Phenotype measure:   HMDPpheno7   erythrose

ID, description, units MPD:50203   erythrose   liver erythrose (16h fast), relative abundance  
Data set, strains HMDPpheno7   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno7 - liver erythrose (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means220471   None
Median of the strain means217967   None
SD of the strain means± 81004
Coefficient of variation (CV)0.367
Min–max range of strain means65058   –   478568   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 162598189774.775 7742770941.656 0.7356 0.7683
Residuals 34 357876810611.445 10525788547.3954


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 180272.0 0.0   1   0.0 0.0 180272.0, 180272.0 -0.5
A/J m 253223.0 5700.0   2   4031.0 0.0225 249193.0, 257254.0 0.4
AKR/J m 225583.0 0.0   1   0.0 0.0 225583.0, 225583.0 0.06
AXB10/PgnJ m 219939.0 0.0   1   0.0 0.0 219939.0, 219939.0 -0.01
AXB12/PgnJ m 194326.0 0.0   1   0.0 0.0 194326.0, 194326.0 -0.32
AXB13/PgnJ m 336110.0 0.0   1   0.0 0.0 336110.0, 336110.0 1.43
AXB15/PgnJ m 478568.0 0.0   1   0.0 0.0 478568.0, 478568.0 3.19
AXB19a/PgnJ m 227269.0 0.0   1   0.0 0.0 227269.0, 227269.0 0.08
AXB19b/PgnJ m 233087.0 183523.0   2   129770.0 0.787 103317.0, 362857.0 0.16
AXB19/PgnJ m 261536.0 0.0   1   0.0 0.0 261536.0, 261536.0 0.51
AXB1/PgnJ m 65058.0 0.0   1   0.0 0.0 65058.0, 65058.0 -1.92
AXB23/PgnJ m 224675.0 0.0   1   0.0 0.0 224675.0, 224675.0 0.05
AXB24/PgnJ m 385007.0 249540.0   2   176452.0 0.648 208556.0, 561458.0 2.03
AXB2/PgnJ m 73291.0 0.0   1   0.0 0.0 73291.0, 73291.0 -1.82
AXB4/PgnJ m 215995.0 0.0   1   0.0 0.0 215995.0, 215995.0 -0.06
AXB5/PgnJ m 277972.0 0.0   1   0.0 0.0 277972.0, 277972.0 0.71
AXB6/PgnJ m 253734.0 0.0   1   0.0 0.0 253734.0, 253734.0 0.41
AXB8/PgnJ m 193768.0 0.0   1   0.0 0.0 193768.0, 193768.0 -0.33
BALB/cJ m 164147.0 57178.0   3 33012.0 0.348 99432.0, 207833.0 -0.7
BTBR T+ Itpr3tf/J m 260631.0 0.0   1   0.0 0.0 260631.0, 260631.0 0.5
BUB/BnJ m 151728.0 0.0   1   0.0 0.0 151728.0, 151728.0 -0.85
BXA11/PgnJ m 283246.0 0.0   1   0.0 0.0 283246.0, 283246.0 0.77
BXA12/PgnJ m 119098.0 0.0   1   0.0 0.0 119098.0, 119098.0 -1.25
BXA13/PgnJ m 193182.0 0.0   1   0.0 0.0 193182.0, 193182.0 -0.34
BXA14/PgnJ m 187197.0 0.0   1   0.0 0.0 187197.0, 187197.0 -0.41
BXA16/PgnJ m 210579.0 57886.0   2   40932.0 0.275 169647.0, 251511.0 -0.12
BXA1/PgnJ m 307838.0 0.0   1   0.0 0.0 307838.0, 307838.0 1.08
BXA24/PgnJ m 178252.0 0.0   1   0.0 0.0 178252.0, 178252.0 -0.52
BXA25/PgnJ m 274638.0 0.0   1   0.0 0.0 274638.0, 274638.0 0.67
BXA26/PgnJ m 305792.0 0.0   1   0.0 0.0 305792.0, 305792.0 1.05
BXA2/PgnJ m 320527.0 0.0   1   0.0 0.0 320527.0, 320527.0 1.24
BXA4/PgnJ m 70780.0 0.0   1   0.0 0.0 70780.0, 70780.0 -1.85
BXA7/PgnJ m 257182.0 0.0   1   0.0 0.0 257182.0, 257182.0 0.45
BXA8/PgnJ m 318032.0 0.0   1   0.0 0.0 318032.0, 318032.0 1.2
BXD11/TyJ m 137193.0 0.0   1   0.0 0.0 137193.0, 137193.0 -1.03
BXD12/TyJ m 185821.0 0.0   1   0.0 0.0 185821.0, 185821.0 -0.43
BXD13/TyJ m 323897.0 0.0   1   0.0 0.0 323897.0, 323897.0 1.28
BXD14/TyJ m 189838.0 0.0   1   0.0 0.0 189838.0, 189838.0 -0.38
BXD15/TyJ m 135944.0 0.0   1   0.0 0.0 135944.0, 135944.0 -1.04
BXD18/TyJ m 212302.0 0.0   1   0.0 0.0 212302.0, 212302.0 -0.1
BXD19/TyJ m 201366.0 38863.0   2   27480.0 0.193 173886.0, 228846.0 -0.24
BXD1/TyJ m 310628.0 0.0   1   0.0 0.0 310628.0, 310628.0 1.11
BXD20/TyJ m 211310.0 0.0   1   0.0 0.0 211310.0, 211310.0 -0.11
BXD21/TyJ m 222592.0 0.0   1   0.0 0.0 222592.0, 222592.0 0.03
BXD22/TyJ m 119689.0 0.0   1   0.0 0.0 119689.0, 119689.0 -1.24
BXD24/TyJ m 132022.0 0.0   1   0.0 0.0 132022.0, 132022.0 -1.09
BXD24/TyJ-Cep290rd16/J m 155546.0 0.0   1   0.0 0.0 155546.0, 155546.0 -0.8
BXD28/TyJ m 233402.0 85346.0   2   60349.0 0.366 173053.0, 293750.0 0.16
BXD29-Tlr4lps-2J/J m 340739.0 0.0   1   0.0 0.0 340739.0, 340739.0 1.48
BXD2/TyJ m 268661.0 0.0   1   0.0 0.0 268661.0, 268661.0 0.59
BXD32/TyJ m 172906.0 0.0   1   0.0 0.0 172906.0, 172906.0 -0.59
BXD33/TyJ m 144090.0 0.0   1   0.0 0.0 144090.0, 144090.0 -0.94
BXD34/TyJ m 139042.0 0.0   1   0.0 0.0 139042.0, 139042.0 -1.01
BXD36/TyJ m 213644.0 0.0   1   0.0 0.0 213644.0, 213644.0 -0.08
BXD38/TyJ m 70188.0 0.0   1   0.0 0.0 70188.0, 70188.0 -1.86
BXD39/TyJ m 419720.0 0.0   1   0.0 0.0 419720.0, 419720.0 2.46
BXD40/TyJ m 139015.0 0.0   1   0.0 0.0 139015.0, 139015.0 -1.01
BXD42/TyJ m 222475.0 0.0   1   0.0 0.0 222475.0, 222475.0 0.02
BXD5/TyJ m 298182.0 0.0   1   0.0 0.0 298182.0, 298182.0 0.96
BXD6/TyJ m 241111.0 0.0   1   0.0 0.0 241111.0, 241111.0 0.25
BXD8/TyJ m 260591.0 0.0   1   0.0 0.0 260591.0, 260591.0 0.5
BXD9/TyJ m 239520.0 0.0   1   0.0 0.0 239520.0, 239520.0 0.24
BXH10/TyJ m 202260.0 0.0   1   0.0 0.0 202260.0, 202260.0 -0.22
BXH19/TyJ m 170566.0 0.0   1   0.0 0.0 170566.0, 170566.0 -0.62
BXH20/KccJ m 290467.0 0.0   1   0.0 0.0 290467.0, 290467.0 0.86
BXH22/KccJ m 333070.0 0.0   1   0.0 0.0 333070.0, 333070.0 1.39
BXH2/TyJ m 207784.0 0.0   1   0.0 0.0 207784.0, 207784.0 -0.16
BXH4/TyJ m 268448.0 9438.0   2   6674.0 0.0352 261774.0, 275122.0 0.59
BXH6/TyJ m 301099.0 0.0   1   0.0 0.0 301099.0, 301099.0 1.0
BXH7/TyJ m 444656.0 0.0   1   0.0 0.0 444656.0, 444656.0 2.77
BXH8/TyJ m 281550.0 0.0   1   0.0 0.0 281550.0, 281550.0 0.75
BXH9/TyJ m 257710.0 0.0   1   0.0 0.0 257710.0, 257710.0 0.46
C3H/HeJ m 225495.0 5238.0   2   3704.0 0.0232 221791.0, 229199.0 0.06
C57BL/6J m 155354.0 40063.0   5 17917.0 0.258 114376.0, 210183.0 -0.8
C57L/J m 74249.0 0.0   1   0.0 0.0 74249.0, 74249.0 -1.81
C58/J m 287805.0 0.0   1   0.0 0.0 287805.0, 287805.0 0.83
CAST/EiJ m 210889.0 0.0   1   0.0 0.0 210889.0, 210889.0 -0.12
CBA/J m 266900.0 0.0   1   0.0 0.0 266900.0, 266900.0 0.57
CE/J m 95532.0 0.0   1   0.0 0.0 95532.0, 95532.0 -1.54
CXB11/HiAJ m 320463.0 31704.0   2   22418.0 0.0989 298045.0, 342881.0 1.23
CXB12/HiAJ m 168137.0 19634.0   2   13883.0 0.117 154254.0, 182021.0 -0.65
CXB13/HiAJ m 295126.0 255916.0   3 147753.0 0.867 80911.0, 578521.0 0.92
CXB1/ByJ m 250290.0 61627.0   3 35580.0 0.246 186430.0, 309410.0 0.37
CXB2/ByJ m 187934.0 66490.0   3 38388.0 0.354 124316.0, 256966.0 -0.4
CXB3/ByJ m 176737.0 30864.0   2   21824.0 0.175 154913.0, 198561.0 -0.54
CXB4/ByJ m 270415.0 29406.0   2   20793.0 0.109 249622.0, 291209.0 0.62
CXB6/ByJ m 228479.0 167684.0   3 96813.0 0.734 131327.0, 422104.0 0.1
CXB7/ByJ m 265034.0 96537.0   2   68262.0 0.364 196772.0, 333296.0 0.55
CXB8/HiAJ m 198312.0 51728.0   3 29865.0 0.261 141112.0, 241809.0 -0.27
CXB9/HiAJ m 171224.0 33995.0   3 19627.0 0.199 139445.0, 207069.0 -0.61
DBA/2J m 236750.0 65378.0   4 32689.0 0.276 175708.0, 320255.0 0.2
FVB/NJ m 104132.0 0.0   1   0.0 0.0 104132.0, 104132.0 -1.44
I/LnJ m 187883.0 0.0   1   0.0 0.0 187883.0, 187883.0 -0.4
KK/HlJ m 257478.0 0.0   1   0.0 0.0 257478.0, 257478.0 0.46
LG/J m 172241.0 0.0   1   0.0 0.0 172241.0, 172241.0 -0.6
LP/J m 252182.0 0.0   1   0.0 0.0 252182.0, 252182.0 0.39
MA/MyJ m 130503.0 0.0   1   0.0 0.0 130503.0, 130503.0 -1.11
NOD/ShiLtJ m 125291.0 0.0   1   0.0 0.0 125291.0, 125291.0 -1.18
NON/ShiLtJ m 141815.0 0.0   1   0.0 0.0 141815.0, 141815.0 -0.97
NZW/LacJ m 280066.0 0.0   1   0.0 0.0 280066.0, 280066.0 0.74
PL/J m 170252.0 0.0   1   0.0 0.0 170252.0, 170252.0 -0.62
RIIIS/J m 356790.0 0.0   1   0.0 0.0 356790.0, 356790.0 1.68
SEA/GnJ m 149552.0 0.0   1   0.0 0.0 149552.0, 149552.0 -0.88
SJL/J m 164191.0 0.0   1   0.0 0.0 164191.0, 164191.0 -0.69
SM/J m 75154.0 0.0   1   0.0 0.0 75154.0, 75154.0 -1.79
SWR/J m 115993.0 0.0   1   0.0 0.0 115993.0, 115993.0 -1.29


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 253223.35 72545.8081 400654.1702 105792.5298
AXB19b/PgnJ m 233087.2 72545.8081 380518.0202 85656.3798
AXB24/PgnJ m 385007.0 72545.8081 532437.8202 237576.1798
BALB/cJ m 164146.9333 59233.4043 284523.6939 43770.1727
BXA16/PgnJ m 210579.3 72545.8081 358010.1202 63148.4798
BXD19/TyJ m 201366.35 72545.8081 348797.1702 53935.5298
BXD28/TyJ m 233401.6 72545.8081 380832.4202 85970.7798
BXH4/TyJ m 268448.45 72545.8081 415879.2702 121017.6298
C3H/HeJ m 225495.2 72545.8081 372926.0202 78064.3798
C57BL/6J m 155353.54 45881.9977 248596.9778 62110.1022
CXB11/HiAJ m 320463.0 72545.8081 467893.8202 173032.1798
CXB12/HiAJ m 168137.15 72545.8081 315567.9702 20706.3298
CXB13/HiAJ m 295126.2333 59233.4043 415502.9939 174749.4727
CXB1/ByJ m 250290.1667 59233.4043 370666.9273 129913.4061
CXB2/ByJ m 187934.3667 59233.4043 308311.1273 67557.6061
CXB3/ByJ m 176737.1 72545.8081 324167.9202 29306.2798
CXB4/ByJ m 270415.45 72545.8081 417846.2702 122984.6298
CXB6/ByJ m 228479.1 59233.4043 348855.8606 108102.3394
CXB7/ByJ m 265034.5 72545.8081 412465.3202 117603.6798
CXB8/HiAJ m 198312.0333 59233.4043 318688.7939 77935.2727
CXB9/HiAJ m 171224.0667 59233.4043 291600.8273 50847.3061
DBA/2J m 236750.225 51297.6329 340999.5577 132500.8923




  GWAS USING LINEAR MIXED MODELS