PgnJ m 24187560.0 0.0   1   0.0 0.0 24187560.0, 24187560.0 -0.37
AXB19a/PgnJ m 52613404.0 0.0   1   0.0 0.0 52613404.0, 52613404.0 1.96
AXB19b/PgnJ m 43662104.0 9755856.0   2   6898432.0 0.223 36763672.0, 50560536.0 1.23
AXB19/PgnJ m 44824336.0 0.0   1   0.0 0.0 44824336.0, 44824336.0 1.33
AXB1/PgnJ m 14750693.0 0.0   1   0.0 0.0 14750693.0, 14750693.0 -1.14
AXB23/PgnJ m 21575830.0 0.0   1   0.0 0.0 21575830.0, 21575830.0 -0.58
AXB24/PgnJ m 38469470.0 19961260.0   2   14114742.0 0.519 24354728.0, 52584212.0 0.8
AXB2/PgnJ m 13810505.0 0.0   1   0.0 0.0 13810505.0, 13810505.0 -1.22
AXB4/PgnJ m 22738068.0 0.0   1   0.0 0.0 22738068.0, 22738068.0 -0.48
AXB5/PgnJ m 25587872.0 0.0   1   0.0 0.0 25587872.0, 25587872.0 -0.25
AXB6/PgnJ m 23674894.0 0.0   1   0.0 0.0 23674894.0, 23674894.0 -0.41
AXB8/PgnJ m 35059664.0 0.0   1   0.0 0.0 35059664.0, 35059664.0 0.53
BALB/cJ m 26795101.0 10827483.0   3 6251250.0 0.404 18142212.0, 38936916.0 -0.15
BTBR T+ Itpr3tf/J m 28698404.0 0.0   1   0.0 0.0 28698404.0, 28698404.0 0.0
BUB/BnJ m 17475056.0 0.0   1   0.0 0.0 17475056.0, 17475056.0 -0.92
BXA11/PgnJ m 16991642.0 0.0   1   0.0 0.0 16991642.0, 16991642.0 -0.96
BXA12/PgnJ m 12830346.0 0.0   1   0.0 0.0 12830346.0, 12830346.0 -1.3
BXA13/PgnJ m 32042806.0 0.0   1   0.0 0.0 32042806.0, 32042806.0 0.28
BXA14/PgnJ m 62850440.0 0.0   1   0.0 0.0 62850440.0, 62850440.0 2.8
BXA16/PgnJ m 33450844.0 363628.0   2   257124.0 0.0109 33193720.0, 33707968.0 0.39
BXA1/PgnJ m 32490170.0 0.0   1   0.0 0.0 32490170.0, 32490170.0 0.31
BXA24/PgnJ m 44459024.0 0.0   1   0.0 0.0 44459024.0, 44459024.0 1.3
BXA25/PgnJ m 25082920.0 0.0   1   0.0 0.0 25082920.0, 25082920.0 -0.29
BXA26/PgnJ m 31399094.0 0.0   1   0.0 0.0 31399094.0, 31399094.0 0.23
BXA2/PgnJ m 36024836.0 0.0   1   0.0 0.0 36024836.0, 36024836.0 0.6
BXA4/PgnJ m 33424138.0 0.0   1   0.0 0.0 33424138.0, 33424138.0 0.39
BXA7/PgnJ m 30597004.0 0.0   1   0.0 0.0 30597004.0, 30597004.0 0.16
BXA8/PgnJ m 33632100.0 0.0   1   0.0 0.0 33632100.0, 33632100.0 0.41
BXD11/TyJ m 15811837.0 0.0   1   0.0 0.0 15811837.0, 15811837.0 -1.05
BXD12/TyJ m 14188110.0 0.0   1   0.0 0.0 14188110.0, 14188110.0 -1.18
BXD13/TyJ m 27217900.0 0.0   1   0.0 0.0 27217900.0, 27217900.0 -0.12
BXD14/TyJ m 48943916.0 0.0   1   0.0 0.0 48943916.0, 48943916.0 1.66
BXD15/TyJ m 14696699.0 0.0   1   0.0 0.0 14696699.0, 14696699.0 -1.14
BXD18/TyJ m 15903334.0 0.0   1   0.0 0.0 15903334.0, 15903334.0 -1.04
BXD19/TyJ m 27152960.0 426315.0   2   301450.0 0.0157 26851510.0, 27454410.0 -0.12
BXD1/TyJ m 25803700.0 0.0   1   0.0 0.0 25803700.0, 25803700.0 -0.23
BXD20/TyJ m 22312568.0 0.0   1   0.0 0.0 22312568.0, 22312568.0 -0.52
BXD21/TyJ m 25314552.0 0.0   1   0.0 0.0 25314552.0, 25314552.0 -0.27
BXD22/TyJ m 21446184.0 0.0   1   0.0 0.0 21446184.0, 21446184.0 -0.59
BXD24/TyJ m 15741007.0 0.0   1   0.0 0.0 15741007.0, 15741007.0 -1.06
BXD24/TyJ-Cep290rd16/J m 14331209.0 0.0   1   0.0 0.0 14331209.0, 14331209.0 -1.17
BXD28/TyJ m 28061169.0 1444459.0   2   1021387.0 0.0515 27039782.0, 29082556.0 -0.05
BXD29-Tlr4lps-2J/J m 18799274.0 0.0   1   0.0 0.0 18799274.0, 18799274.0 -0.81
BXD2/TyJ m 28222662.0 0.0   1   0.0 0.0 28222662.0, 28222662.0 -0.03
BXD32/TyJ m 27492212.0 0.0   1   0.0 0.0 27492212.0, 27492212.0 -0.09
BXD33/TyJ m 34470132.0 0.0   1   0.0 0.0 34470132.0, 34470132.0 0.48
BXD34/TyJ m 11498528.0 0.0   1   0.0 0.0 11498528.0, 11498528.0 -1.41
BXD36/TyJ m 18630248.0 0.0   1   0.0 0.0 18630248.0, 18630248.0 -0.82
BXD38/TyJ m 11268772.0 0.0   1   0.0 0.0 11268772.0, 11268772.0 -1.42
BXD39/TyJ m 36676252.0 0.0   1   0.0 0.0 36676252.0, 36676252.0 0.66
BXD40/TyJ m 16550459.0 0.0   1   0.0 0.0 16550459.0, 16550459.0 -0.99
BXD42/TyJ m 22768672.0 0.0   1   0.0 0.0 22768672.0, 22768672.0 -0.48
BXD5/TyJ m 41354220.0 0.0   1   0.0 0.0 41354220.0, 41354220.0 1.04
BXD6/TyJ m 27109550.0 0.0   1   0.0 0.0 27109550.0, 27109550.0 -0.13
BXD8/TyJ m 26212270.0 0.0   1   0.0 0.0 26212270.0, 26212270.0 -0.2
BXD9/TyJ m 25068884.0 0.0   1   0.0 0.0 25068884.0, 25068884.0 -0.29
BXH10/TyJ m 26103926.0 0.0   1   0.0 0.0 26103926.0, 26103926.0 -0.21
BXH19/TyJ m 65512216.0 0.0   1   0.0 0.0 65512216.0, 65512216.0 3.02
BXH20/KccJ m 39770616.0 0.0   1   0.0 0.0 39770616.0, 39770616.0 0.91
BXH22/KccJ m 19511440.0 0.0   1   0.0 0.0 19511440.0, 19511440.0 -0.75
BXH2/TyJ m 36333048.0 0.0   1   0.0 0.0 36333048.0, 36333048.0 0.63
BXH4/TyJ m 31709097.0 10598992.0   2   7494619.0 0.334 24214478.0, 39203716.0 0.25
BXH6/TyJ m 38152424.0 0.0   1   0.0 0.0 38152424.0, 38152424.0 0.78
BXH7/TyJ m 20289136.0 0.0   1   0.0 0.0 20289136.0, 20289136.0 -0.69
BXH8/TyJ m 49123024.0 0.0   1   0.0 0.0 49123024.0, 49123024.0 1.68
BXH9/TyJ m 29159598.0 0.0   1   0.0 0.0 29159598.0, 29159598.0 0.04
C3H/HeJ m 34963185.0 6682480.0   2   4725227.0 0.191 30237958.0, 39688412.0 0.52
C57BL/6J m 26407535.0 8355324.0   5 3736615.0 0.316 14653545.0, 37730804.0 -0.18
C57L/J m 8357052.0 0.0   1   0.0 0.0 8357052.0, 8357052.0 -1.66
C58/J m 22546750.0 0.0   1   0.0 0.0 22546750.0, 22546750.0 -0.5
CAST/EiJ m 31731210.0 0.0   1   0.0 0.0 31731210.0, 31731210.0 0.25
CBA/J m 20982618.0 0.0   1   0.0 0.0 20982618.0, 20982618.0 -0.63
CE/J m 24370614.0 0.0   1   0.0 0.0 24370614.0, 24370614.0 -0.35
CXB11/HiAJ m 29345332.0 4065887.0   2   2875016.0 0.139 26470316.0, 32220348.0 0.06
CXB12/HiAJ m 37262828.0 3603671.0   2   2548180.0 0.0967 34714648.0, 39811008.0 0.71
CXB13/HiAJ m 39157765.0 11444017.0   3 6607206.0 0.292 26124914.0, 47564728.0 0.86
CXB1/ByJ m 54484679.0 7860449.0   3 4538232.0 0.144 46378688.0, 62074104.0 2.12
CXB2/ByJ m 28604341.0 10423277.0   3 6017882.0 0.364 16770281.0, 36421628.0 0.0
CXB3/ByJ m 47219054.0 2114382.0   2   1495094.0 0.0448 45723960.0, 48714148.0 1.52
CXB4/ByJ m 65987018.0 10803344.0   2   7639118.0 0.164 58347900.0, 73626136.0 3.06
CXB6/ByJ m 25159224.0 2791747.0   3 1611816.0 0.111 23206452.0, 28356840.0 -0.29
CXB7/ByJ m 49073712.0 1392039.0   2   984320.0 0.0284 48089392.0, 50058032.0 1.67
CXB8/HiAJ m 59177779.0 8860761.0   3 5115763.0 0.15 50442828.0, 68159208.0 2.5
CXB9/HiAJ m 42954265.0 9124860.0   3 5268240.0 0.212 33564116.0, 51788408.0 1.17
DBA/2J m 18416947.0 1628007.0   4 814003.0 0.0884 16275951.0, 20098030.0 -0.84
FVB/NJ m 17990342.0 0.0   1   0.0 0.0 17990342.0, 17990342.0 -0.87
I/LnJ m 26282042.0 0.0   1   0.0 0.0 26282042.0, 26282042.0 -0.19
KK/HlJ m 20063462.0 0.0   1   0.0 0.0 20063462.0, 20063462.0 -0.7
LG/J m 17353338.0 0.0   1   0.0 0.0 17353338.0, 17353338.0 -0.93
LP/J m 23138878.0 0.0   1   0.0 0.0 23138878.0, 23138878.0 -0.45
MA/MyJ m 13369329.0 0.0   1   0.0 0.0 13369329.0, 13369329.0 -1.25
NOD/ShiLtJ m 17756378.0 0.0   1   0.0 0.0 17756378.0, 17756378.0 -0.89
NON/ShiLtJ m 39475308.0 0.0   1   0.0 0.0 39475308.0, 39475308.0 0.89
NZW/LacJ m 24964980.0 0.0   1   0.0 0.0 24964980.0, 24964980.0 -0.3
PL/J m 23889820.0 0.0   1   0.0 0.0 23889820.0, 23889820.0 -0.39
RIIIS/J m 14894400.0 0.0   1   0.0 0.0 14894400.0, 14894400.0 -1.13
SEA/GnJ m 20911404.0 0.0   1   0.0 0.0 20911404.0, 20911404.0 -0.63
SJL/J m 22402192.0 0.0   1   0.0 0.0 22402192.0, 22402192.0 -0.51
SM/J m 15066794.0 0.0   1   0.0 0.0 15066794.0, 15066794.0 -1.11
SWR/J m 38386976.0 0.0   1   0.0 0.0 38386976.0, 38386976.0 0.8


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 33736447.0 5928233.9526 45784067.9001 21688826.0999
AXB19b/PgnJ m 43662104.0 5928233.9526 55709724.9001 31614483.0999
AXB24/PgnJ m 38469470.0 5928233.9526 50517090.9001 26421849.0999
BALB/cJ m 26795101.3333 4840382.7532 36631942.6066 16958260.0601
BXA16/PgnJ m 33450844.0 5928233.9526 45498464.9001 21403223.0999
BXD19/TyJ m 27152960.0 5928233.9526 39200580.9001 15105339.0999
BXD28/TyJ m 28061169.0 5928233.9526 40108789.9001 16013548.0999
BXH4/TyJ m 31709097.0 5928233.9526 43756717.9001 19661476.0999
C3H/HeJ m 34963185.0 5928233.9526 47010805.9001 22915564.0999
C57BL/6J m 26407535.4 3749344.3585 34027119.8861 18787950.9139
CXB11/HiAJ m 29345332.0 5928233.9526 41392952.9001 17297711.0999
CXB12/HiAJ m 37262828.0 5928233.9526 49310448.9001 25215207.0999
CXB13/HiAJ m 39157764.6667 4840382.7532 48994605.9399 29320923.3934
CXB1/ByJ m 54484678.6667 4840382.7532 64321519.9399 44647837.3934
CXB2/ByJ m 28604341.0 4840382.7532 38441182.2732 18767499.7268
CXB3/ByJ m 47219054.0 5928233.9526 59266674.9001 35171433.0999
CXB4/ByJ m 65987018.0 5928233.9526 78034638.9001 53939397.0999
CXB6/ByJ m 25159224.0 4840382.7532 34996065.2732 15322382.7268
CXB7/ByJ m 49073712.0 5928233.9526 61121332.9001 37026091.0999
CXB8/HiAJ m 59177778.6667 4840382.7532 69014619.9399 49340937.3934
CXB9/HiAJ m 42954265.3333 4840382.7532 52791106.6066 33117424.0601
DBA/2J m 18416946.75 4191894.4283 26935901.1856 9897992.3144




  GWAS USING LINEAR MIXED MODELS

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