Project measure / variable:   HMDPpheno7   fructose

ID, description, units MPD:50204   fructose   liver fructose (16h fast), relative abundance    
Data set, strains HMDPpheno7   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno7 - liver fructose (16h fast), relative abundance

BXA14/PgnJBXD22/TyJBXA2/PgnJBXH4/TyJBTBR T<+> Itpr3<tf>/JBXH8/TyJBXD39/TyJBXH19/TyJAXB24/PgnJAXB19a/PgnJBXH6/TyJBXD1/TyJAXB19/PgnJBXD20/TyJCXB4/ByJC58/JNZW/LacJBXD28/TyJBXD13/TyJBXD5/TyJAXB19b/PgnJBXH2/TyJBXH20/KccJBXA24/PgnJBXD42/TyJBXA7/PgnJBXD9/TyJBXD6/TyJCXB8/HiAJAXB6/PgnJCXB7/ByJBXA1/PgnJAXB4/PgnJBXA16/PgnJLP/JBXH22/KccJBXD21/TyJAXB23/PgnJBXD14/TyJSJL/JA/JCXB3/ByJAXB10/PgnJBXD32/TyJAXB5/PgnJCXB1/ByJC3H/HeJBXH7/TyJAXB15/PgnJBXD2/TyJCBA/JBXD15/TyJBXA11/PgnJBXD19/TyJBXD29-Tlr4<lps-2J>/JAKR/JI/LnJBXD8/TyJBXD33/TyJBXA8/PgnJBXH9/TyJCAST/EiJKK/HlJSWR/JDBA/2JCXB13/HiAJAXB13/PgnJBXA25/PgnJBALB/cJAXB12/PgnJ129X1/SvJBXA26/PgnJC57BL/6JBXD12/TyJLG/JBXD18/TyJAXB8/PgnJBXA13/PgnJCXB12/HiAJCE/JCXB9/HiAJSEA/GnJMA/MyJCXB2/ByJPL/JBXD24/TyJ-Cep290<rd16>/JAXB1/PgnJBXD24/TyJRIIIS/JNOD/ShiLtJFVB/NJBXD36/TyJAXB2/PgnJBXD34/TyJNON/ShiLtJBUB/BnJCXB11/HiAJCXB6/ByJBXA4/PgnJBXH10/TyJBXD40/TyJSM/JBXD11/TyJBXD38/TyJC57L/JBXA12/PgnJ (no units) 500,0001,000,0001,500,0002,000,0002,500,0003,000,0003,500,0004,000,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means1575489   None
Median of the strain means1485589   None
SD of the strain means± 517412
Coefficient of variation (CV)0.328
Min–max range of strain means484072   –   3451557   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 9642889263768.55 459185203036.598 2.015 0.0335
Residuals 34 7748059069566.5 227884090281.368


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 1320732.0 0.0   1   0.0 0.0 1320732.0, 1320732.0 -0.49
A/J m 1584230.0 329237.0   2   232806.0 0.208 1351425.0, 1817036.0 0.02
AKR/J m 1451237.0 0.0   1   0.0 0.0 1451237.0, 1451237.0 -0.24
AXB10/PgnJ m 1575336.0 0.0   1   0.0 0.0 1575336.0, 1575336.0 0.0
AXB12/PgnJ m 1322288.0 0.0   1   0.0 0.0 1322288.0, 1322288.0 -0.49
AXB13/PgnJ m 1358816.0 0.0   1   0.0 0.0 1358816.0, 1358816.0 -0.42
AXB15/PgnJ m 1530332.0 0.0   1   0.0 0.0 1530332.0, 1530332.0 -0.09
AXB19a/PgnJ m 2408636.0 0.0   1   0.0 0.0 2408636.0, 2408636.0 1.61
AXB19b/PgnJ m 1978050.0 65086.0   2   46022.0 0.0329 1932028.0, 2024073.0 0.78
AXB19/PgnJ m 2212124.0 0.0   1   0.0 0.0 2212124.0, 2212124.0 1.23
AXB1/PgnJ m 1173824.0 0.0   1   0.0 0.0 1173824.0, 1173824.0 -0.78
AXB23/PgnJ m 1634939.0 0.0   1   0.0 0.0 1634939.0, 1634939.0 0.11
AXB24/PgnJ m 2446540.0 2012630.0   2   1423144.0 0.823 1023396.0, 3869684.0 1.68
AXB2/PgnJ m 1053037.0 0.0   1   0.0 0.0 1053037.0, 1053037.0 -1.01
AXB4/PgnJ m 1759577.0 0.0   1   0.0 0.0 1759577.0, 1759577.0 0.36
AXB5/PgnJ m 1556241.0 0.0   1   0.0 0.0 1556241.0, 1556241.0 -0.04
AXB6/PgnJ m 1851661.0 0.0   1   0.0 0.0 1851661.0, 1851661.0 0.53
AXB8/PgnJ m 1251336.0 0.0   1   0.0 0.0 1251336.0, 1251336.0 -0.63
BALB/cJ m 1350337.0 374549.0   3 216246.0 0.277 924594.0, 1629122.0 -0.44
BTBR T+ Itpr3tf/J m 2602004.0 0.0   1   0.0 0.0 2602004.0, 2602004.0 1.98
BUB/BnJ m 972360.0 0.0   1   0.0 0.0 972360.0, 972360.0 -1.17
BXA11/PgnJ m 1497640.0 0.0   1   0.0 0.0 1497640.0, 1497640.0 -0.15
BXA12/PgnJ m 484072.0 0.0   1   0.0 0.0 484072.0, 484072.0 -2.11
BXA13/PgnJ m 1236348.0 0.0   1   0.0 0.0 1236348.0, 1236348.0 -0.66
BXA14/PgnJ m 3451557.0 0.0   1   0.0 0.0 3451557.0, 3451557.0 3.63
BXA16/PgnJ m 1722964.0 874096.0   2   618079.0 0.507 1104884.0, 2341043.0 0.29
BXA1/PgnJ m 1767379.0 0.0   1   0.0 0.0 1767379.0, 1767379.0 0.37
BXA24/PgnJ m 1925763.0 0.0   1   0.0 0.0 1925763.0, 1925763.0 0.68
BXA25/PgnJ m 1354684.0 0.0   1   0.0 0.0 1354684.0, 1354684.0 -0.43
BXA26/PgnJ m 1320520.0 0.0   1   0.0 0.0 1320520.0, 1320520.0 -0.49
BXA2/PgnJ m 2746676.0 0.0   1   0.0 0.0 2746676.0, 2746676.0 2.26
BXA4/PgnJ m 956912.0 0.0   1   0.0 0.0 956912.0, 956912.0 -1.2
BXA7/PgnJ m 1879448.0 0.0   1   0.0 0.0 1879448.0, 1879448.0 0.59
BXA8/PgnJ m 1393222.0 0.0   1   0.0 0.0 1393222.0, 1393222.0 -0.35
BXD11/TyJ m 856933.0 0.0   1   0.0 0.0 856933.0, 856933.0 -1.39
BXD12/TyJ m 1304213.0 0.0   1   0.0 0.0 1304213.0, 1304213.0 -0.52
BXD13/TyJ m 1986067.0 0.0   1   0.0 0.0 1986067.0, 1986067.0 0.79
BXD14/TyJ m 1632376.0 0.0   1   0.0 0.0 1632376.0, 1632376.0 0.11
BXD15/TyJ m 1510333.0 0.0   1   0.0 0.0 1510333.0, 1510333.0 -0.13
BXD18/TyJ m 1292573.0 0.0   1   0.0 0.0 1292573.0, 1292573.0 -0.55
BXD19/TyJ m 1473538.0 13302.0   2   9406.0 0.00903 1464132.0, 1482943.0 -0.2
BXD1/TyJ m 2294920.0 0.0   1   0.0 0.0 2294920.0, 2294920.0 1.39
BXD20/TyJ m 2202538.0 0.0   1   0.0 0.0 2202538.0, 2202538.0 1.21
BXD21/TyJ m 1653511.0 0.0   1   0.0 0.0 1653511.0, 1653511.0 0.15
BXD22/TyJ m 2770584.0 0.0   1   0.0 0.0 2770584.0, 2770584.0 2.31
BXD24/TyJ m 1128238.0 0.0   1   0.0 0.0 1128238.0, 1128238.0 -0.86
BXD24/TyJ-Cep290rd16/J m 1173998.0 0.0   1   0.0 0.0 1173998.0, 1173998.0 -0.78
BXD28/TyJ m 2071410.0 786419.0   2   556082.0 0.38 1515328.0, 2627492.0 0.96
BXD29-Tlr4lps-2J/J m 1465934.0 0.0   1   0.0 0.0 1465934.0, 1465934.0 -0.21
BXD2/TyJ m 1524265.0 0.0   1   0.0 0.0 1524265.0, 1524265.0 -0.1
BXD32/TyJ m 1563937.0 0.0   1   0.0 0.0 1563937.0, 1563937.0 -0.02
BXD33/TyJ m 1394362.0 0.0   1   0.0 0.0 1394362.0, 1394362.0 -0.35
BXD34/TyJ m 1046854.0 0.0   1   0.0 0.0 1046854.0, 1046854.0 -1.02
BXD36/TyJ m 1061944.0 0.0   1   0.0 0.0 1061944.0, 1061944.0 -0.99
BXD38/TyJ m 694788.0 0.0   1   0.0 0.0 694788.0, 694788.0 -1.7
BXD39/TyJ m 2513680.0 0.0   1   0.0 0.0 2513680.0, 2513680.0 1.81
BXD40/TyJ m 928034.0 0.0   1   0.0 0.0 928034.0, 928034.0 -1.25
BXD42/TyJ m 1894061.0 0.0   1   0.0 0.0 1894061.0, 1894061.0 0.62
BXD5/TyJ m 1982189.0 0.0   1   0.0 0.0 1982189.0, 1982189.0 0.79
BXD6/TyJ m 1862666.0 0.0   1   0.0 0.0 1862666.0, 1862666.0 0.56
BXD8/TyJ m 1423400.0 0.0   1   0.0 0.0 1423400.0, 1423400.0 -0.29
BXD9/TyJ m 1866011.0 0.0   1   0.0 0.0 1866011.0, 1866011.0 0.56
BXH10/TyJ m 944183.0 0.0   1   0.0 0.0 944183.0, 944183.0 -1.22
BXH19/TyJ m 2493864.0 0.0   1   0.0 0.0 2493864.0, 2493864.0 1.77
BXH20/KccJ m 1946817.0 0.0   1   0.0 0.0 1946817.0, 1946817.0 0.72
BXH22/KccJ m 1654300.0 0.0   1   0.0 0.0 1654300.0, 1654300.0 0.15
BXH2/TyJ m 1955793.0 0.0   1   0.0 0.0 1955793.0, 1955793.0 0.74
BXH4/TyJ m 2662510.0 10132.0   2   7164.0 0.00381 2655346.0, 2669674.0 2.1
BXH6/TyJ m 2390310.0 0.0   1   0.0 0.0 2390310.0, 2390310.0 1.57
BXH7/TyJ m 1539227.0 0.0   1   0.0 0.0 1539227.0, 1539227.0 -0.07
BXH8/TyJ m 2535524.0 0.0   1   0.0 0.0 2535524.0, 2535524.0 1.86
BXH9/TyJ m 1393184.0 0.0   1   0.0 0.0 1393184.0, 1393184.0 -0.35
C3H/HeJ m 1549016.0 90891.0   2   64270.0 0.0587 1484746.0, 1613286.0 -0.05
C57BL/6J m 1306093.0 277062.0   5 123906.0 0.212 972742.0, 1719415.0 -0.52
C57L/J m 692433.0 0.0   1   0.0 0.0 692433.0, 692433.0 -1.71
C58/J m 2190465.0 0.0   1   0.0 0.0 2190465.0, 2190465.0 1.19
CAST/EiJ m 1390729.0 0.0   1   0.0 0.0 1390729.0, 1390729.0 -0.36
CBA/J m 1513938.0 0.0   1   0.0 0.0 1513938.0, 1513938.0 -0.12
CE/J m 1220877.0 0.0   1   0.0 0.0 1220877.0, 1220877.0 -0.69
CXB11/HiAJ m 972035.0 283821.0   2   200692.0 0.292 771343.0, 1172726.0 -1.17
CXB12/HiAJ m 1224910.0 174864.0   2   123648.0 0.143 1101262.0, 1348558.0 -0.68
CXB13/HiAJ m 1361666.0 347852.0   3 200833.0 0.255 1128594.0, 1761502.0 -0.41
CXB1/ByJ m 1556069.0 158256.0   3 91369.0 0.102 1428014.0, 1732997.0 -0.04
CXB2/ByJ m 1176978.0 340689.0   3 196697.0 0.289 882770.0, 1550246.0 -0.77
CXB3/ByJ m 1576108.0 71603.0   2   50631.0 0.0454 1525478.0, 1626740.0 0.0
CXB4/ByJ m 2196577.0 63349.0   2   44794.0 0.0288 2151783.0, 2241372.0 1.2
CXB6/ByJ m 963315.0 353061.0   3 203840.0 0.367 730217.0, 1369520.0 -1.18
CXB7/ByJ m 1801376.0 149118.0   2   105443.0 0.0828 1695933.0, 1906819.0 0.44
CXB8/HiAJ m 1856602.0 300536.0   3 173514.0 0.162 1629266.0, 2197340.0 0.54
CXB9/HiAJ m 1210882.0 258745.0   3 149386.0 0.214 918322.0, 1409651.0 -0.7
DBA/2J m 1368098.0 353787.0   4 176894.0 0.259 964740.0, 1822628.0 -0.4
FVB/NJ m 1075560.0 0.0   1   0.0 0.0 1075560.0, 1075560.0 -0.97
I/LnJ m 1435017.0 0.0   1   0.0 0.0 1435017.0, 1435017.0 -0.27
KK/HlJ m 1376394.0 0.0   1   0.0 0.0 1376394.0, 1376394.0 -0.38
LG/J m 1294188.0 0.0   1   0.0 0.0 1294188.0, 1294188.0 -0.54
LP/J m 1678889.0 0.0   1   0.0 0.0 1678889.0, 1678889.0 0.2
MA/MyJ m 1180494.0 0.0   1   0.0 0.0 1180494.0, 1180494.0 -0.76
NOD/ShiLtJ m 1111171.0 0.0   1   0.0 0.0 1111171.0, 1111171.0 -0.9
NON/ShiLtJ m 1019451.0 0.0   1   0.0 0.0 1019451.0, 1019451.0 -1.07
NZW/LacJ m 2089776.0 0.0   1   0.0 0.0 2089776.0, 2089776.0 0.99
PL/J m 1174214.0 0.0   1   0.0 0.0 1174214.0, 1174214.0 -0.78
RIIIS/J m 1114140.0 0.0   1   0.0 0.0 1114140.0, 1114140.0 -0.89
SEA/GnJ m 1194663.0 0.0   1   0.0 0.0 1194663.0, 1194663.0 -0.74
SJL/J m 1625165.0 0.0   1   0.0 0.0 1625165.0, 1625165.0 0.1
SM/J m 908217.0 0.0   1   0.0 0.0 908217.0, 908217.0 -1.29
SWR/J m 1376388.0 0.0   1   0.0 0.0 1376388.0, 1376388.0 -0.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1584230.25 337553.0257 2270220.533 898239.967
AXB19b/PgnJ m 1978050.3 337553.0257 2664040.583 1292060.017
AXB24/PgnJ m 2446540.15 337553.0257 3132530.433 1760549.867
BALB/cJ m 1350336.6333 275610.8913 1910445.354 790227.9127
BXA16/PgnJ m 1722963.6 337553.0257 2408953.883 1036973.317
BXD19/TyJ m 1473537.65 337553.0257 2159527.933 787547.367
BXD28/TyJ m 2071410.2 337553.0257 2757400.483 1385419.917
BXH4/TyJ m 2662510.05 337553.0257 3348500.333 1976519.767
C3H/HeJ m 1549015.65 337553.0257 2235005.933 863025.367
C57BL/6J m 1306093.14 213487.2784 1739951.4894 872234.7906
CXB11/HiAJ m 972034.85 337553.0257 1658025.133 286044.567
CXB12/HiAJ m 1224909.9 337553.0257 1910900.183 538919.617
CXB13/HiAJ m 1361665.5667 275610.8913 1921774.2873 801556.846
CXB1/ByJ m 1556068.7667 275610.8913 2116177.4873 995960.046
CXB2/ByJ m 1176977.9333 275610.8913 1737086.654 616869.2127
CXB3/ByJ m 1576108.5 337553.0257 2262098.783 890118.217
CXB4/ByJ m 2196577.4 337553.0257 2882567.683 1510587.117
CXB6/ByJ m 963314.6667 275610.8913 1523423.3873 403205.946
CXB7/ByJ m 1801375.95 337553.0257 2487366.233 1115385.667
CXB8/HiAJ m 1856602.1667 275610.8913 2416710.8873 1296493.446
CXB9/HiAJ m 1210882.4667 275610.8913 1770991.1873 650773.746
DBA/2J m 1368097.925 238686.0335 1853166.306 883029.544




  GWAS USING LINEAR MIXED MODELS

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