Project measure / variable:   HMDPpheno7   erythronate

ID, description, units MPD:50201   erythronate   liver erythronate (16h fast), relative abundance    
Data set, strains HMDPpheno7   HMDP   102 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno7 - liver erythronate (16h fast), relative abundance

RIIIS/JAXB24/PgnJCAST/EiJBXD33/TyJAXB19a/PgnJBXD19/TyJKK/HlJCXB3/ByJCXB1/ByJCE/JBXH20/KccJBXH4/TyJBXA14/PgnJBXH6/TyJBALB/cJCXB4/ByJBXA2/PgnJCXB8/HiAJBXD32/TyJBXD5/TyJBXD6/TyJCXB13/HiAJCXB2/ByJBXA4/PgnJAXB13/PgnJAXB15/PgnJBXD8/TyJSWR/JBXA24/PgnJBXH19/TyJC3H/HeJBTBR T<+> Itpr3<tf>/JBXH8/TyJBXA7/PgnJBXD13/TyJBXA11/PgnJBXA26/PgnJAXB19b/PgnJAXB23/PgnJAXB10/PgnJBXH2/TyJPL/JBXD24/TyJBXD14/TyJBXA8/PgnJ129X1/SvJBXD15/TyJCXB9/HiAJMA/MyJBXD11/TyJBXA1/PgnJBXD42/TyJI/LnJAXB5/PgnJBXD9/TyJCXB7/ByJC57BL/6JFVB/NJAXB6/PgnJBXD18/TyJBXA25/PgnJAKR/JLG/JDBA/2JBXA16/PgnJCXB12/HiAJCXB11/HiAJA/JBXD39/TyJCXB6/ByJAXB8/PgnJBXD20/TyJBXD38/TyJBXD40/TyJBXD2/TyJBXD1/TyJBXH9/TyJSM/JBXD36/TyJAXB19/PgnJBUB/BnJAXB12/PgnJBXH7/TyJBXD12/TyJAXB1/PgnJSJL/JAXB4/PgnJC57L/JBXA13/PgnJAXB2/PgnJC58/JBXD21/TyJBXD34/TyJBXH10/TyJBXD22/TyJBXD28/TyJSEA/GnJBXA12/PgnJCBA/JNOD/ShiLtJLP/JBXH22/KccJ (no units) 15,00020,00025,00030,00035,00040,00045,00050,00055,00060,00065,00070,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested102 strains
Mean of the strain means31697   None
Median of the strain means30030   None
SD of the strain means± 9096
Coefficient of variation (CV)0.287
Min–max range of strain means14704   –   69080   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 18 2838433722.1616 157690762.3423 1.4713 0.168
Residuals 31 3322589985.9562 107180322.1276


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 102 (102)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 30672.0 0.0   1   0.0 0.0 30672.0, 30672.0 -0.11
A/J m 27853.0 1705.0   2   1206.0 0.0612 26647.0, 29058.0 -0.42
AKR/J m 28595.0 0.0   1   0.0 0.0 28595.0, 28595.0 -0.34
AXB10/PgnJ m 32634.0 0.0   1   0.0 0.0 32634.0, 32634.0 0.1
AXB12/PgnJ m 24663.0 0.0   1   0.0 0.0 24663.0, 24663.0 -0.77
AXB13/PgnJ m 37442.0 0.0   1   0.0 0.0 37442.0, 37442.0 0.63
AXB15/PgnJ m 37282.0 0.0   1   0.0 0.0 37282.0, 37282.0 0.61
AXB19a/PgnJ m 48299.0 0.0   1   0.0 0.0 48299.0, 48299.0 1.83
AXB19b/PgnJ m 32832.0 1776.0   2   1256.0 0.0541 31576.0, 34087.0 0.12
AXB19/PgnJ m 25150.0 0.0   1   0.0 0.0 25150.0, 25150.0 -0.72
AXB1/PgnJ m 23739.0 0.0   1   0.0 0.0 23739.0, 23739.0 -0.87
AXB23/PgnJ m 32725.0 0.0   1   0.0 0.0 32725.0, 32725.0 0.11
AXB24/PgnJ m 52860.0 12385.0   2   8757.0 0.234 44102.0, 61617.0 2.33
AXB2/PgnJ m 21689.0 0.0   1   0.0 0.0 21689.0, 21689.0 -1.1
AXB4/PgnJ m 22871.0 0.0   1   0.0 0.0 22871.0, 22871.0 -0.97
AXB5/PgnJ m 29590.0 0.0   1   0.0 0.0 29590.0, 29590.0 -0.23
AXB6/PgnJ m 28817.0 0.0   1   0.0 0.0 28817.0, 28817.0 -0.32
AXB8/PgnJ m 27406.0 0.0   1   0.0 0.0 27406.0, 27406.0 -0.47
BALB/cJ m 41483.0 12862.0   3 7426.0 0.31 33225.0, 56302.0 1.08
BTBR T+ Itpr3tf/J m 35151.0 0.0   1   0.0 0.0 35151.0, 35151.0 0.38
BUB/BnJ m 24869.0 0.0   1   0.0 0.0 24869.0, 24869.0 -0.75
BXA11/PgnJ m 33677.0 0.0   1   0.0 0.0 33677.0, 33677.0 0.22
BXA12/PgnJ m 17462.0 0.0   1   0.0 0.0 17462.0, 17462.0 -1.57
BXA13/PgnJ m 22045.0 0.0   1   0.0 0.0 22045.0, 22045.0 -1.06
BXA14/PgnJ m 42821.0 0.0   1   0.0 0.0 42821.0, 42821.0 1.22
BXA16/PgnJ m 28176.0 0.0   1   0.0 0.0 28176.0, 28176.0 -0.39
BXA1/PgnJ m 30086.0 0.0   1   0.0 0.0 30086.0, 30086.0 -0.18
BXA24/PgnJ m 35930.0 0.0   1   0.0 0.0 35930.0, 35930.0 0.47
BXA25/PgnJ m 28606.0 0.0   1   0.0 0.0 28606.0, 28606.0 -0.34
BXA26/PgnJ m 33572.0 0.0   1   0.0 0.0 33572.0, 33572.0 0.21
BXA2/PgnJ m 40857.0 0.0   1   0.0 0.0 40857.0, 40857.0 1.01
BXA4/PgnJ m 38073.0 0.0   1   0.0 0.0 38073.0, 38073.0 0.7
BXA7/PgnJ m 34170.0 0.0   1   0.0 0.0 34170.0, 34170.0 0.27
BXA8/PgnJ m 30830.0 0.0   1   0.0 0.0 30830.0, 30830.0 -0.1
BXD11/TyJ m 30187.0 0.0   1   0.0 0.0 30187.0, 30187.0 -0.17
BXD12/TyJ m 24221.0 0.0   1   0.0 0.0 24221.0, 24221.0 -0.82
BXD13/TyJ m 34067.0 0.0   1   0.0 0.0 34067.0, 34067.0 0.26
BXD14/TyJ m 30871.0 0.0   1   0.0 0.0 30871.0, 30871.0 -0.09
BXD15/TyJ m 30618.0 0.0   1   0.0 0.0 30618.0, 30618.0 -0.12
BXD18/TyJ m 28792.0 0.0   1   0.0 0.0 28792.0, 28792.0 -0.32
BXD19/TyJ m 47482.0 0.0   1   0.0 0.0 47482.0, 47482.0 1.74
BXD1/TyJ m 25922.0 0.0   1   0.0 0.0 25922.0, 25922.0 -0.63
BXD20/TyJ m 27373.0 0.0   1   0.0 0.0 27373.0, 27373.0 -0.48
BXD21/TyJ m 21099.0 0.0   1   0.0 0.0 21099.0, 21099.0 -1.17
BXD22/TyJ m 20740.0 0.0   1   0.0 0.0 20740.0, 20740.0 -1.2
BXD24/TyJ m 31942.0 0.0   1   0.0 0.0 31942.0, 31942.0 0.03
BXD28/TyJ m 19024.0 5953.0   2   4209.0 0.313 14814.0, 23233.0 -1.39
BXD2/TyJ m 25964.0 0.0   1   0.0 0.0 25964.0, 25964.0 -0.63
BXD32/TyJ m 40011.0 0.0   1   0.0 0.0 40011.0, 40011.0 0.91
BXD33/TyJ m 48394.0 0.0   1   0.0 0.0 48394.0, 48394.0 1.84
BXD34/TyJ m 20877.0 0.0   1   0.0 0.0 20877.0, 20877.0 -1.19
BXD36/TyJ m 25325.0 0.0   1   0.0 0.0 25325.0, 25325.0 -0.7
BXD38/TyJ m 27325.0 0.0   1   0.0 0.0 27325.0, 27325.0 -0.48
BXD39/TyJ m 27508.0 0.0   1   0.0 0.0 27508.0, 27508.0 -0.46
BXD40/TyJ m 27048.0 0.0   1   0.0 0.0 27048.0, 27048.0 -0.51
BXD42/TyJ m 29975.0 0.0   1   0.0 0.0 29975.0, 29975.0 -0.19
BXD5/TyJ m 38952.0 0.0   1   0.0 0.0 38952.0, 38952.0 0.8
BXD6/TyJ m 38421.0 0.0   1   0.0 0.0 38421.0, 38421.0 0.74
BXD8/TyJ m 37027.0 0.0   1   0.0 0.0 37027.0, 37027.0 0.59
BXD9/TyJ m 29557.0 0.0   1   0.0 0.0 29557.0, 29557.0 -0.24
BXH10/TyJ m 20810.0 0.0   1   0.0 0.0 20810.0, 20810.0 -1.2
BXH19/TyJ m 35867.0 0.0   1   0.0 0.0 35867.0, 35867.0 0.46
BXH20/KccJ m 43304.0 0.0   1   0.0 0.0 43304.0, 43304.0 1.28
BXH22/KccJ m 14704.0 0.0   1   0.0 0.0 14704.0, 14704.0 -1.87
BXH2/TyJ m 32013.0 0.0   1   0.0 0.0 32013.0, 32013.0 0.03
BXH4/TyJ m 42838.0 20301.0   2   14355.0 0.474 28483.0, 57193.0 1.22
BXH6/TyJ m 42067.0 0.0   1   0.0 0.0 42067.0, 42067.0 1.14
BXH7/TyJ m 24515.0 0.0   1   0.0 0.0 24515.0, 24515.0 -0.79
BXH8/TyJ m 34436.0 0.0   1   0.0 0.0 34436.0, 34436.0 0.3
BXH9/TyJ m 25757.0 0.0   1   0.0 0.0 25757.0, 25757.0 -0.65
C3H/HeJ m 35809.0 11209.0   2   7926.0 0.313 27883.0, 43735.0 0.45
C57BL/6J m 29118.0 5159.0   5 2307.0 0.177 21933.0, 34625.0 -0.28
C57L/J m 22630.0 0.0   1   0.0 0.0 22630.0, 22630.0 -1.0
C58/J m 21202.0 0.0   1   0.0 0.0 21202.0, 21202.0 -1.15
CAST/EiJ m 51772.0 0.0   1   0.0 0.0 51772.0, 51772.0 2.21
CBA/J m 17400.0 0.0   1   0.0 0.0 17400.0, 17400.0 -1.57
CE/J m 43844.0 0.0   1   0.0 0.0 43844.0, 43844.0 1.34
CXB11/HiAJ m 27907.0 2804.0   2   1983.0 0.1 25925.0, 29890.0 -0.42
CXB12/HiAJ m 28171.0 5090.0   2   3599.0 0.181 24572.0, 31770.0 -0.39
CXB13/HiAJ m 38380.0 22929.0   3 13238.0 0.597 24689.0, 64851.0 0.73
CXB1/ByJ m 44477.0 8237.0   3 4756.0 0.185 35042.0, 50240.0 1.41
CXB2/ByJ m 38378.0 3976.0   3 2295.0 0.104 34331.0, 42279.0 0.73
CXB3/ByJ m 45526.0 0.0   1   0.0 0.0 45526.0, 45526.0 1.52
CXB4/ByJ m 41139.0 10146.0   2   7174.0 0.247 33964.0, 48313.0 1.04
CXB6/ByJ m 27501.0 6390.0   3 3689.0 0.232 21114.0, 33895.0 -0.46
CXB7/ByJ m 29218.0 9842.0   2   6960.0 0.337 22258.0, 36177.0 -0.27
CXB8/HiAJ m 40568.0 10177.0   3 5876.0 0.251 28856.0, 47264.0 0.98
CXB9/HiAJ m 30618.0 13387.0   3 7729.0 0.437 15945.0, 42164.0 -0.12
DBA/2J m 28251.0 4204.0   4 2102.0 0.149 24243.0, 33278.0 -0.38
FVB/NJ m 29094.0 0.0   1   0.0 0.0 29094.0, 29094.0 -0.29
I/LnJ m 29705.0 0.0   1   0.0 0.0 29705.0, 29705.0 -0.22
KK/HlJ m 46470.0 0.0   1   0.0 0.0 46470.0, 46470.0 1.62
LG/J m 28566.0 0.0   1   0.0 0.0 28566.0, 28566.0 -0.34
LP/J m 16620.0 0.0   1   0.0 0.0 16620.0, 16620.0 -1.66
MA/MyJ m 30403.0 0.0   1   0.0 0.0 30403.0, 30403.0 -0.14
NOD/ShiLtJ m 17396.0 0.0   1   0.0 0.0 17396.0, 17396.0 -1.57
PL/J m 31961.0 0.0   1   0.0 0.0 31961.0, 31961.0 0.03
RIIIS/J m 69080.0 0.0   1   0.0 0.0 69080.0, 69080.0 4.11
SEA/GnJ m 18048.0 0.0   1   0.0 0.0 18048.0, 18048.0 -1.5
SJL/J m 23476.0 0.0   1   0.0 0.0 23476.0, 23476.0 -0.9
SM/J m 25537.0 0.0   1   0.0 0.0 25537.0, 25537.0 -0.68
SWR/J m 36888.0 0.0   1   0.0 0.0 36888.0, 36888.0 0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 27852.75 7320.5301 42783.0696 12922.4304
AXB19b/PgnJ m 32831.75 7320.5301 47762.0696 17901.4304
AXB24/PgnJ m 52859.6 7320.5301 67789.9196 37929.2804
BALB/cJ m 41482.5667 5977.1878 53673.1216 29292.0118
BXD28/TyJ m 19023.85 7320.5301 33954.1696 4093.5304
BXH4/TyJ m 42837.95 7320.5301 57768.2696 27907.6304
C3H/HeJ m 35809.1 7320.5301 50739.4196 20878.7804
C57BL/6J m 29117.76 4629.9098 38560.5232 19674.9968
CXB11/HiAJ m 27907.45 7320.5301 42837.7696 12977.1304
CXB12/HiAJ m 28171.3 7320.5301 43101.6196 13240.9804
CXB13/HiAJ m 38380.4667 5977.1878 50571.0216 26189.9118
CXB1/ByJ m 44476.5333 5977.1878 56667.0882 32285.9784
CXB2/ByJ m 38378.4 5977.1878 50568.9549 26187.8451
CXB4/ByJ m 41138.9 7320.5301 56069.2196 26208.5804
CXB6/ByJ m 27501.2333 5977.1878 39691.7882 15310.6784
CXB7/ByJ m 29217.75 7320.5301 44148.0696 14287.4304
CXB8/HiAJ m 40567.5 5977.1878 52758.0549 28376.9451
CXB9/HiAJ m 30618.3 5977.1878 42808.8549 18427.7451
DBA/2J m 28250.575 5176.3965 38807.9052 17693.2448




  GWAS USING LINEAR MIXED MODELS

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