Project measure / variable:   HMDPpheno7   anhydroglucitol

ID, description, units MPD:50209   anhydroglucitol   liver 1,5-anhydroglucitol (1,5-AG) (16h fast), relative abundance    
Data set, strains HMDPpheno7   HMDP   105 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno7 - liver 1,5-anhydroglucitol (1,5-AG) (16h fast), relative abundance

I/LnJBXD20/TyJC58/JCXB13/HiAJDBA/2JBXA2/PgnJBXD15/TyJBXD34/TyJBXA26/PgnJBXD39/TyJCXB4/ByJMA/MyJBXD24/TyJBXD22/TyJBXD1/TyJCXB8/HiAJBXH6/TyJCXB9/HiAJCXB11/HiAJAXB12/PgnJAXB13/PgnJCXB1/ByJBXD13/TyJSEA/GnJBXD5/TyJBXH22/KccJBUB/BnJBXA4/PgnJAXB8/PgnJCXB7/ByJBXA7/PgnJBXD11/TyJBXA14/PgnJAXB1/PgnJAXB6/PgnJBXD24/TyJ-Cep290<rd16>/JLP/JCXB12/HiAJBXD8/TyJBXD19/TyJCXB6/ByJCXB3/ByJBXH9/TyJAXB23/PgnJLG/JBXD29-Tlr4<lps-2J>/JBXD33/TyJBXD32/TyJBXD12/TyJSM/JC57L/JAXB10/PgnJA/JBXA1/PgnJAKR/JBXD9/TyJCE/JBXH7/TyJBXD28/TyJBXD40/TyJBXD36/TyJBXA25/PgnJBXA13/PgnJAXB5/PgnJ129X1/SvJC3H/HeJAXB19a/PgnJBXD14/TyJPL/JBXD6/TyJNZW/LacJBXA24/PgnJAXB2/PgnJBXA12/PgnJBXA16/PgnJFVB/NJAXB4/PgnJCXB2/ByJAXB24/PgnJC57BL/6JCBA/JBXH20/KccJBXH10/TyJNON/ShiLtJBXD21/TyJBXH8/TyJAXB15/PgnJSWR/JBTBR T<+> Itpr3<tf>/JRIIIS/JBXD42/TyJBXH4/TyJNOD/ShiLtJBXH2/TyJAXB19/PgnJSJL/JBALB/cJBXD38/TyJAXB19b/PgnJCAST/EiJBXH19/TyJBXA8/PgnJBXD2/TyJBXA11/PgnJKK/HlJ (no units) 100,000200,000300,000400,000500,000600,000700,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested105 strains
Mean of the strain means274841   None
Median of the strain means266400   None
SD of the strain means± 98667
Coefficient of variation (CV)0.359
Min–max range of strain means64897   –   764792   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 19 419448513539.034 22076237554.686 2.3947 0.0142
Residuals 32 295000933746.772 9218779179.5866


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 105 (105)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 248776.0 0.0   1   0.0 0.0 248776.0, 248776.0 -0.26
A/J m 266400.0 103945.0   2   73500.0 0.39 192900.0, 339901.0 -0.09
AKR/J m 265708.0 0.0   1   0.0 0.0 265708.0, 265708.0 -0.09
AXB10/PgnJ m 268191.0 0.0   1   0.0 0.0 268191.0, 268191.0 -0.07
AXB12/PgnJ m 339145.0 0.0   1   0.0 0.0 339145.0, 339145.0 0.65
AXB13/PgnJ m 336606.0 0.0   1   0.0 0.0 336606.0, 336606.0 0.63
AXB15/PgnJ m 203431.0 0.0   1   0.0 0.0 203431.0, 203431.0 -0.72
AXB19a/PgnJ m 248234.0 0.0   1   0.0 0.0 248234.0, 248234.0 -0.27
AXB19b/PgnJ m 136259.0 0.0   1   0.0 0.0 136259.0, 136259.0 -1.4
AXB19/PgnJ m 173126.0 0.0   1   0.0 0.0 173126.0, 173126.0 -1.03
AXB1/PgnJ m 295834.0 0.0   1   0.0 0.0 295834.0, 295834.0 0.21
AXB23/PgnJ m 274403.0 0.0   1   0.0 0.0 274403.0, 274403.0 0.0
AXB24/PgnJ m 218291.0 72216.0   2   51064.0 0.331 167227.0, 269355.0 -0.57
AXB2/PgnJ m 235993.0 0.0   1   0.0 0.0 235993.0, 235993.0 -0.39
AXB4/PgnJ m 229533.0 0.0   1   0.0 0.0 229533.0, 229533.0 -0.46
AXB5/PgnJ m 249801.0 0.0   1   0.0 0.0 249801.0, 249801.0 -0.25
AXB6/PgnJ m 295082.0 0.0   1   0.0 0.0 295082.0, 295082.0 0.21
AXB8/PgnJ m 318742.0 0.0   1   0.0 0.0 318742.0, 318742.0 0.44
BALB/cJ m 160673.0 38314.0   3 22121.0 0.238 118301.0, 192879.0 -1.16
BTBR T+ Itpr3tf/J m 196436.0 0.0   1   0.0 0.0 196436.0, 196436.0 -0.79
BUB/BnJ m 326167.0 0.0   1   0.0 0.0 326167.0, 326167.0 0.52
BXA11/PgnJ m 84872.0 0.0   1   0.0 0.0 84872.0, 84872.0 -1.93
BXA12/PgnJ m 234780.0 0.0   1   0.0 0.0 234780.0, 234780.0 -0.41
BXA13/PgnJ m 252065.0 0.0   1   0.0 0.0 252065.0, 252065.0 -0.23
BXA14/PgnJ m 298368.0 0.0   1   0.0 0.0 298368.0, 298368.0 0.24
BXA16/PgnJ m 233251.0 27747.0   2   19620.0 0.119 213631.0, 252871.0 -0.42
BXA1/PgnJ m 265845.0 0.0   1   0.0 0.0 265845.0, 265845.0 -0.09
BXA24/PgnJ m 239965.0 0.0   1   0.0 0.0 239965.0, 239965.0 -0.35
BXA25/PgnJ m 253284.0 0.0   1   0.0 0.0 253284.0, 253284.0 -0.22
BXA26/PgnJ m 388823.0 0.0   1   0.0 0.0 388823.0, 388823.0 1.16
BXA2/PgnJ m 394710.0 0.0   1   0.0 0.0 394710.0, 394710.0 1.21
BXA4/PgnJ m 326116.0 0.0   1   0.0 0.0 326116.0, 326116.0 0.52
BXA7/PgnJ m 314056.0 0.0   1   0.0 0.0 314056.0, 314056.0 0.4
BXA8/PgnJ m 103136.0 0.0   1   0.0 0.0 103136.0, 103136.0 -1.74
BXD11/TyJ m 307317.0 0.0   1   0.0 0.0 307317.0, 307317.0 0.33
BXD12/TyJ m 271364.0 0.0   1   0.0 0.0 271364.0, 271364.0 -0.04
BXD13/TyJ m 333690.0 0.0   1   0.0 0.0 333690.0, 333690.0 0.6
BXD14/TyJ m 245044.0 0.0   1   0.0 0.0 245044.0, 245044.0 -0.3
BXD15/TyJ m 392253.0 0.0   1   0.0 0.0 392253.0, 392253.0 1.19
BXD19/TyJ m 282536.0 99069.0   2   70052.0 0.351 212484.0, 352589.0 0.08
BXD1/TyJ m 350824.0 0.0   1   0.0 0.0 350824.0, 350824.0 0.77
BXD20/TyJ m 567940.0 0.0   1   0.0 0.0 567940.0, 567940.0 2.97
BXD21/TyJ m 206458.0 0.0   1   0.0 0.0 206458.0, 206458.0 -0.69
BXD22/TyJ m 352215.0 0.0   1   0.0 0.0 352215.0, 352215.0 0.78
BXD24/TyJ m 353161.0 0.0   1   0.0 0.0 353161.0, 353161.0 0.79
BXD24/TyJ-Cep290rd16/J m 292647.0 0.0   1   0.0 0.0 292647.0, 292647.0 0.18
BXD28/TyJ m 262360.0 6587.0   2   4658.0 0.0251 257702.0, 267018.0 -0.13
BXD29-Tlr4lps-2J/J m 272288.0 0.0   1   0.0 0.0 272288.0, 272288.0 -0.03
BXD2/TyJ m 100691.0 0.0   1   0.0 0.0 100691.0, 100691.0 -1.77
BXD32/TyJ m 271486.0 0.0   1   0.0 0.0 271486.0, 271486.0 -0.03
BXD33/TyJ m 271500.0 0.0   1   0.0 0.0 271500.0, 271500.0 -0.03
BXD34/TyJ m 390787.0 0.0   1   0.0 0.0 390787.0, 390787.0 1.18
BXD36/TyJ m 255557.0 0.0   1   0.0 0.0 255557.0, 255557.0 -0.2
BXD38/TyJ m 142890.0 0.0   1   0.0 0.0 142890.0, 142890.0 -1.34
BXD39/TyJ m 364814.0 0.0   1   0.0 0.0 364814.0, 364814.0 0.91
BXD40/TyJ m 261544.0 0.0   1   0.0 0.0 261544.0, 261544.0 -0.13
BXD42/TyJ m 194321.0 0.0   1   0.0 0.0 194321.0, 194321.0 -0.82
BXD5/TyJ m 328718.0 0.0   1   0.0 0.0 328718.0, 328718.0 0.55
BXD6/TyJ m 243182.0 0.0   1   0.0 0.0 243182.0, 243182.0 -0.32
BXD8/TyJ m 282729.0 0.0   1   0.0 0.0 282729.0, 282729.0 0.08
BXD9/TyJ m 264589.0 0.0   1   0.0 0.0 264589.0, 264589.0 -0.1
BXH10/TyJ m 209854.0 0.0   1   0.0 0.0 209854.0, 209854.0 -0.66
BXH19/TyJ m 107879.0 0.0   1   0.0 0.0 107879.0, 107879.0 -1.69
BXH20/KccJ m 212475.0 0.0   1   0.0 0.0 212475.0, 212475.0 -0.63
BXH22/KccJ m 328399.0 0.0   1   0.0 0.0 328399.0, 328399.0 0.54
BXH2/TyJ m 180777.0 0.0   1   0.0 0.0 180777.0, 180777.0 -0.95
BXH4/TyJ m 191661.0 0.0   1   0.0 0.0 191661.0, 191661.0 -0.84
BXH6/TyJ m 344060.0 0.0   1   0.0 0.0 344060.0, 344060.0 0.7
BXH7/TyJ m 262536.0 0.0   1   0.0 0.0 262536.0, 262536.0 -0.12
BXH8/TyJ m 206210.0 0.0   1   0.0 0.0 206210.0, 206210.0 -0.7
BXH9/TyJ m 274515.0 0.0   1   0.0 0.0 274515.0, 274515.0 0.0
C3H/HeJ m 248244.0 15461.0   2   10932.0 0.0623 237312.0, 259176.0 -0.27
C57BL/6J m 212623.0 37960.0   5 16976.0 0.179 157306.0, 260192.0 -0.63
C57L/J m 268462.0 0.0   1   0.0 0.0 268462.0, 268462.0 -0.06
C58/J m 552890.0 0.0   1   0.0 0.0 552890.0, 552890.0 2.82
CAST/EiJ m 134987.0 0.0   1   0.0 0.0 134987.0, 134987.0 -1.42
CBA/J m 212532.0 0.0   1   0.0 0.0 212532.0, 212532.0 -0.63
CE/J m 262753.0 0.0   1   0.0 0.0 262753.0, 262753.0 -0.12
CXB11/HiAJ m 340780.0 23650.0   2   16723.0 0.0694 324056.0, 357503.0 0.67
CXB12/HiAJ m 290326.0 36268.0   2   25645.0 0.125 264681.0, 315971.0 0.16
CXB13/HiAJ m 498641.0 195010.0   3 112589.0 0.391 348412.0, 719022.0 2.27
CXB1/ByJ m 334007.0 102574.0   3 59221.0 0.307 216760.0, 407164.0 0.6
CXB2/ByJ m 223533.0 88401.0   3 51038.0 0.395 121487.0, 276702.0 -0.52
CXB3/ByJ m 276838.0 2415.0   2   1708.0 0.00872 275130.0, 278545.0 0.02
CXB4/ByJ m 361949.0 10373.0   2   7335.0 0.0287 354614.0, 369284.0 0.88
CXB6/ByJ m 281654.0 75550.0   3 43619.0 0.268 229929.0, 368354.0 0.07
CXB7/ByJ m 314421.0 49387.0   2   34922.0 0.157 279499.0, 349343.0 0.4
CXB8/HiAJ m 348207.0 39899.0   3 23036.0 0.115 307498.0, 387244.0 0.74
CXB9/HiAJ m 340993.0 115009.0   3 66400.0 0.337 260646.0, 472737.0 0.67
DBA/2J m 476724.0 183670.0   4 91835.0 0.385 258469.0, 674234.0 2.05
FVB/NJ m 231207.0 0.0   1   0.0 0.0 231207.0, 231207.0 -0.44
I/LnJ m 764792.0 0.0   1   0.0 0.0 764792.0, 764792.0 4.97
KK/HlJ m 64897.0 0.0   1   0.0 0.0 64897.0, 64897.0 -2.13
LG/J m 274398.0 0.0   1   0.0 0.0 274398.0, 274398.0 0.0
LP/J m 291561.0 0.0   1   0.0 0.0 291561.0, 291561.0 0.17
MA/MyJ m 354825.0 0.0   1   0.0 0.0 354825.0, 354825.0 0.81
NOD/ShiLtJ m 182880.0 0.0   1   0.0 0.0 182880.0, 182880.0 -0.93
NON/ShiLtJ m 207622.0 0.0   1   0.0 0.0 207622.0, 207622.0 -0.68
NZW/LacJ m 242048.0 0.0   1   0.0 0.0 242048.0, 242048.0 -0.33
PL/J m 244322.0 0.0   1   0.0 0.0 244322.0, 244322.0 -0.31
RIIIS/J m 196089.0 0.0   1   0.0 0.0 196089.0, 196089.0 -0.8
SEA/GnJ m 329286.0 0.0   1   0.0 0.0 329286.0, 329286.0 0.55
SJL/J m 167652.0 0.0   1   0.0 0.0 167652.0, 167652.0 -1.09
SM/J m 269447.0 0.0   1   0.0 0.0 269447.0, 269447.0 -0.05
SWR/J m 199345.0 0.0   1   0.0 0.0 199345.0, 199345.0 -0.77


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 266400.3 67892.4855 404692.7675 128107.8325
AXB24/PgnJ m 218291.15 67892.4855 356583.6175 79998.6825
BALB/cJ m 160672.6 55433.9823 273587.9269 47757.2731
BXA16/PgnJ m 233250.85 67892.4855 371543.3175 94958.3825
BXD19/TyJ m 282536.5 67892.4855 420828.9675 144244.0325
BXD28/TyJ m 262360.05 67892.4855 400652.5175 124067.5825
C3H/HeJ m 248243.85 67892.4855 386536.3175 109951.3825
C57BL/6J m 212622.9 42938.978 300086.7361 125159.0639
CXB11/HiAJ m 340779.5 67892.4855 479071.9675 202487.0325
CXB12/HiAJ m 290325.9 67892.4855 428618.3675 152033.4325
CXB13/HiAJ m 498640.9333 55433.9823 611556.2602 385725.6064
CXB1/ByJ m 334006.9333 55433.9823 446922.2602 221091.6064
CXB2/ByJ m 223533.1667 55433.9823 336448.4936 110617.8398
CXB3/ByJ m 276837.5 67892.4855 415129.9675 138545.0325
CXB4/ByJ m 361948.95 67892.4855 500241.4175 223656.4825
CXB6/ByJ m 281654.4667 55433.9823 394569.7936 168739.1398
CXB7/ByJ m 314420.7 67892.4855 452713.1675 176128.2325
CXB8/HiAJ m 348207.1333 55433.9823 461122.4602 235291.8064
CXB9/HiAJ m 340992.6333 55433.9823 453907.9602 228077.3064
DBA/2J m 476724.175 48007.2369 574511.7166 378936.6334




  GWAS USING LINEAR MIXED MODELS

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