Project measure / variable:   HMDPpheno6   acetylornithine

ID, description, units MPD:50160   acetylornithine   liver N-acetylornithine (16h fast), relative abundance    
Data set, strains HMDPpheno6   HMDP w/par   103 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno6 - liver N-acetylornithine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested103 strains
Mean of the strain means90410   None
Median of the strain means86353   None
SD of the strain means± 39436
Coefficient of variation (CV)0.436
Min–max range of strain means27965   –   320682   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 20 59380606411.3797 2969030320.569 4.9682 < 0.0001
Residuals 33 19721018290.3056 597606614.8577


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 57567.0 0.0   1   0.0 0.0 57567.0, 57567.0 -0.83
A/J m 73028.0 8112.0   2   5736.0 0.111 67292.0, 78764.0 -0.44
AXB10/PgnJ m 105333.0 0.0   1   0.0 0.0 105333.0, 105333.0 0.38
AXB12/PgnJ m 122357.0 0.0   1   0.0 0.0 122357.0, 122357.0 0.81
AXB13/PgnJ m 79167.0 0.0   1   0.0 0.0 79167.0, 79167.0 -0.29
AXB15/PgnJ m 110523.0 0.0   1   0.0 0.0 110523.0, 110523.0 0.51
AXB19a/PgnJ m 101798.0 0.0   1   0.0 0.0 101798.0, 101798.0 0.29
AXB19b/PgnJ m 175281.0 67143.0   2   47477.0 0.383 127803.0, 222758.0 2.15
AXB19/PgnJ m 143662.0 0.0   1   0.0 0.0 143662.0, 143662.0 1.35
AXB1/PgnJ m 320682.0 0.0   1   0.0 0.0 320682.0, 320682.0 5.84
AXB23/PgnJ m 92858.0 0.0   1   0.0 0.0 92858.0, 92858.0 0.06
AXB24/PgnJ m 180758.0 41856.0   2   29596.0 0.232 151162.0, 210355.0 2.29
AXB2/PgnJ m 114109.0 0.0   1   0.0 0.0 114109.0, 114109.0 0.6
AXB4/PgnJ m 146305.0 0.0   1   0.0 0.0 146305.0, 146305.0 1.42
AXB5/PgnJ m 107815.0 0.0   1   0.0 0.0 107815.0, 107815.0 0.44
AXB6/PgnJ m 43922.0 0.0   1   0.0 0.0 43922.0, 43922.0 -1.18
AXB8/PgnJ m 92635.0 0.0   1   0.0 0.0 92635.0, 92635.0 0.06
BALB/cJ m 82687.0 8702.0   3 5024.0 0.105 75194.0, 92232.0 -0.2
BTBR T+ Itpr3tf/J m 54599.0 0.0   1   0.0 0.0 54599.0, 54599.0 -0.91
BUB/BnJ m 127866.0 0.0   1   0.0 0.0 127866.0, 127866.0 0.95
BXA11/PgnJ m 149190.0 0.0   1   0.0 0.0 149190.0, 149190.0 1.49
BXA12/PgnJ m 130907.0 0.0   1   0.0 0.0 130907.0, 130907.0 1.03
BXA13/PgnJ m 86648.0 0.0   1   0.0 0.0 86648.0, 86648.0 -0.1
BXA14/PgnJ m 166138.0 0.0   1   0.0 0.0 166138.0, 166138.0 1.92
BXA16/PgnJ m 98813.0 34969.0   2   24727.0 0.354 74086.0, 123540.0 0.21
BXA1/PgnJ m 89591.0 0.0   1   0.0 0.0 89591.0, 89591.0 -0.02
BXA24/PgnJ m 50228.0 0.0   1   0.0 0.0 50228.0, 50228.0 -1.02
BXA25/PgnJ m 48029.0 0.0   1   0.0 0.0 48029.0, 48029.0 -1.07
BXA26/PgnJ m 65726.0 0.0   1   0.0 0.0 65726.0, 65726.0 -0.63
BXA2/PgnJ m 90531.0 0.0   1   0.0 0.0 90531.0, 90531.0 0.0
BXA4/PgnJ m 108916.0 0.0   1   0.0 0.0 108916.0, 108916.0 0.47
BXA7/PgnJ m 96475.0 0.0   1   0.0 0.0 96475.0, 96475.0 0.15
BXA8/PgnJ m 36925.0 0.0   1   0.0 0.0 36925.0, 36925.0 -1.36
BXD11/TyJ m 84141.0 0.0   1   0.0 0.0 84141.0, 84141.0 -0.16
BXD12/TyJ m 82231.0 0.0   1   0.0 0.0 82231.0, 82231.0 -0.21
BXD13/TyJ m 46779.0 0.0   1   0.0 0.0 46779.0, 46779.0 -1.11
BXD14/TyJ m 68867.0 0.0   1   0.0 0.0 68867.0, 68867.0 -0.55
BXD15/TyJ m 94874.0 0.0   1   0.0 0.0 94874.0, 94874.0 0.11
BXD18/TyJ m 95408.0 0.0   1   0.0 0.0 95408.0, 95408.0 0.13
BXD19/TyJ m 75394.0 25788.0   2   18235.0 0.342 57160.0, 93629.0 -0.38
BXD1/TyJ m 75830.0 0.0   1   0.0 0.0 75830.0, 75830.0 -0.37
BXD20/TyJ m 72928.0 0.0   1   0.0 0.0 72928.0, 72928.0 -0.44
BXD21/TyJ m 132636.0 0.0   1   0.0 0.0 132636.0, 132636.0 1.07
BXD22/TyJ m 69768.0 0.0   1   0.0 0.0 69768.0, 69768.0 -0.52
BXD24/TyJ m 70743.0 0.0   1   0.0 0.0 70743.0, 70743.0 -0.5
BXD24/TyJ-Cep290rd16/J m 67775.0 0.0   1   0.0 0.0 67775.0, 67775.0 -0.57
BXD28/TyJ m 56874.0 0.0   1   0.0 0.0 56874.0, 56874.0 -0.85
BXD29-Tlr4lps-2J/J m 88156.0 0.0   1   0.0 0.0 88156.0, 88156.0 -0.06
BXD2/TyJ m 98402.0 0.0   1   0.0 0.0 98402.0, 98402.0 0.2
BXD32/TyJ m 100320.0 0.0   1   0.0 0.0 100320.0, 100320.0 0.25
BXD33/TyJ m 57661.0 0.0   1   0.0 0.0 57661.0, 57661.0 -0.83
BXD34/TyJ m 103605.0 0.0   1   0.0 0.0 103605.0, 103605.0 0.33
BXD36/TyJ m 54409.0 0.0   1   0.0 0.0 54409.0, 54409.0 -0.91
BXD38/TyJ m 119152.0 0.0   1   0.0 0.0 119152.0, 119152.0 0.73
BXD39/TyJ m 90566.0 0.0   1   0.0 0.0 90566.0, 90566.0 0.0
BXD40/TyJ m 84776.0 0.0   1   0.0 0.0 84776.0, 84776.0 -0.14
BXD42/TyJ m 73626.0 0.0   1   0.0 0.0 73626.0, 73626.0 -0.43
BXD5/TyJ m 109751.0 0.0   1   0.0 0.0 109751.0, 109751.0 0.49
BXD6/TyJ m 53590.0 0.0   1   0.0 0.0 53590.0, 53590.0 -0.93
BXD8/TyJ m 87677.0 0.0   1   0.0 0.0 87677.0, 87677.0 -0.07
BXD9/TyJ m 69333.0 0.0   1   0.0 0.0 69333.0, 69333.0 -0.53
BXH10/TyJ m 94944.0 0.0   1   0.0 0.0 94944.0, 94944.0 0.11
BXH19/TyJ m 91671.0 0.0   1   0.0 0.0 91671.0, 91671.0 0.03
BXH20/KccJ m 101590.0 0.0   1   0.0 0.0 101590.0, 101590.0 0.28
BXH22/KccJ m 74397.0 0.0   1   0.0 0.0 74397.0, 74397.0 -0.41
BXH2/TyJ m 53754.0 0.0   1   0.0 0.0 53754.0, 53754.0 -0.93
BXH4/TyJ m 113604.0 38796.0   2   27433.0 0.342 86171.0, 141037.0 0.59
BXH6/TyJ m 124678.0 0.0   1   0.0 0.0 124678.0, 124678.0 0.87
BXH7/TyJ m 89553.0 0.0   1   0.0 0.0 89553.0, 89553.0 -0.02
BXH8/TyJ m 87014.0 0.0   1   0.0 0.0 87014.0, 87014.0 -0.09
BXH9/TyJ m 83506.0 0.0   1   0.0 0.0 83506.0, 83506.0 -0.18
C3H/HeJ m 73219.0 9899.0   2   6999.0 0.135 66220.0, 80219.0 -0.44
C57BL/6J m 107397.0 27417.0   5 12261.0 0.255 85528.0, 147041.0 0.43
C57L/J m 166812.0 0.0   1   0.0 0.0 166812.0, 166812.0 1.94
C58/J m 81634.0 0.0   1   0.0 0.0 81634.0, 81634.0 -0.22
CAST/EiJ m 175239.0 0.0   1   0.0 0.0 175239.0, 175239.0 2.15
CBA/J m 27965.0 0.0   1   0.0 0.0 27965.0, 27965.0 -1.58
CE/J m 67690.0 0.0   1   0.0 0.0 67690.0, 67690.0 -0.58
CXB11/HiAJ m 57334.0 47630.0   2   33679.0 0.831 23654.0, 91013.0 -0.84
CXB12/HiAJ m 81846.0 3245.0   2   2294.0 0.0396 79552.0, 84141.0 -0.22
CXB13/HiAJ m 61848.0 17552.0   3 10134.0 0.284 51327.0, 82111.0 -0.72
CXB1/ByJ m 53480.0 7343.0   3 4240.0 0.137 49150.0, 61959.0 -0.94
CXB2/ByJ m 118095.0 34354.0   3 19834.0 0.291 85892.0, 154257.0 0.7
CXB3/ByJ m 78753.0 5961.0   2   4215.0 0.0757 74538.0, 82968.0 -0.3
CXB4/ByJ m 66363.0 7541.0   2   5332.0 0.114 61031.0, 71695.0 -0.61
CXB6/ByJ m 64744.0 11400.0   3 6582.0 0.176 53902.0, 76630.0 -0.65
CXB7/ByJ m 46445.0 10582.0   2   7482.0 0.228 38962.0, 53927.0 -1.11
CXB8/HiAJ m 94314.0 14194.0   3 8195.0 0.15 79790.0, 108153.0 0.1
CXB9/HiAJ m 56562.0 12935.0   3 7468.0 0.229 41736.0, 65538.0 -0.86
DBA/2J m 60638.0 7760.0   4 3880.0 0.128 52989.0, 71205.0 -0.75
FVB/NJ m 86353.0 0.0   1   0.0 0.0 86353.0, 86353.0 -0.1
I/LnJ m 110568.0 0.0   1   0.0 0.0 110568.0, 110568.0 0.51
LG/J m 64219.0 0.0   1   0.0 0.0 64219.0, 64219.0 -0.66
LP/J m 56690.0 0.0   1   0.0 0.0 56690.0, 56690.0 -0.86
NOD/ShiLtJ m 93731.0 0.0   1   0.0 0.0 93731.0, 93731.0 0.08
NON/ShiLtJ m 132513.0 0.0   1   0.0 0.0 132513.0, 132513.0 1.07
NZW/LacJ m 55480.0 0.0   1   0.0 0.0 55480.0, 55480.0 -0.89
PL/J m 84834.0 0.0   1   0.0 0.0 84834.0, 84834.0 -0.14
RIIIS/J m 38161.0 0.0   1   0.0 0.0 38161.0, 38161.0 -1.32
SEA/GnJ m 29240.0 0.0   1   0.0 0.0 29240.0, 29240.0 -1.55
SJL/J m 93254.0 0.0   1   0.0 0.0 93254.0, 93254.0 0.07
SM/J m 105803.0 0.0   1   0.0 0.0 105803.0, 105803.0 0.39
SWR/J m 70002.0 0.0   1   0.0 0.0 70002.0, 70002.0 -0.52


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 73028.0 17285.928 108196.485 37859.515
AXB19b/PgnJ m 175280.65 17285.928 210449.135 140112.165
AXB24/PgnJ m 180758.4 17285.928 215926.885 145589.915
BALB/cJ m 82687.4333 14113.9011 111402.3811 53972.4856
BXA16/PgnJ m 98812.9 17285.928 133981.385 63644.415
BXD19/TyJ m 75394.3 17285.928 110562.785 40225.815
BXH4/TyJ m 113603.9 17285.928 148772.385 78435.415
C3H/HeJ m 73219.25 17285.928 108387.735 38050.765
C57BL/6J m 107397.12 10932.5808 129639.6229 85154.6171
CXB11/HiAJ m 57333.5 17285.928 92501.985 22165.015
CXB12/HiAJ m 81846.5 17285.928 117014.985 46678.015
CXB13/HiAJ m 61848.2667 14113.9011 90563.2144 33133.3189
CXB1/ByJ m 53480.3667 14113.9011 82195.3144 24765.4189
CXB2/ByJ m 118094.8667 14113.9011 146809.8144 89379.9189
CXB3/ByJ m 78753.4 17285.928 113921.885 43584.915
CXB4/ByJ m 66362.9 17285.928 101531.385 31194.415
CXB6/ByJ m 64743.6 14113.9011 93458.5477 36028.6523
CXB7/ByJ m 46444.8 17285.928 81613.285 11276.315
CXB8/HiAJ m 94313.5333 14113.9011 123028.4811 65598.5856
CXB9/HiAJ m 56562.2667 14113.9011 85277.2144 27847.3189
DBA/2J m 60638.225 12222.9969 85506.0992 35770.3508




  GWAS USING LINEAR MIXED MODELS