Project measure / variable:   HMDPpheno6   tiglyl_carnitine

ID, description, units MPD:50176   tiglyl_carnitine   liver tiglyl carnitine (16h fast), relative abundance    
Data set, strains HMDPpheno6   HMDP w/par   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

HMDPpheno6 - liver tiglyl carnitine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means174531   None
Median of the strain means161948   None
SD of the strain means± 72982
Coefficient of variation (CV)0.418
Min–max range of strain means54140   –   580554   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 103710266270.129 4938584108.1014 2.0165 0.0334
Residuals 34 83270005001.8222 2449117794.1712


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 135297.0 0.0   1   0.0 0.0 135297.0, 135297.0 -0.54
A/J m 176452.0 102989.0   2   72824.0 0.584 103628.0, 249276.0 0.03
AKR/J m 172811.0 0.0   1   0.0 0.0 172811.0, 172811.0 -0.02
AXB10/PgnJ m 147732.0 0.0   1   0.0 0.0 147732.0, 147732.0 -0.37
AXB12/PgnJ m 148141.0 0.0   1   0.0 0.0 148141.0, 148141.0 -0.36
AXB13/PgnJ m 99888.0 0.0   1   0.0 0.0 99888.0, 99888.0 -1.02
AXB15/PgnJ m 161898.0 0.0   1   0.0 0.0 161898.0, 161898.0 -0.17
AXB19a/PgnJ m 131775.0 0.0   1   0.0 0.0 131775.0, 131775.0 -0.59
AXB19b/PgnJ m 171460.0 41869.0   2   29606.0 0.244 141855.0, 201066.0 -0.04
AXB19/PgnJ m 151659.0 0.0   1   0.0 0.0 151659.0, 151659.0 -0.31
AXB1/PgnJ m 257828.0 0.0   1   0.0 0.0 257828.0, 257828.0 1.14
AXB23/PgnJ m 125513.0 0.0   1   0.0 0.0 125513.0, 125513.0 -0.67
AXB24/PgnJ m 111902.0 11871.0   2   8394.0 0.106 103508.0, 120296.0 -0.86
AXB2/PgnJ m 189896.0 0.0   1   0.0 0.0 189896.0, 189896.0 0.21
AXB4/PgnJ m 194493.0 0.0   1   0.0 0.0 194493.0, 194493.0 0.27
AXB5/PgnJ m 105045.0 0.0   1   0.0 0.0 105045.0, 105045.0 -0.95
AXB6/PgnJ m 152172.0 0.0   1   0.0 0.0 152172.0, 152172.0 -0.31
AXB8/PgnJ m 149633.0 0.0   1   0.0 0.0 149633.0, 149633.0 -0.34
BALB/cJ m 172684.0 25817.0   3 14905.0 0.15 151942.0, 201598.0 -0.03
BTBR T+ Itpr3tf/J m 115877.0 0.0   1   0.0 0.0 115877.0, 115877.0 -0.8
BUB/BnJ m 372302.0 0.0   1   0.0 0.0 372302.0, 372302.0 2.71
BXA11/PgnJ m 185353.0 0.0   1   0.0 0.0 185353.0, 185353.0 0.15
BXA12/PgnJ m 128950.0 0.0   1   0.0 0.0 128950.0, 128950.0 -0.62
BXA13/PgnJ m 117689.0 0.0   1   0.0 0.0 117689.0, 117689.0 -0.78
BXA14/PgnJ m 54140.0 0.0   1   0.0 0.0 54140.0, 54140.0 -1.65
BXA16/PgnJ m 175008.0 77798.0   2   55011.0 0.445 119997.0, 230020.0 0.01
BXA1/PgnJ m 68986.0 0.0   1   0.0 0.0 68986.0, 68986.0 -1.45
BXA24/PgnJ m 149940.0 0.0   1   0.0 0.0 149940.0, 149940.0 -0.34
BXA25/PgnJ m 127916.0 0.0   1   0.0 0.0 127916.0, 127916.0 -0.64
BXA26/PgnJ m 163900.0 0.0   1   0.0 0.0 163900.0, 163900.0 -0.15
BXA2/PgnJ m 143832.0 0.0   1   0.0 0.0 143832.0, 143832.0 -0.42
BXA4/PgnJ m 184289.0 0.0   1   0.0 0.0 184289.0, 184289.0 0.13
BXA7/PgnJ m 147438.0 0.0   1   0.0 0.0 147438.0, 147438.0 -0.37
BXA8/PgnJ m 79665.0 0.0   1   0.0 0.0 79665.0, 79665.0 -1.3
BXD11/TyJ m 205684.0 0.0   1   0.0 0.0 205684.0, 205684.0 0.43
BXD12/TyJ m 220260.0 0.0   1   0.0 0.0 220260.0, 220260.0 0.63
BXD13/TyJ m 170119.0 0.0   1   0.0 0.0 170119.0, 170119.0 -0.06
BXD14/TyJ m 112308.0 0.0   1   0.0 0.0 112308.0, 112308.0 -0.85
BXD15/TyJ m 306227.0 0.0   1   0.0 0.0 306227.0, 306227.0 1.8
BXD18/TyJ m 149712.0 0.0   1   0.0 0.0 149712.0, 149712.0 -0.34
BXD19/TyJ m 208674.0 37028.0   2   26183.0 0.177 182492.0, 234857.0 0.47
BXD1/TyJ m 183369.0 0.0   1   0.0 0.0 183369.0, 183369.0 0.12
BXD20/TyJ m 264510.0 0.0   1   0.0 0.0 264510.0, 264510.0 1.23
BXD21/TyJ m 261941.0 0.0   1   0.0 0.0 261941.0, 261941.0 1.2
BXD22/TyJ m 156707.0 0.0   1   0.0 0.0 156707.0, 156707.0 -0.24
BXD24/TyJ m 222623.0 0.0   1   0.0 0.0 222623.0, 222623.0 0.66
BXD24/TyJ-Cep290rd16/J m 377214.0 0.0   1   0.0 0.0 377214.0, 377214.0 2.78
BXD28/TyJ m 211107.0 48369.0   2   34202.0 0.229 176905.0, 245309.0 0.5
BXD29-Tlr4lps-2J/J m 240986.0 0.0   1   0.0 0.0 240986.0, 240986.0 0.91
BXD2/TyJ m 236223.0 0.0   1   0.0 0.0 236223.0, 236223.0 0.85
BXD32/TyJ m 179156.0 0.0   1   0.0 0.0 179156.0, 179156.0 0.06
BXD33/TyJ m 208919.0 0.0   1   0.0 0.0 208919.0, 208919.0 0.47
BXD34/TyJ m 240955.0 0.0   1   0.0 0.0 240955.0, 240955.0 0.91
BXD36/TyJ m 263616.0 0.0   1   0.0 0.0 263616.0, 263616.0 1.22
BXD38/TyJ m 149230.0 0.0   1   0.0 0.0 149230.0, 149230.0 -0.35
BXD39/TyJ m 170060.0 0.0   1   0.0 0.0 170060.0, 170060.0 -0.06
BXD40/TyJ m 198988.0 0.0   1   0.0 0.0 198988.0, 198988.0 0.34
BXD42/TyJ m 197247.0 0.0   1   0.0 0.0 197247.0, 197247.0 0.31
BXD5/TyJ m 135693.0 0.0   1   0.0 0.0 135693.0, 135693.0 -0.53
BXD6/TyJ m 324460.0 0.0   1   0.0 0.0 324460.0, 324460.0 2.05
BXD8/TyJ m 153140.0 0.0   1   0.0 0.0 153140.0, 153140.0 -0.29
BXD9/TyJ m 204858.0 0.0   1   0.0 0.0 204858.0, 204858.0 0.42
BXH10/TyJ m 104472.0 0.0   1   0.0 0.0 104472.0, 104472.0 -0.96
BXH19/TyJ m 131695.0 0.0   1   0.0 0.0 131695.0, 131695.0 -0.59
BXH20/KccJ m 108339.0 0.0   1   0.0 0.0 108339.0, 108339.0 -0.91
BXH22/KccJ m 167658.0 0.0   1   0.0 0.0 167658.0, 167658.0 -0.09
BXH2/TyJ m 169799.0 0.0   1   0.0 0.0 169799.0, 169799.0 -0.06
BXH4/TyJ m 107755.0 3261.0   2   2306.0 0.0303 105450.0, 110061.0 -0.91
BXH6/TyJ m 129448.0 0.0   1   0.0 0.0 129448.0, 129448.0 -0.62
BXH7/TyJ m 349980.0 0.0   1   0.0 0.0 349980.0, 349980.0 2.4
BXH8/TyJ m 160700.0 0.0   1   0.0 0.0 160700.0, 160700.0 -0.19
BXH9/TyJ m 143102.0 0.0   1   0.0 0.0 143102.0, 143102.0 -0.43
C3H/HeJ m 177709.0 5348.0   2   3782.0 0.0301 173927.0, 181491.0 0.04
C57BL/6J m 165225.0 64697.0   5 28933.0 0.392 92177.0, 259681.0 -0.13
C57L/J m 149987.0 0.0   1   0.0 0.0 149987.0, 149987.0 -0.34
C58/J m 580554.0 0.0   1   0.0 0.0 580554.0, 580554.0 5.56
CAST/EiJ m 87776.0 0.0   1   0.0 0.0 87776.0, 87776.0 -1.19
CBA/J m 108599.0 0.0   1   0.0 0.0 108599.0, 108599.0 -0.9
CE/J m 157132.0 0.0   1   0.0 0.0 157132.0, 157132.0 -0.24
CXB11/HiAJ m 180249.0 71139.0   2   50303.0 0.395 129946.0, 230552.0 0.08
CXB12/HiAJ m 224555.0 78002.0   2   55156.0 0.347 169399.0, 279711.0 0.69
CXB13/HiAJ m 161997.0 22811.0   3 13170.0 0.141 136968.0, 181618.0 -0.17
CXB1/ByJ m 89337.0 17894.0   3 10331.0 0.2 78748.0, 109998.0 -1.17
CXB2/ByJ m 169684.0 85571.0   3 49405.0 0.504 96127.0, 263598.0 -0.07
CXB3/ByJ m 143381.0 9912.0   2   7009.0 0.0691 136372.0, 150390.0 -0.43
CXB4/ByJ m 111961.0 20904.0   2   14781.0 0.187 97180.0, 126742.0 -0.86
CXB6/ByJ m 199632.0 24297.0   3 14028.0 0.122 172261.0, 218655.0 0.34
CXB7/ByJ m 118506.0 8955.0   2   6332.0 0.0756 112174.0, 124838.0 -0.77
CXB8/HiAJ m 137719.0 54297.0   3 31348.0 0.394 101582.0, 200158.0 -0.5
CXB9/HiAJ m 108777.0 22575.0   3 13033.0 0.208 86704.0, 131822.0 -0.9
DBA/2J m 253618.0 47288.0   4 23644.0 0.186 185368.0, 294548.0 1.08
FVB/NJ m 260947.0 0.0   1   0.0 0.0 260947.0, 260947.0 1.18
I/LnJ m 128320.0 0.0   1   0.0 0.0 128320.0, 128320.0 -0.63
KK/HlJ m 109542.0 0.0   1   0.0 0.0 109542.0, 109542.0 -0.89
LG/J m 205558.0 0.0   1   0.0 0.0 205558.0, 205558.0 0.43
LP/J m 178827.0 0.0   1   0.0 0.0 178827.0, 178827.0 0.06
MA/MyJ m 125308.0 0.0   1   0.0 0.0 125308.0, 125308.0 -0.67
NOD/ShiLtJ m 110852.0 0.0   1   0.0 0.0 110852.0, 110852.0 -0.87
NON/ShiLtJ m 115911.0 0.0   1   0.0 0.0 115911.0, 115911.0 -0.8
NZW/LacJ m 133065.0 0.0   1   0.0 0.0 133065.0, 133065.0 -0.57
PL/J m 187012.0 0.0   1   0.0 0.0 187012.0, 187012.0 0.17
RIIIS/J m 235874.0 0.0   1   0.0 0.0 235874.0, 235874.0 0.84
SEA/GnJ m 131288.0 0.0   1   0.0 0.0 131288.0, 131288.0 -0.59
SJL/J m 105658.0 0.0   1   0.0 0.0 105658.0, 105658.0 -0.94
SM/J m 171124.0 0.0   1   0.0 0.0 171124.0, 171124.0 -0.05
SWR/J m 276112.0 0.0   1   0.0 0.0 276112.0, 276112.0 1.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 176451.7 34993.698 247567.4505 105335.9495
AXB19b/PgnJ m 171460.45 34993.698 242576.2005 100344.6995
AXB24/PgnJ m 111902.35 34993.698 183018.1005 40786.5995
BALB/cJ m 172684.0333 28572.2347 230749.8005 114618.2662
BXA16/PgnJ m 175008.25 34993.698 246124.0005 103892.4995
BXD19/TyJ m 208674.25 34993.698 279790.0005 137558.4995
BXD28/TyJ m 211107.05 34993.698 282222.8005 139991.2995
BXH4/TyJ m 107755.45 34993.698 178871.2005 36639.6995
C3H/HeJ m 177708.65 34993.698 248824.4005 106592.8995
C57BL/6J m 165225.42 22131.9579 210202.9698 120247.8702
CXB11/HiAJ m 180248.8 34993.698 251364.5505 109133.0495
CXB12/HiAJ m 224555.2 34993.698 295670.9505 153439.4495
CXB13/HiAJ m 161996.7 28572.2347 220062.4672 103930.9328
CXB1/ByJ m 89337.0333 28572.2347 147402.8005 31271.2662
CXB2/ByJ m 169684.2333 28572.2347 227750.0005 111618.4662
CXB3/ByJ m 143381.05 34993.698 214496.8005 72265.2995
CXB4/ByJ m 111961.3 34993.698 183077.0505 40845.5495
CXB6/ByJ m 199631.5 28572.2347 257697.2672 141565.7328
CXB7/ByJ m 118505.8 34993.698 189621.5505 47390.0495
CXB8/HiAJ m 137719.1333 28572.2347 195784.9005 79653.3662
CXB9/HiAJ m 108776.8 28572.2347 166842.5672 50711.0328
DBA/2J m 253617.525 24744.2811 303903.9545 203331.0955




  GWAS USING LINEAR MIXED MODELS