Phenotype measure:   HMDPpheno7   maltotetraose

ID, description, units MPD:50208   maltotetraose   liver maltotetraose (16h fast), relative abundance  
Data set, strains HMDPpheno7   HMDP   100 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno7 - liver maltotetraose (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested100 strains
Mean of the strain means198855   None
Median of the strain means114575   None
SD of the strain means± 471510
Coefficient of variation (CV)2.37
Min–max range of strain means6215   –   4480274   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 3162047614149.26 150573695911.87 1.4841 0.1511
Residuals 33 3348129099040.7 101458457546.688


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 63620.0 0.0   1   0.0 0.0 63620.0, 63620.0 -0.29
A/J m 122120.0 5919.0   2   4185.0 0.0485 117934.0, 126305.0 -0.16
AKR/J m 176952.0 0.0   1   0.0 0.0 176952.0, 176952.0 -0.05
AXB10/PgnJ m 114902.0 0.0   1   0.0 0.0 114902.0, 114902.0 -0.18
AXB12/PgnJ m 169410.0 0.0   1   0.0 0.0 169410.0, 169410.0 -0.06
AXB13/PgnJ m 118852.0 0.0   1   0.0 0.0 118852.0, 118852.0 -0.17
AXB15/PgnJ m 69461.0 0.0   1   0.0 0.0 69461.0, 69461.0 -0.27
AXB19a/PgnJ m 138240.0 0.0   1   0.0 0.0 138240.0, 138240.0 -0.13
AXB19b/PgnJ m 134084.0 32818.0   2   23206.0 0.245 110878.0, 157290.0 -0.14
AXB19/PgnJ m 220439.0 0.0   1   0.0 0.0 220439.0, 220439.0 0.05
AXB1/PgnJ m 6215.0 0.0   1   0.0 0.0 6215.0, 6215.0 -0.41
AXB23/PgnJ m 110878.0 0.0   1   0.0 0.0 110878.0, 110878.0 -0.19
AXB24/PgnJ m 1294481.0 1790777.0   2   1266271.0 1.38 28210.0, 2560752.0 2.32
AXB4/PgnJ m 88066.0 0.0   1   0.0 0.0 88066.0, 88066.0 -0.23
AXB5/PgnJ m 175507.0 0.0   1   0.0 0.0 175507.0, 175507.0 -0.05
AXB6/PgnJ m 134786.0 0.0   1   0.0 0.0 134786.0, 134786.0 -0.14
AXB8/PgnJ m 27930.0 0.0   1   0.0 0.0 27930.0, 27930.0 -0.36
BALB/cJ m 74204.0 50592.0   3 29209.0 0.682 16197.0, 109200.0 -0.26
BTBR T+ Itpr3tf/J m 187948.0 0.0   1   0.0 0.0 187948.0, 187948.0 -0.02
BUB/BnJ m 23857.0 0.0   1   0.0 0.0 23857.0, 23857.0 -0.37
BXA11/PgnJ m 85796.0 0.0   1   0.0 0.0 85796.0, 85796.0 -0.24
BXA13/PgnJ m 43612.0 0.0   1   0.0 0.0 43612.0, 43612.0 -0.33
BXA14/PgnJ m 4480274.0 0.0   1   0.0 0.0 4480274.0, 4480274.0 9.08
BXA16/PgnJ m 128992.0 43157.0   2   30516.0 0.335 98476.0, 159508.0 -0.15
BXA1/PgnJ m 133174.0 0.0   1   0.0 0.0 133174.0, 133174.0 -0.14
BXA24/PgnJ m 113026.0 0.0   1   0.0 0.0 113026.0, 113026.0 -0.18
BXA25/PgnJ m 75484.0 0.0   1   0.0 0.0 75484.0, 75484.0 -0.26
BXA26/PgnJ m 79520.0 0.0   1   0.0 0.0 79520.0, 79520.0 -0.25
BXA2/PgnJ m 422313.0 0.0   1   0.0 0.0 422313.0, 422313.0 0.47
BXA4/PgnJ m 25024.0 0.0   1   0.0 0.0 25024.0, 25024.0 -0.37
BXA7/PgnJ m 92749.0 0.0   1   0.0 0.0 92749.0, 92749.0 -0.23
BXA8/PgnJ m 89072.0 0.0   1   0.0 0.0 89072.0, 89072.0 -0.23
BXD11/TyJ m 12415.0 0.0   1   0.0 0.0 12415.0, 12415.0 -0.4
BXD12/TyJ m 52336.0 0.0   1   0.0 0.0 52336.0, 52336.0 -0.31
BXD13/TyJ m 162537.0 0.0   1   0.0 0.0 162537.0, 162537.0 -0.08
BXD14/TyJ m 141661.0 0.0   1   0.0 0.0 141661.0, 141661.0 -0.12
BXD15/TyJ m 121269.0 0.0   1   0.0 0.0 121269.0, 121269.0 -0.16
BXD18/TyJ m 81513.0 0.0   1   0.0 0.0 81513.0, 81513.0 -0.25
BXD19/TyJ m 101788.0 31195.0   2   22058.0 0.306 79730.0, 123846.0 -0.21
BXD1/TyJ m 232036.0 0.0   1   0.0 0.0 232036.0, 232036.0 0.07
BXD20/TyJ m 1146360.0 0.0   1   0.0 0.0 1146360.0, 1146360.0 2.01
BXD21/TyJ m 139914.0 0.0   1   0.0 0.0 139914.0, 139914.0 -0.13
BXD22/TyJ m 612033.0 0.0   1   0.0 0.0 612033.0, 612033.0 0.88
BXD24/TyJ m 17587.0 0.0   1   0.0 0.0 17587.0, 17587.0 -0.38
BXD24/TyJ-Cep290rd16/J m 76516.0 0.0   1   0.0 0.0 76516.0, 76516.0 -0.26
BXD28/TyJ m 324283.0 221114.0   2   156351.0 0.682 167932.0, 480635.0 0.27
BXD29-Tlr4lps-2J/J m 41026.0 0.0   1   0.0 0.0 41026.0, 41026.0 -0.33
BXD2/TyJ m 110670.0 0.0   1   0.0 0.0 110670.0, 110670.0 -0.19
BXD32/TyJ m 73152.0 0.0   1   0.0 0.0 73152.0, 73152.0 -0.27
BXD33/TyJ m 64113.0 0.0   1   0.0 0.0 64113.0, 64113.0 -0.29
BXD34/TyJ m 17385.0 0.0   1   0.0 0.0 17385.0, 17385.0 -0.38
BXD36/TyJ m 93092.0 0.0   1   0.0 0.0 93092.0, 93092.0 -0.22
BXD39/TyJ m 225418.0 0.0   1   0.0 0.0 225418.0, 225418.0 0.06
BXD40/TyJ m 30682.0 0.0   1   0.0 0.0 30682.0, 30682.0 -0.36
BXD42/TyJ m 205099.0 0.0   1   0.0 0.0 205099.0, 205099.0 0.01
BXD5/TyJ m 128352.0 0.0   1   0.0 0.0 128352.0, 128352.0 -0.15
BXD6/TyJ m 254901.0 0.0   1   0.0 0.0 254901.0, 254901.0 0.12
BXD8/TyJ m 94529.0 0.0   1   0.0 0.0 94529.0, 94529.0 -0.22
BXD9/TyJ m 145158.0 0.0   1   0.0 0.0 145158.0, 145158.0 -0.11
BXH10/TyJ m 65180.0 0.0   1   0.0 0.0 65180.0, 65180.0 -0.28
BXH19/TyJ m 385631.0 0.0   1   0.0 0.0 385631.0, 385631.0 0.4
BXH20/KccJ m 190004.0 0.0   1   0.0 0.0 190004.0, 190004.0 -0.02
BXH22/KccJ m 89353.0 0.0   1   0.0 0.0 89353.0, 89353.0 -0.23
BXH2/TyJ m 322845.0 0.0   1   0.0 0.0 322845.0, 322845.0 0.26
BXH4/TyJ m 491833.0 192817.0   2   136342.0 0.392 355491.0, 628175.0 0.62
BXH6/TyJ m 337736.0 0.0   1   0.0 0.0 337736.0, 337736.0 0.29
BXH7/TyJ m 123805.0 0.0   1   0.0 0.0 123805.0, 123805.0 -0.16
BXH8/TyJ m 358296.0 0.0   1   0.0 0.0 358296.0, 358296.0 0.34
BXH9/TyJ m 135115.0 0.0   1   0.0 0.0 135115.0, 135115.0 -0.14
C3H/HeJ m 53599.0 33455.0   2   23656.0 0.624 29943.0, 77255.0 -0.31
C57BL/6J m 46866.0 45343.0   5 20278.0 0.968 9588.0, 109724.0 -0.32
C58/J m 172163.0 0.0   1   0.0 0.0 172163.0, 172163.0 -0.06
CAST/EiJ m 116935.0 0.0   1   0.0 0.0 116935.0, 116935.0 -0.17
CBA/J m 138631.0 0.0   1   0.0 0.0 138631.0, 138631.0 -0.13
CE/J m 21129.0 0.0   1   0.0 0.0 21129.0, 21129.0 -0.38
CXB11/HiAJ m 35605.0 17640.0   2   12474.0 0.495 23131.0, 48079.0 -0.35
CXB12/HiAJ m 120965.0 13984.0   2   9888.0 0.116 111077.0, 130854.0 -0.17
CXB13/HiAJ m 130708.0 27748.0   2   19621.0 0.212 111087.0, 150329.0 -0.14
CXB1/ByJ m 89606.0 29177.0   3 16846.0 0.326 55918.0, 106855.0 -0.23
CXB2/ByJ m 52751.0 60410.0   3 34878.0 1.15 6919.0, 121207.0 -0.31
CXB3/ByJ m 109973.0 14498.0   2   10252.0 0.132 99721.0, 120224.0 -0.19
CXB4/ByJ m 272501.0 40995.0   2   28988.0 0.15 243514.0, 301489.0 0.16
CXB6/ByJ m 40909.0 56647.0   3 32705.0 1.38 6517.0, 106291.0 -0.33
CXB7/ByJ m 189242.0 20868.0   2   14756.0 0.11 174487.0, 203998.0 -0.02
CXB8/HiAJ m 138638.0 31756.0   3 18334.0 0.229 108570.0, 171848.0 -0.13
CXB9/HiAJ m 109219.0 77380.0   3 44676.0 0.708 53992.0, 197662.0 -0.19
DBA/2J m 81057.0 35363.0   4 17681.0 0.436 41791.0, 111036.0 -0.25
I/LnJ m 114248.0 0.0   1   0.0 0.0 114248.0, 114248.0 -0.18
KK/HlJ m 20673.0 0.0   1   0.0 0.0 20673.0, 20673.0 -0.38
LG/J m 149665.0 0.0   1   0.0 0.0 149665.0, 149665.0 -0.1
LP/J m 196619.0 0.0   1   0.0 0.0 196619.0, 196619.0 0.0
MA/MyJ m 18452.0 0.0   1   0.0 0.0 18452.0, 18452.0 -0.38
NOD/ShiLtJ m 16070.0 0.0   1   0.0 0.0 16070.0, 16070.0 -0.39
NON/ShiLtJ m 30084.0 0.0   1   0.0 0.0 30084.0, 30084.0 -0.36
NZW/LacJ m 222041.0 0.0   1   0.0 0.0 222041.0, 222041.0 0.05
PL/J m 46567.0 0.0   1   0.0 0.0 46567.0, 46567.0 -0.32
RIIIS/J m 129520.0 0.0   1   0.0 0.0 129520.0, 129520.0 -0.15
SEA/GnJ m 88820.0 0.0   1   0.0 0.0 88820.0, 88820.0 -0.23
SJL/J m 451427.0 0.0   1   0.0 0.0 451427.0, 451427.0 0.54
SWR/J m 54244.0 0.0   1   0.0 0.0 54244.0, 54244.0 -0.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 122119.75 225231.5004 580356.683 0.0
AXB19b/PgnJ m 134084.05 225231.5004 592320.983 0.0
AXB24/PgnJ m 1294481.05 225231.5004 1752717.983 836244.117
BALB/cJ m 74204.2667 183900.75 448353.1557 0.0
BXA16/PgnJ m 128991.9 225231.5004 587228.833 0.0
BXD19/TyJ m 101788.1 225231.5004 560025.033 0.0
BXD28/TyJ m 324283.35 225231.5004 782520.283 0.0
BXH4/TyJ m 491832.8 225231.5004 950069.733 33595.867
C3H/HeJ m 53599.15 225231.5004 511836.083 0.0
C57BL/6J m 46865.54 142448.9084 336680.0233 0.0
CXB11/HiAJ m 35605.0 225231.5004 493841.933 0.0
CXB12/HiAJ m 120965.4 225231.5004 579202.333 0.0
CXB13/HiAJ m 130707.85 225231.5004 588944.783 0.0
CXB1/ByJ m 89606.3 183900.75 463755.1891 0.0
CXB2/ByJ m 52750.8333 183900.75 426899.7224 0.0
CXB3/ByJ m 109972.55 225231.5004 568209.483 0.0
CXB4/ByJ m 272501.25 225231.5004 730738.183 0.0
CXB6/ByJ m 40909.2667 183900.75 415058.1557 0.0
CXB7/ByJ m 189242.4 225231.5004 647479.333 0.0
CXB8/HiAJ m 138637.7 183900.75 512786.5891 0.0
CXB9/HiAJ m 109218.9 183900.75 483367.7891 0.0
DBA/2J m 81056.6 159262.7213 405079.0427 0.0




  GWAS USING LINEAR MIXED MODELS