Project measure / variable:   HMDPpheno7   maltose

ID, description, units MPD:50205   maltose   liver maltose (16h fast), relative abundance    
Data set, strains HMDPpheno7   HMDP   94 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno7 - liver maltose (16h fast), relative abundance

BXA2/PgnJBXH6/TyJBXH4/TyJAXB24/PgnJBXD28/TyJBXD22/TyJBXH8/TyJSJL/JBXD39/TyJNZW/LacJBXH19/TyJBXA14/PgnJCXB4/ByJCXB2/ByJBXD6/TyJCXB7/ByJBXD42/TyJBXD1/TyJBXD20/TyJAXB19a/PgnJBTBR T<+> Itpr3<tf>/JAXB5/PgnJBXH2/TyJBXA16/PgnJAXB19/PgnJBXH20/KccJBXA7/PgnJC58/JBXH7/TyJBXD5/TyJBXD13/TyJCXB13/HiAJCXB6/ByJCXB8/HiAJBXD14/TyJBXA1/PgnJCXB3/ByJCXB1/ByJBXD9/TyJAXB6/PgnJLP/JAXB19b/PgnJBXA24/PgnJBXD8/TyJBXD19/TyJBXD15/TyJAXB12/PgnJAXB10/PgnJCXB12/HiAJBXD2/TyJAXB23/PgnJBXD21/TyJBXD32/TyJAKR/JBXH9/TyJI/LnJBXA8/PgnJCBA/JDBA/2JBXA26/PgnJLG/JBALB/cJAXB4/PgnJCXB9/HiAJBXD18/TyJRIIIS/JAXB13/PgnJBXA25/PgnJA/JBXD36/TyJBXA11/PgnJBXD24/TyJ-Cep290<rd16>/JBXD33/TyJC57BL/6JBXH22/KccJSEA/GnJCAST/EiJBXD29-Tlr4<lps-2J>/JKK/HlJBXD24/TyJCXB11/HiAJBXA4/PgnJAXB8/PgnJAXB15/PgnJPL/JC3H/HeJBXH10/TyJSWR/JBXD40/TyJBXA13/PgnJCE/J129X1/SvJBXD12/TyJAXB1/PgnJ (no units) 050,000,000100,000,000150,000,000200,000,000250,000,000300,000,000350,000,000400,000,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested94 strains
Mean of the strain means25746800   None
Median of the strain means6103860   None
SD of the strain means± 53081436
Coefficient of variation (CV)2.06
Min–max range of strain means16332   –   296785440   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 20 1.85496609790936e+17 9274830489546790.0 1.8869 0.0581
Residuals 29 1.42547569877264e+17 4915433444043590.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 94 (94)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 95957.0 0.0   1   0.0 0.0 95957.0, 95957.0 -0.48
A/J m 1700050.0 1973283.0   2   1395322.0 1.16 304728.0, 3095372.0 -0.45
AKR/J m 4293880.0 0.0   1   0.0 0.0 4293880.0, 4293880.0 -0.4
AXB10/PgnJ m 5951226.0 0.0   1   0.0 0.0 5951226.0, 5951226.0 -0.37
AXB12/PgnJ m 6256494.0 0.0   1   0.0 0.0 6256494.0, 6256494.0 -0.37
AXB13/PgnJ m 1713652.0 0.0   1   0.0 0.0 1713652.0, 1713652.0 -0.45
AXB15/PgnJ m 142287.0 0.0   1   0.0 0.0 142287.0, 142287.0 -0.48
AXB19a/PgnJ m 32966176.0 0.0   1   0.0 0.0 32966176.0, 32966176.0 0.14
AXB19b/PgnJ m 10296857.0 10733444.0   2   7589691.0 1.04 2707165.0, 17886548.0 -0.29
AXB19/PgnJ m 23882004.0 0.0   1   0.0 0.0 23882004.0, 23882004.0 -0.04
AXB1/PgnJ m 16332.0 0.0   1   0.0 0.0 16332.0, 16332.0 -0.48
AXB23/PgnJ m 5122553.0 0.0   1   0.0 0.0 5122553.0, 5122553.0 -0.39
AXB24/PgnJ m 212806695.0 300481815.0   2   212472729.0 1.41 333966.0, 425279424.0 3.52
AXB4/PgnJ m 2083703.0 0.0   1   0.0 0.0 2083703.0, 2083703.0 -0.45
AXB5/PgnJ m 28681860.0 0.0   1   0.0 0.0 28681860.0, 28681860.0 0.06
AXB6/PgnJ m 10796549.0 0.0   1   0.0 0.0 10796549.0, 10796549.0 -0.28
AXB8/PgnJ m 145787.0 0.0   1   0.0 0.0 145787.0, 145787.0 -0.48
BALB/cJ m 2170840.0 2018863.0   3 1165591.0 0.93 23155.0, 4029790.0 -0.44
BTBR T+ Itpr3tf/J m 32372866.0 0.0   1   0.0 0.0 32372866.0, 32372866.0 0.12
BXA11/PgnJ m 1416884.0 0.0   1   0.0 0.0 1416884.0, 1416884.0 -0.46
BXA13/PgnJ m 113908.0 0.0   1   0.0 0.0 113908.0, 113908.0 -0.48
BXA14/PgnJ m 46703476.0 0.0   1   0.0 0.0 46703476.0, 46703476.0 0.39
BXA16/PgnJ m 28283784.0 32754928.0   2   23161232.0 1.16 5122553.0, 51445016.0 0.05
BXA1/PgnJ m 12408511.0 0.0   1   0.0 0.0 12408511.0, 12408511.0 -0.25
BXA24/PgnJ m 9874612.0 0.0   1   0.0 0.0 9874612.0, 9874612.0 -0.3
BXA25/PgnJ m 1709448.0 0.0   1   0.0 0.0 1709448.0, 1709448.0 -0.45
BXA26/PgnJ m 2695236.0 0.0   1   0.0 0.0 2695236.0, 2695236.0 -0.43
BXA2/PgnJ m 296785440.0 0.0   1   0.0 0.0 296785440.0, 296785440.0 5.11
BXA4/PgnJ m 168076.0 0.0   1   0.0 0.0 168076.0, 168076.0 -0.48
BXA7/PgnJ m 21812064.0 0.0   1   0.0 0.0 21812064.0, 21812064.0 -0.07
BXA8/PgnJ m 3455929.0 0.0   1   0.0 0.0 3455929.0, 3455929.0 -0.42
BXD12/TyJ m 72522.0 0.0   1   0.0 0.0 72522.0, 72522.0 -0.48
BXD13/TyJ m 17200562.0 0.0   1   0.0 0.0 17200562.0, 17200562.0 -0.16
BXD14/TyJ m 12869690.0 0.0   1   0.0 0.0 12869690.0, 12869690.0 -0.24
BXD15/TyJ m 7928218.0 0.0   1   0.0 0.0 7928218.0, 7928218.0 -0.34
BXD18/TyJ m 1771842.0 0.0   1   0.0 0.0 1771842.0, 1771842.0 -0.45
BXD19/TyJ m 8803559.0 2566529.0   2   1814810.0 0.292 6988749.0, 10618369.0 -0.32
BXD1/TyJ m 35298272.0 0.0   1   0.0 0.0 35298272.0, 35298272.0 0.18
BXD20/TyJ m 34617640.0 0.0   1   0.0 0.0 34617640.0, 34617640.0 0.17
BXD21/TyJ m 5122553.0 0.0   1   0.0 0.0 5122553.0, 5122553.0 -0.39
BXD22/TyJ m 130139144.0 0.0   1   0.0 0.0 130139144.0, 130139144.0 1.97
BXD24/TyJ m 233207.0 0.0   1   0.0 0.0 233207.0, 233207.0 -0.48
BXD24/TyJ-Cep290rd16/J m 1295971.0 0.0   1   0.0 0.0 1295971.0, 1295971.0 -0.46
BXD28/TyJ m 150274790.0 203660004.0   2   144009370.0 1.36 6265420.0, 294284160.0 2.35
BXD29-Tlr4lps-2J/J m 468561.0 0.0   1   0.0 0.0 468561.0, 468561.0 -0.48
BXD2/TyJ m 5571144.0 0.0   1   0.0 0.0 5571144.0, 5571144.0 -0.38
BXD32/TyJ m 4765532.0 0.0   1   0.0 0.0 4765532.0, 4765532.0 -0.4
BXD33/TyJ m 1246752.0 0.0   1   0.0 0.0 1246752.0, 1246752.0 -0.46
BXD36/TyJ m 1568650.0 0.0   1   0.0 0.0 1568650.0, 1568650.0 -0.46
BXD39/TyJ m 57948304.0 0.0   1   0.0 0.0 57948304.0, 57948304.0 0.61
BXD40/TyJ m 117298.0 0.0   1   0.0 0.0 117298.0, 117298.0 -0.48
BXD42/TyJ m 35622520.0 0.0   1   0.0 0.0 35622520.0, 35622520.0 0.19
BXD5/TyJ m 17330520.0 0.0   1   0.0 0.0 17330520.0, 17330520.0 -0.16
BXD6/TyJ m 40032004.0 0.0   1   0.0 0.0 40032004.0, 40032004.0 0.27
BXD8/TyJ m 9391185.0 0.0   1   0.0 0.0 9391185.0, 9391185.0 -0.31
BXD9/TyJ m 11495056.0 0.0   1   0.0 0.0 11495056.0, 11495056.0 -0.27
BXH10/TyJ m 129105.0 0.0   1   0.0 0.0 129105.0, 129105.0 -0.48
BXH19/TyJ m 48609856.0 0.0   1   0.0 0.0 48609856.0, 48609856.0 0.43
BXH20/KccJ m 21873622.0 0.0   1   0.0 0.0 21873622.0, 21873622.0 -0.07
BXH22/KccJ m 1043007.0 0.0   1   0.0 0.0 1043007.0, 1043007.0 -0.47
BXH2/TyJ m 28602630.0 0.0   1   0.0 0.0 28602630.0, 28602630.0 0.05
BXH4/TyJ m 214022256.0 67078978.0   2   47432000.0 0.313 166590256.0, 261454256.0 3.55
BXH6/TyJ m 257826704.0 0.0   1   0.0 0.0 257826704.0, 257826704.0 4.37
BXH7/TyJ m 19365386.0 0.0   1   0.0 0.0 19365386.0, 19365386.0 -0.12
BXH8/TyJ m 69778928.0 0.0   1   0.0 0.0 69778928.0, 69778928.0 0.83
BXH9/TyJ m 3836896.0 0.0   1   0.0 0.0 3836896.0, 3836896.0 -0.41
C3H/HeJ m 130571.0 98735.0   2   69816.0 0.756 60754.0, 200387.0 -0.48
C57BL/6J m 1115536.0 1513555.0   4 756778.0 1.36 30289.0, 3302202.0 -0.46
C58/J m 20702158.0 0.0   1   0.0 0.0 20702158.0, 20702158.0 -0.1
CAST/EiJ m 913971.0 0.0   1   0.0 0.0 913971.0, 913971.0 -0.47
CBA/J m 3314909.0 0.0   1   0.0 0.0 3314909.0, 3314909.0 -0.42
CE/J m 112220.0 0.0   1   0.0 0.0 112220.0, 112220.0 -0.48
CXB11/HiAJ m 220724.0 257924.0   2   182380.0 1.17 38344.0, 403104.0 -0.48
CXB12/HiAJ m 5723999.0 7137099.0   2   5046691.0 1.25 677308.0, 10770690.0 -0.38
CXB13/HiAJ m 16306264.0 14309284.0   2   10118192.0 0.878 6188072.0, 26424456.0 -0.18
CXB1/ByJ m 11891323.0 14113196.0   3 8148257.0 1.19 215757.0, 27575078.0 -0.26
CXB2/ByJ m 40867730.0 57707513.0   2   40805374.0 1.41 62357.0, 81673104.0 0.28
CXB3/ByJ m 12180459.0 7325885.0   2   5180183.0 0.601 7000276.0, 17360642.0 -0.26
CXB4/ByJ m 43022767.0 16710100.0   2   11815825.0 0.388 31206942.0, 54838592.0 0.33
CXB6/ByJ m 13355644.0 0.0   1   0.0 0.0 13355644.0, 13355644.0 -0.23
CXB7/ByJ m 36481235.0 17949845.0   2   12692457.0 0.492 23788778.0, 49173692.0 0.2
CXB8/HiAJ m 12990171.0 13960841.0   3 8060295.0 1.07 3537000.0, 29025304.0 -0.24
CXB9/HiAJ m 1965373.0 2669450.0   3 1541208.0 1.36 194949.0, 5035800.0 -0.45
DBA/2J m 2695974.0 2841258.0   4 1420629.0 1.05 85090.0, 5460794.0 -0.43
I/LnJ m 3800495.0 0.0   1   0.0 0.0 3800495.0, 3800495.0 -0.41
KK/HlJ m 283447.0 0.0   1   0.0 0.0 283447.0, 283447.0 -0.48
LG/J m 2591433.0 0.0   1   0.0 0.0 2591433.0, 2591433.0 -0.44
LP/J m 10751313.0 0.0   1   0.0 0.0 10751313.0, 10751313.0 -0.28
NZW/LacJ m 51514704.0 0.0   1   0.0 0.0 51514704.0, 51514704.0 0.49
PL/J m 140131.0 0.0   1   0.0 0.0 140131.0, 140131.0 -0.48
RIIIS/J m 1717056.0 0.0   1   0.0 0.0 1717056.0, 1717056.0 -0.45
SEA/GnJ m 1033525.0 0.0   1   0.0 0.0 1033525.0, 1033525.0 -0.47
SJL/J m 61061604.0 0.0   1   0.0 0.0 61061604.0, 61061604.0 0.67
SWR/J m 117417.0 0.0   1   0.0 0.0 117417.0, 117417.0 -0.48


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1700049.6 49575364.0634 103093053.7021 0.0
AXB19b/PgnJ m 10296856.65 49575364.0634 111689860.7521 0.0
AXB24/PgnJ m 212806694.8 49575364.0634 314199698.9021 111413690.6979
BALB/cJ m 2170840.2667 40478115.256 84957881.446 0.0
BXA16/PgnJ m 28283784.5 49575364.0634 129676788.6021 0.0
BXD19/TyJ m 8803559.0 49575364.0634 110196563.1021 0.0
BXD28/TyJ m 150274790.25 49575364.0634 251667794.3521 48881786.1479
BXH4/TyJ m 214022256.0 49575364.0634 315415260.1021 112629251.8979
C3H/HeJ m 130570.6 49575364.0634 101523574.7021 0.0
C57BL/6J m 1115536.4 35055076.109 72811217.1654 0.0
CXB11/HiAJ m 220724.05 49575364.0634 101613728.1521 0.0
CXB12/HiAJ m 5723999.15 49575364.0634 107117003.2521 0.0
CXB13/HiAJ m 16306264.25 49575364.0634 117699268.3521 0.0
CXB1/ByJ m 11891322.6 40478115.256 94678363.7793 0.0
CXB2/ByJ m 40867730.3 49575364.0634 142260734.4021 0.0
CXB3/ByJ m 12180459.25 49575364.0634 113573463.3521 0.0
CXB4/ByJ m 43022767.0 49575364.0634 144415771.1021 0.0
CXB7/ByJ m 36481235.0 49575364.0634 137874239.1021 0.0
CXB8/HiAJ m 12990171.3333 40478115.256 95777212.5126 0.0
CXB9/HiAJ m 1965373.0 40478115.256 84752414.1793 0.0
DBA/2J m 2695974.5 35055076.109 74391655.2654 0.0




  GWAS USING LINEAR MIXED MODELS

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