Project measure / variable:   HMDPpheno6   spermidine

ID, description, units MPD:50151   spermidine   liver spermidine (16h fast), relative abundance    
Data set, strains HMDPpheno6   HMDP w/par   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno6 - liver spermidine (16h fast), relative abundance

BXD9/TyJBXA14/PgnJAXB1/PgnJBXA13/PgnJBXH19/TyJBXD20/TyJAXB19/PgnJBXD24/TyJ-Cep290<rd16>/JBXH10/TyJCAST/EiJAXB24/PgnJBXD42/TyJC58/JBXD5/TyJBXD2/TyJAXB5/PgnJBXD8/TyJBXA25/PgnJBXD38/TyJBXD12/TyJBXH7/TyJBXD6/TyJAXB19b/PgnJBXD39/TyJBXH4/TyJAXB19a/PgnJBXD29-Tlr4<lps-2J>/JBXD1/TyJBXD24/TyJBXA24/PgnJAXB4/PgnJBXH8/TyJBXH22/KccJBXD21/TyJBXD33/TyJBXD14/TyJCXB11/HiAJBXH2/TyJAXB12/PgnJDBA/2JBXD18/TyJBXA4/PgnJBXA16/PgnJBXA26/PgnJBXA11/PgnJBXA8/PgnJBXH20/KccJBXD22/TyJBXH6/TyJBXD19/TyJC57BL/6JCXB13/HiAJA/JAXB8/PgnJBXD34/TyJRIIIS/JBXD36/TyJBXA1/PgnJBTBR T<+> Itpr3<tf>/JBXD32/TyJBXD15/TyJBXA12/PgnJAXB15/PgnJBXA7/PgnJFVB/NJCXB1/ByJBXD40/TyJBXD13/TyJBXD11/TyJSJL/JCXB6/ByJC3H/HeJCXB8/HiAJAXB2/PgnJCXB2/ByJCXB3/ByJCXB4/ByJLG/JKK/HlJBXH9/TyJAXB13/PgnJAXB10/PgnJCXB9/HiAJSEA/GnJBXD28/TyJAXB23/PgnJSWR/JAXB6/PgnJNZW/LacJSM/JBXA2/PgnJCXB12/HiAJPL/JCXB7/ByJC57L/JBALB/cJLP/JNON/ShiLtJI/LnJ129X1/SvJBUB/BnJAKR/JNOD/ShiLtJCBA/JCE/JMA/MyJ (no units) 100,000200,000300,000400,000500,000600,000700,000800,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means327171   None
Median of the strain means297168   None
SD of the strain means± 152357
Coefficient of variation (CV)0.466
Min–max range of strain means96023   –   846375   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 408666197242.343 19460295106.7782 2.1778 0.0211
Residuals 34 303822105022.978 8935944265.3817


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 158879.0 0.0   1   0.0 0.0 158879.0, 158879.0 -1.1
A/J m 297169.0 125728.0   2   88903.0 0.423 208266.0, 386072.0 -0.2
AKR/J m 143766.0 0.0   1   0.0 0.0 143766.0, 143766.0 -1.2
AXB10/PgnJ m 204843.0 0.0   1   0.0 0.0 204843.0, 204843.0 -0.8
AXB12/PgnJ m 342054.0 0.0   1   0.0 0.0 342054.0, 342054.0 0.1
AXB13/PgnJ m 207586.0 0.0   1   0.0 0.0 207586.0, 207586.0 -0.78
AXB15/PgnJ m 273290.0 0.0   1   0.0 0.0 273290.0, 273290.0 -0.35
AXB19a/PgnJ m 407608.0 0.0   1   0.0 0.0 407608.0, 407608.0 0.53
AXB19b/PgnJ m 413258.0 233312.0   2   164976.0 0.565 248282.0, 578235.0 0.57
AXB19/PgnJ m 594966.0 0.0   1   0.0 0.0 594966.0, 594966.0 1.76
AXB1/PgnJ m 668409.0 0.0   1   0.0 0.0 668409.0, 668409.0 2.24
AXB23/PgnJ m 192517.0 0.0   1   0.0 0.0 192517.0, 192517.0 -0.88
AXB24/PgnJ m 549264.0 11050.0   2   7814.0 0.0201 541450.0, 557078.0 1.46
AXB2/PgnJ m 228989.0 0.0   1   0.0 0.0 228989.0, 228989.0 -0.64
AXB4/PgnJ m 379980.0 0.0   1   0.0 0.0 379980.0, 379980.0 0.35
AXB5/PgnJ m 510164.0 0.0   1   0.0 0.0 510164.0, 510164.0 1.2
AXB6/PgnJ m 192232.0 0.0   1   0.0 0.0 192232.0, 192232.0 -0.89
AXB8/PgnJ m 297168.0 0.0   1   0.0 0.0 297168.0, 297168.0 -0.2
BALB/cJ m 167094.0 22360.0   3 12910.0 0.134 142128.0, 185279.0 -1.05
BTBR T+ Itpr3tf/J m 277785.0 0.0   1   0.0 0.0 277785.0, 277785.0 -0.32
BUB/BnJ m 145654.0 0.0   1   0.0 0.0 145654.0, 145654.0 -1.19
BXA11/PgnJ m 319239.0 0.0   1   0.0 0.0 319239.0, 319239.0 -0.05
BXA12/PgnJ m 274002.0 0.0   1   0.0 0.0 274002.0, 274002.0 -0.35
BXA13/PgnJ m 663486.0 0.0   1   0.0 0.0 663486.0, 663486.0 2.21
BXA14/PgnJ m 807299.0 0.0   1   0.0 0.0 807299.0, 807299.0 3.15
BXA16/PgnJ m 331112.0 93391.0   2   66037.0 0.282 265075.0, 397150.0 0.03
BXA1/PgnJ m 283804.0 0.0   1   0.0 0.0 283804.0, 283804.0 -0.28
BXA24/PgnJ m 389908.0 0.0   1   0.0 0.0 389908.0, 389908.0 0.41
BXA25/PgnJ m 505050.0 0.0   1   0.0 0.0 505050.0, 505050.0 1.17
BXA26/PgnJ m 328371.0 0.0   1   0.0 0.0 328371.0, 328371.0 0.01
BXA2/PgnJ m 181844.0 0.0   1   0.0 0.0 181844.0, 181844.0 -0.95
BXA4/PgnJ m 337045.0 0.0   1   0.0 0.0 337045.0, 337045.0 0.06
BXA7/PgnJ m 261949.0 0.0   1   0.0 0.0 261949.0, 261949.0 -0.43
BXA8/PgnJ m 316410.0 0.0   1   0.0 0.0 316410.0, 316410.0 -0.07
BXD11/TyJ m 241950.0 0.0   1   0.0 0.0 241950.0, 241950.0 -0.56
BXD12/TyJ m 475317.0 0.0   1   0.0 0.0 475317.0, 475317.0 0.97
BXD13/TyJ m 242300.0 0.0   1   0.0 0.0 242300.0, 242300.0 -0.56
BXD14/TyJ m 357661.0 0.0   1   0.0 0.0 357661.0, 357661.0 0.2
BXD15/TyJ m 275504.0 0.0   1   0.0 0.0 275504.0, 275504.0 -0.34
BXD18/TyJ m 337213.0 0.0   1   0.0 0.0 337213.0, 337213.0 0.07
BXD19/TyJ m 304104.0 15000.0   2   10607.0 0.0493 293497.0, 314710.0 -0.15
BXD1/TyJ m 403825.0 0.0   1   0.0 0.0 403825.0, 403825.0 0.5
BXD20/TyJ m 605285.0 0.0   1   0.0 0.0 605285.0, 605285.0 1.83
BXD21/TyJ m 360993.0 0.0   1   0.0 0.0 360993.0, 360993.0 0.22
BXD22/TyJ m 306910.0 0.0   1   0.0 0.0 306910.0, 306910.0 -0.13
BXD24/TyJ m 391416.0 0.0   1   0.0 0.0 391416.0, 391416.0 0.42
BXD24/TyJ-Cep290rd16/J m 591398.0 0.0   1   0.0 0.0 591398.0, 591398.0 1.73
BXD28/TyJ m 194065.0 61360.0   2   43388.0 0.316 150677.0, 237454.0 -0.87
BXD29-Tlr4lps-2J/J m 404014.0 0.0   1   0.0 0.0 404014.0, 404014.0 0.5
BXD2/TyJ m 518220.0 0.0   1   0.0 0.0 518220.0, 518220.0 1.25
BXD32/TyJ m 275680.0 0.0   1   0.0 0.0 275680.0, 275680.0 -0.34
BXD33/TyJ m 358787.0 0.0   1   0.0 0.0 358787.0, 358787.0 0.21
BXD34/TyJ m 295311.0 0.0   1   0.0 0.0 295311.0, 295311.0 -0.21
BXD36/TyJ m 288214.0 0.0   1   0.0 0.0 288214.0, 288214.0 -0.26
BXD38/TyJ m 496147.0 0.0   1   0.0 0.0 496147.0, 496147.0 1.11
BXD39/TyJ m 411274.0 0.0   1   0.0 0.0 411274.0, 411274.0 0.55
BXD40/TyJ m 247200.0 0.0   1   0.0 0.0 247200.0, 247200.0 -0.52
BXD42/TyJ m 540438.0 0.0   1   0.0 0.0 540438.0, 540438.0 1.4
BXD5/TyJ m 523848.0 0.0   1   0.0 0.0 523848.0, 523848.0 1.29
BXD6/TyJ m 434188.0 0.0   1   0.0 0.0 434188.0, 434188.0 0.7
BXD8/TyJ m 509787.0 0.0   1   0.0 0.0 509787.0, 509787.0 1.2
BXD9/TyJ m 846375.0 0.0   1   0.0 0.0 846375.0, 846375.0 3.41
BXH10/TyJ m 558676.0 0.0   1   0.0 0.0 558676.0, 558676.0 1.52
BXH19/TyJ m 619603.0 0.0   1   0.0 0.0 619603.0, 619603.0 1.92
BXH20/KccJ m 316217.0 0.0   1   0.0 0.0 316217.0, 316217.0 -0.07
BXH22/KccJ m 363405.0 0.0   1   0.0 0.0 363405.0, 363405.0 0.24
BXH2/TyJ m 344336.0 0.0   1   0.0 0.0 344336.0, 344336.0 0.11
BXH4/TyJ m 408433.0 41155.0   2   29101.0 0.101 379332.0, 437534.0 0.53
BXH6/TyJ m 306336.0 0.0   1   0.0 0.0 306336.0, 306336.0 -0.14
BXH7/TyJ m 464161.0 0.0   1   0.0 0.0 464161.0, 464161.0 0.9
BXH8/TyJ m 375893.0 0.0   1   0.0 0.0 375893.0, 375893.0 0.32
BXH9/TyJ m 209934.0 0.0   1   0.0 0.0 209934.0, 209934.0 -0.77
C3H/HeJ m 231045.0 94606.0   2   66896.0 0.409 164149.0, 297941.0 -0.63
C57BL/6J m 300295.0 62363.0   5 27890.0 0.208 226978.0, 395652.0 -0.18
C57L/J m 170289.0 0.0   1   0.0 0.0 170289.0, 170289.0 -1.03
C58/J m 536688.0 0.0   1   0.0 0.0 536688.0, 536688.0 1.38
CAST/EiJ m 555999.0 0.0   1   0.0 0.0 555999.0, 555999.0 1.5
CBA/J m 127461.0 0.0   1   0.0 0.0 127461.0, 127461.0 -1.31
CE/J m 117510.0 0.0   1   0.0 0.0 117510.0, 117510.0 -1.38
CXB11/HiAJ m 352986.0 154886.0   2   109521.0 0.439 243465.0, 462507.0 0.17
CXB12/HiAJ m 177134.0 32706.0   2   23127.0 0.185 154007.0, 200260.0 -0.98
CXB13/HiAJ m 297548.0 65292.0   3 37697.0 0.219 243330.0, 370026.0 -0.19
CXB1/ByJ m 249662.0 116517.0   3 67271.0 0.467 124081.0, 354264.0 -0.51
CXB2/ByJ m 226152.0 69962.0   3 40393.0 0.309 146490.0, 277609.0 -0.66
CXB3/ByJ m 224482.0 55629.0   2   39336.0 0.248 185146.0, 263817.0 -0.67
CXB4/ByJ m 222229.0 5476.0   2   3872.0 0.0246 218357.0, 226101.0 -0.69
CXB6/ByJ m 232190.0 22542.0   3 13015.0 0.0971 213536.0, 257238.0 -0.62
CXB7/ByJ m 172257.0 23724.0   2   16776.0 0.138 155481.0, 189033.0 -1.02
CXB8/HiAJ m 229514.0 62486.0   3 36076.0 0.272 182476.0, 300415.0 -0.64
CXB9/HiAJ m 199427.0 1201.0   3 693.0 0.00602 198090.0, 200413.0 -0.84
DBA/2J m 341664.0 191923.0   4 95961.0 0.562 176628.0, 565820.0 0.1
FVB/NJ m 257098.0 0.0   1   0.0 0.0 257098.0, 257098.0 -0.46
I/LnJ m 161580.0 0.0   1   0.0 0.0 161580.0, 161580.0 -1.09
KK/HlJ m 210409.0 0.0   1   0.0 0.0 210409.0, 210409.0 -0.77
LG/J m 218589.0 0.0   1   0.0 0.0 218589.0, 218589.0 -0.71
LP/J m 163168.0 0.0   1   0.0 0.0 163168.0, 163168.0 -1.08
MA/MyJ m 96023.0 0.0   1   0.0 0.0 96023.0, 96023.0 -1.52
NOD/ShiLtJ m 131112.0 0.0   1   0.0 0.0 131112.0, 131112.0 -1.29
NON/ShiLtJ m 162416.0 0.0   1   0.0 0.0 162416.0, 162416.0 -1.08
NZW/LacJ m 190474.0 0.0   1   0.0 0.0 190474.0, 190474.0 -0.9
PL/J m 174356.0 0.0   1   0.0 0.0 174356.0, 174356.0 -1.0
RIIIS/J m 289472.0 0.0   1   0.0 0.0 289472.0, 289472.0 -0.25
SEA/GnJ m 194221.0 0.0   1   0.0 0.0 194221.0, 194221.0 -0.87
SJL/J m 235255.0 0.0   1   0.0 0.0 235255.0, 235255.0 -0.6
SM/J m 182410.0 0.0   1   0.0 0.0 182410.0, 182410.0 -0.95
SWR/J m 192362.0 0.0   1   0.0 0.0 192362.0, 192362.0 -0.88


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 297169.2 66842.8914 433010.2991 161328.1009
AXB19b/PgnJ m 413258.5 66842.8914 549099.5991 277417.4009
AXB24/PgnJ m 549263.65 66842.8914 685104.7491 413422.5509
BALB/cJ m 167094.3 54576.9923 278008.0929 56180.5071
BXA16/PgnJ m 331112.35 66842.8914 466953.4491 195271.2509
BXD19/TyJ m 304103.5 66842.8914 439944.5991 168262.4009
BXD28/TyJ m 194065.4 66842.8914 329906.4991 58224.3009
BXH4/TyJ m 408433.2 66842.8914 544274.2991 272592.1009
C3H/HeJ m 231044.9 66842.8914 366885.9991 95203.8009
C57BL/6J m 300295.34 42275.1565 386208.7946 214381.8854
CXB11/HiAJ m 352985.95 66842.8914 488827.0491 217144.8509
CXB12/HiAJ m 177133.5 66842.8914 312974.5991 41292.4009
CXB13/HiAJ m 297547.6 54576.9923 408461.3929 186633.8071
CXB1/ByJ m 249662.0667 54576.9923 360575.8596 138748.2737
CXB2/ByJ m 226152.0667 54576.9923 337065.8596 115238.2737
CXB3/ByJ m 224481.65 66842.8914 360322.7491 88640.5509
CXB4/ByJ m 222229.05 66842.8914 358070.1491 86387.9509
CXB6/ByJ m 232190.1667 54576.9923 343103.9596 121276.3737
CXB7/ByJ m 172257.0 66842.8914 308098.0991 36415.9009
CXB8/HiAJ m 229514.1333 54576.9923 340427.9263 118600.3404
CXB9/HiAJ m 199427.3333 54576.9923 310341.1263 88513.5404
DBA/2J m 341664.475 47265.0618 437718.6373 245610.3127




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