Project measure / variable:   HMDPpheno6   phenol_sulfate

ID, description, units MPD:50149   phenol_sulfate   liver phenol sulfate (16h fast), relative abundance    
Data set, strains HMDPpheno6   HMDP w/par   103 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno6 - liver phenol sulfate (16h fast), relative abundance

BXH6/TyJAXB19b/PgnJCXB11/HiAJBXH8/TyJLG/JBXA8/PgnJC3H/HeJBXA7/PgnJBXD2/TyJAXB1/PgnJBXH2/TyJAXB19a/PgnJAXB12/PgnJAKR/JCXB9/HiAJBXD6/TyJCXB12/HiAJKK/HlJCAST/EiJBTBR T<+> Itpr3<tf>/JI/LnJAXB19/PgnJAXB24/PgnJBXA1/PgnJSJL/JBXD5/TyJBALB/cJBXH10/TyJBXA26/PgnJCBA/JBXA12/PgnJAXB5/PgnJBXD29-Tlr4<lps-2J>/JSWR/JBXD39/TyJCXB6/ByJNON/ShiLtJA/JBXD32/TyJBXD24/TyJ-Cep290<rd16>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 (no units) 20,00040,00060,00080,000100,000120,000140,000160,000180,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested103 strains
Mean of the strain means31790   None
Median of the strain means27514   None
SD of the strain means± 21833
Coefficient of variation (CV)0.687
Min–max range of strain means9149   –   169890   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 20 19240187057.3254 962009352.8663 1.0803 0.4112
Residuals 33 29386886067.4096 890511699.0124


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 103 (103)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 12757.0 0.0   1   0.0 0.0 12757.0, 12757.0 -0.87
A/J m 31253.0 6970.0   2   4928.0 0.223 26325.0, 36182.0 -0.02
AKR/J m 46694.0 0.0   1   0.0 0.0 46694.0, 46694.0 0.68
AXB10/PgnJ m 25831.0 0.0   1   0.0 0.0 25831.0, 25831.0 -0.27
AXB12/PgnJ m 48580.0 0.0   1   0.0 0.0 48580.0, 48580.0 0.77
AXB13/PgnJ m 14345.0 0.0   1   0.0 0.0 14345.0, 14345.0 -0.8
AXB19a/PgnJ m 50258.0 0.0   1   0.0 0.0 50258.0, 50258.0 0.85
AXB19b/PgnJ m 100846.0 109599.0   2   77498.0 1.09 23348.0, 178344.0 3.16
AXB19/PgnJ m 39843.0 0.0   1   0.0 0.0 39843.0, 39843.0 0.37
AXB1/PgnJ m 51763.0 0.0   1   0.0 0.0 51763.0, 51763.0 0.91
AXB23/PgnJ m 27992.0 0.0   1   0.0 0.0 27992.0, 27992.0 -0.17
AXB24/PgnJ m 39325.0 9305.0   2   6580.0 0.237 32746.0, 45905.0 0.35
AXB2/PgnJ m 23359.0 0.0   1   0.0 0.0 23359.0, 23359.0 -0.39
AXB4/PgnJ m 28980.0 0.0   1   0.0 0.0 28980.0, 28980.0 -0.13
AXB5/PgnJ m 35035.0 0.0   1   0.0 0.0 35035.0, 35035.0 0.15
AXB8/PgnJ m 19048.0 0.0   1   0.0 0.0 19048.0, 19048.0 -0.58
BALB/cJ m 37794.0 39349.0   3 22718.0 1.04 12468.0, 83126.0 0.28
BTBR T+ Itpr3tf/J m 40706.0 0.0   1   0.0 0.0 40706.0, 40706.0 0.41
BUB/BnJ m 26517.0 0.0   1   0.0 0.0 26517.0, 26517.0 -0.24
BXA11/PgnJ m 15516.0 0.0   1   0.0 0.0 15516.0, 15516.0 -0.75
BXA12/PgnJ m 35091.0 0.0   1   0.0 0.0 35091.0, 35091.0 0.15
BXA13/PgnJ m 24071.0 0.0   1   0.0 0.0 24071.0, 24071.0 -0.35
BXA16/PgnJ m 28006.0 3454.0   2   2442.0 0.123 25563.0, 30448.0 -0.17
BXA1/PgnJ m 38770.0 0.0   1   0.0 0.0 38770.0, 38770.0 0.32
BXA24/PgnJ m 22783.0 0.0   1   0.0 0.0 22783.0, 22783.0 -0.41
BXA25/PgnJ m 19706.0 0.0   1   0.0 0.0 19706.0, 19706.0 -0.55
BXA26/PgnJ m 36249.0 0.0   1   0.0 0.0 36249.0, 36249.0 0.2
BXA2/PgnJ m 24093.0 0.0   1   0.0 0.0 24093.0, 24093.0 -0.35
BXA4/PgnJ m 29546.0 0.0   1   0.0 0.0 29546.0, 29546.0 -0.1
BXA7/PgnJ m 64692.0 0.0   1   0.0 0.0 64692.0, 64692.0 1.51
BXA8/PgnJ m 71250.0 0.0   1   0.0 0.0 71250.0, 71250.0 1.81
BXD11/TyJ m 16774.0 0.0   1   0.0 0.0 16774.0, 16774.0 -0.69
BXD12/TyJ m 10195.0 0.0   1   0.0 0.0 10195.0, 10195.0 -0.99
BXD13/TyJ m 27514.0 0.0   1   0.0 0.0 27514.0, 27514.0 -0.2
BXD14/TyJ m 17725.0 0.0   1   0.0 0.0 17725.0, 17725.0 -0.64
BXD15/TyJ m 11148.0 0.0   1   0.0 0.0 11148.0, 11148.0 -0.95
BXD18/TyJ m 17178.0 0.0   1   0.0 0.0 17178.0, 17178.0 -0.67
BXD19/TyJ m 20514.0 5239.0   2   3704.0 0.255 16810.0, 24218.0 -0.52
BXD1/TyJ m 19023.0 0.0   1   0.0 0.0 19023.0, 19023.0 -0.58
BXD20/TyJ m 27636.0 0.0   1   0.0 0.0 27636.0, 27636.0 -0.19
BXD21/TyJ m 29890.0 0.0   1   0.0 0.0 29890.0, 29890.0 -0.09
BXD22/TyJ m 22449.0 0.0   1   0.0 0.0 22449.0, 22449.0 -0.43
BXD24/TyJ m 19582.0 0.0   1   0.0 0.0 19582.0, 19582.0 -0.56
BXD24/TyJ-Cep290rd16/J m 30431.0 0.0   1   0.0 0.0 30431.0, 30431.0 -0.06
BXD28/TyJ m 25231.0 6549.0   2   4631.0 0.26 20600.0, 29862.0 -0.3
BXD29-Tlr4lps-2J/J m 33416.0 0.0   1   0.0 0.0 33416.0, 33416.0 0.07
BXD2/TyJ m 57281.0 0.0   1   0.0 0.0 57281.0, 57281.0 1.17
BXD32/TyJ m 30716.0 0.0   1   0.0 0.0 30716.0, 30716.0 -0.05
BXD33/TyJ m 20553.0 0.0   1   0.0 0.0 20553.0, 20553.0 -0.51
BXD34/TyJ m 10075.0 0.0   1   0.0 0.0 10075.0, 10075.0 -0.99
BXD36/TyJ m 26977.0 0.0   1   0.0 0.0 26977.0, 26977.0 -0.22
BXD38/TyJ m 15744.0 0.0   1   0.0 0.0 15744.0, 15744.0 -0.73
BXD39/TyJ m 33073.0 0.0   1   0.0 0.0 33073.0, 33073.0 0.06
BXD40/TyJ m 21055.0 0.0   1   0.0 0.0 21055.0, 21055.0 -0.49
BXD42/TyJ m 15402.0 0.0   1   0.0 0.0 15402.0, 15402.0 -0.75
BXD5/TyJ m 38454.0 0.0   1   0.0 0.0 38454.0, 38454.0 0.31
BXD6/TyJ m 45985.0 0.0   1   0.0 0.0 45985.0, 45985.0 0.65
BXD8/TyJ m 15586.0 0.0   1   0.0 0.0 15586.0, 15586.0 -0.74
BXD9/TyJ m 16830.0 0.0   1   0.0 0.0 16830.0, 16830.0 -0.69
BXH10/TyJ m 36876.0 0.0   1   0.0 0.0 36876.0, 36876.0 0.23
BXH19/TyJ m 22189.0 0.0   1   0.0 0.0 22189.0, 22189.0 -0.44
BXH20/KccJ m 19171.0 0.0   1   0.0 0.0 19171.0, 19171.0 -0.58
BXH22/KccJ m 15560.0 0.0   1   0.0 0.0 15560.0, 15560.0 -0.74
BXH2/TyJ m 50955.0 0.0   1   0.0 0.0 50955.0, 50955.0 0.88
BXH4/TyJ m 28110.0 6581.0   2   4654.0 0.234 23457.0, 32764.0 -0.17
BXH6/TyJ m 169890.0 0.0   1   0.0 0.0 169890.0, 169890.0 6.33
BXH7/TyJ m 24473.0 0.0   1   0.0 0.0 24473.0, 24473.0 -0.34
BXH8/TyJ m 79960.0 0.0   1   0.0 0.0 79960.0, 79960.0 2.21
BXH9/TyJ m 20797.0 0.0   1   0.0 0.0 20797.0, 20797.0 -0.5
C3H/HeJ m 66762.0 0.0   1   0.0 0.0 66762.0, 66762.0 1.6
C57BL/6J m 29183.0 7892.0   5 3530.0 0.27 20196.0, 41836.0 -0.12
C57L/J m 10650.0 0.0   1   0.0 0.0 10650.0, 10650.0 -0.97
C58/J m 30362.0 0.0   1   0.0 0.0 30362.0, 30362.0 -0.07
CAST/EiJ m 41636.0 0.0   1   0.0 0.0 41636.0, 41636.0 0.45
CBA/J m 35831.0 0.0   1   0.0 0.0 35831.0, 35831.0 0.19
CE/J m 14722.0 0.0   1   0.0 0.0 14722.0, 14722.0 -0.78
CXB11/HiAJ m 85962.0 107875.0   2   76279.0 1.25 9683.0, 162242.0 2.48
CXB12/HiAJ m 45550.0 6440.0   2   4553.0 0.141 40997.0, 50104.0 0.63
CXB13/HiAJ m 28844.0 3950.0   3 2281.0 0.137 25789.0, 33305.0 -0.13
CXB1/ByJ m 19418.0 8821.0   3 5093.0 0.454 13612.0, 29569.0 -0.57
CXB2/ByJ m 12827.0 2960.0   3 1709.0 0.231 9552.0, 15313.0 -0.87
CXB3/ByJ m 22186.0 6776.0   2   4791.0 0.305 17395.0, 26977.0 -0.44
CXB4/ByJ m 26664.0 10586.0   2   7485.0 0.397 19178.0, 34149.0 -0.23
CXB6/ByJ m 31914.0 15485.0   3 8940.0 0.485 18685.0, 48947.0 0.01
CXB7/ByJ m 22166.0 18467.0   2   13058.0 0.833 9108.0, 35224.0 -0.44
CXB8/HiAJ m 28123.0 3232.0   3 1866.0 0.115 24424.0, 30399.0 -0.17
CXB9/HiAJ m 46688.0 15192.0   3 8771.0 0.325 32587.0, 62776.0 0.68
DBA/2J m 23616.0 11895.0   4 5948.0 0.504 13587.0, 38369.0 -0.37
FVB/NJ m 9149.0 0.0   1   0.0 0.0 9149.0, 9149.0 -1.04
I/LnJ m 40388.0 0.0   1   0.0 0.0 40388.0, 40388.0 0.39
KK/HlJ m 44077.0 0.0   1   0.0 0.0 44077.0, 44077.0 0.56
LG/J m 71466.0 0.0   1   0.0 0.0 71466.0, 71466.0 1.82
LP/J m 10979.0 0.0   1   0.0 0.0 10979.0, 10979.0 -0.95
MA/MyJ m 13168.0 0.0   1   0.0 0.0 13168.0, 13168.0 -0.85
NOD/ShiLtJ m 16778.0 0.0   1   0.0 0.0 16778.0, 16778.0 -0.69
NON/ShiLtJ m 31873.0 0.0   1   0.0 0.0 31873.0, 31873.0 0.0
NZW/LacJ m 21983.0 0.0   1   0.0 0.0 21983.0, 21983.0 -0.45
PL/J m 14504.0 0.0   1   0.0 0.0 14504.0, 14504.0 -0.79
RIIIS/J m 22500.0 0.0   1   0.0 0.0 22500.0, 22500.0 -0.43
SEA/GnJ m 11618.0 0.0   1   0.0 0.0 11618.0, 11618.0 -0.92
SJL/J m 38602.0 0.0   1   0.0 0.0 38602.0, 38602.0 0.31
SM/J m 15923.0 0.0   1   0.0 0.0 15923.0, 15923.0 -0.73
SWR/J m 33136.0 0.0   1   0.0 0.0 33136.0, 33136.0 0.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 31253.3 21101.0865 74183.7832 0.0
AXB19b/PgnJ m 100846.0 21101.0865 143776.4832 57915.5168
AXB24/PgnJ m 39325.25 21101.0865 82255.7332 0.0
BALB/cJ m 37794.4667 17228.9649 72847.0594 2741.8739
BXA16/PgnJ m 28005.7 21101.0865 70936.1832 0.0
BXD19/TyJ m 20514.0 21101.0865 63444.4832 0.0
BXD28/TyJ m 25231.0 21101.0865 68161.4832 0.0
BXH4/TyJ m 28110.45 21101.0865 71040.9332 0.0
C57BL/6J m 29182.86 13345.4989 56334.4816 2031.2384
CXB11/HiAJ m 85962.15 21101.0865 128892.6332 43031.6668
CXB12/HiAJ m 45550.35 21101.0865 88480.8332 2619.8668
CXB13/HiAJ m 28844.1 17228.9649 63896.6927 0.0
CXB1/ByJ m 19418.4333 17228.9649 54471.0261 0.0
CXB2/ByJ m 12827.0667 17228.9649 47879.6594 0.0
CXB3/ByJ m 22186.25 21101.0865 65116.7332 0.0
CXB4/ByJ m 26663.55 21101.0865 69594.0332 0.0
CXB6/ByJ m 31914.1 17228.9649 66966.6927 0.0
CXB7/ByJ m 22166.0 21101.0865 65096.4832 0.0
CXB8/HiAJ m 28123.4 17228.9649 63175.9927 0.0
CXB9/HiAJ m 46688.4 17228.9649 81740.9927 11635.8073
DBA/2J m 23615.775 14920.7213 53972.2108 0.0




  GWAS USING LINEAR MIXED MODELS

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