Project measure / variable:   HMDPpheno6   aminoadipate

ID, description, units MPD:50141   aminoadipate   liver 2-aminoadipate (16h fast), relative abundance    
Data set, strains HMDPpheno6   HMDP w/par   98 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno6 - liver 2-aminoadipate (16h fast), relative abundance

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-Cep290<rd16>/JBXD40/TyJBXA1/PgnJCBA/JCAST/EiJBXH4/TyJBTBR T<+> Itpr3<tf>/JBXD9/TyJ (no units) 05,000,00010,000,00015,000,00020,000,00025,000,00030,000,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested98 strains
Mean of the strain means1323789   None
Median of the strain means290463   None
SD of the strain means± 4617011
Coefficient of variation (CV)3.49
Min–max range of strain means17357   –   30489014   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 19 115007031636882.0 6053001665099.07 7.7743 < 0.0001
Residuals 30 23357781133828.3 778592704460.944


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 98 (98)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 161393.0 0.0   1   0.0 0.0 161393.0, 161393.0 -0.25
A/J m 607713.0 544537.0   2   385046.0 0.896 222666.0, 992759.0 -0.16
AKR/J m 433756.0 0.0   1   0.0 0.0 433756.0, 433756.0 -0.19
AXB10/PgnJ m 200837.0 0.0   1   0.0 0.0 200837.0, 200837.0 -0.24
AXB12/PgnJ m 912476.0 0.0   1   0.0 0.0 912476.0, 912476.0 -0.09
AXB13/PgnJ m 173672.0 0.0   1   0.0 0.0 173672.0, 173672.0 -0.25
AXB15/PgnJ m 170199.0 0.0   1   0.0 0.0 170199.0, 170199.0 -0.25
AXB19a/PgnJ m 387152.0 0.0   1   0.0 0.0 387152.0, 387152.0 -0.2
AXB19b/PgnJ m 332224.0 57529.0   2   40679.0 0.173 291546.0, 372903.0 -0.21
AXB19/PgnJ m 217869.0 0.0   1   0.0 0.0 217869.0, 217869.0 -0.24
AXB1/PgnJ m 27039106.0 0.0   1   0.0 0.0 27039106.0, 27039106.0 5.57
AXB23/PgnJ m 158065.0 0.0   1   0.0 0.0 158065.0, 158065.0 -0.25
AXB24/PgnJ m 634058.0 559068.0   2   395321.0 0.882 238737.0, 1029379.0 -0.15
AXB2/PgnJ m 8304871.0 0.0   1   0.0 0.0 8304871.0, 8304871.0 1.51
AXB4/PgnJ m 2313981.0 0.0   1   0.0 0.0 2313981.0, 2313981.0 0.21
AXB5/PgnJ m 416202.0 0.0   1   0.0 0.0 416202.0, 416202.0 -0.2
AXB6/PgnJ m 241242.0 0.0   1   0.0 0.0 241242.0, 241242.0 -0.23
AXB8/PgnJ m 412991.0 0.0   1   0.0 0.0 412991.0, 412991.0 -0.2
BALB/cJ m 380444.0 54987.0   3 31747.0 0.145 329652.0, 438836.0 -0.2
BTBR T+ Itpr3tf/J m 73007.0 0.0   1   0.0 0.0 73007.0, 73007.0 -0.27
BUB/BnJ m 789260.0 0.0   1   0.0 0.0 789260.0, 789260.0 -0.12
BXA12/PgnJ m 983385.0 0.0   1   0.0 0.0 983385.0, 983385.0 -0.07
BXA13/PgnJ m 290463.0 0.0   1   0.0 0.0 290463.0, 290463.0 -0.22
BXA14/PgnJ m 607104.0 0.0   1   0.0 0.0 607104.0, 607104.0 -0.16
BXA16/PgnJ m 769489.0 573123.0   2   405259.0 0.745 364230.0, 1174748.0 -0.12
BXA1/PgnJ m 121640.0 0.0   1   0.0 0.0 121640.0, 121640.0 -0.26
BXA24/PgnJ m 331259.0 0.0   1   0.0 0.0 331259.0, 331259.0 -0.21
BXA25/PgnJ m 247128.0 0.0   1   0.0 0.0 247128.0, 247128.0 -0.23
BXA26/PgnJ m 581854.0 0.0   1   0.0 0.0 581854.0, 581854.0 -0.16
BXA2/PgnJ m 450095.0 0.0   1   0.0 0.0 450095.0, 450095.0 -0.19
BXA4/PgnJ m 264774.0 0.0   1   0.0 0.0 264774.0, 264774.0 -0.23
BXA7/PgnJ m 320822.0 0.0   1   0.0 0.0 320822.0, 320822.0 -0.22
BXA8/PgnJ m 141456.0 0.0   1   0.0 0.0 141456.0, 141456.0 -0.26
BXD11/TyJ m 890459.0 0.0   1   0.0 0.0 890459.0, 890459.0 -0.09
BXD12/TyJ m 309166.0 0.0   1   0.0 0.0 309166.0, 309166.0 -0.22
BXD13/TyJ m 195182.0 0.0   1   0.0 0.0 195182.0, 195182.0 -0.24
BXD14/TyJ m 397265.0 0.0   1   0.0 0.0 397265.0, 397265.0 -0.2
BXD15/TyJ m 290463.0 0.0   1   0.0 0.0 290463.0, 290463.0 -0.22
BXD18/TyJ m 270341.0 0.0   1   0.0 0.0 270341.0, 270341.0 -0.23
BXD19/TyJ m 215287.0 63209.0   2   44696.0 0.294 170591.0, 259983.0 -0.24
BXD20/TyJ m 1024659.0 0.0   1   0.0 0.0 1024659.0, 1024659.0 -0.06
BXD22/TyJ m 252131.0 0.0   1   0.0 0.0 252131.0, 252131.0 -0.23
BXD24/TyJ m 173554.0 0.0   1   0.0 0.0 173554.0, 173554.0 -0.25
BXD24/TyJ-Cep290rd16/J m 125131.0 0.0   1   0.0 0.0 125131.0, 125131.0 -0.26
BXD28/TyJ m 256827.0 29321.0   2   20733.0 0.114 236094.0, 277560.0 -0.23
BXD2/TyJ m 371011.0 0.0   1   0.0 0.0 371011.0, 371011.0 -0.21
BXD32/TyJ m 1816237.0 0.0   1   0.0 0.0 1816237.0, 1816237.0 0.11
BXD33/TyJ m 606226.0 0.0   1   0.0 0.0 606226.0, 606226.0 -0.16
BXD34/TyJ m 398790.0 0.0   1   0.0 0.0 398790.0, 398790.0 -0.2
BXD36/TyJ m 160530.0 0.0   1   0.0 0.0 160530.0, 160530.0 -0.25
BXD38/TyJ m 369702.0 0.0   1   0.0 0.0 369702.0, 369702.0 -0.21
BXD39/TyJ m 138143.0 0.0   1   0.0 0.0 138143.0, 138143.0 -0.26
BXD40/TyJ m 122530.0 0.0   1   0.0 0.0 122530.0, 122530.0 -0.26
BXD5/TyJ m 163498.0 0.0   1   0.0 0.0 163498.0, 163498.0 -0.25
BXD6/TyJ m 523598.0 0.0   1   0.0 0.0 523598.0, 523598.0 -0.17
BXD8/TyJ m 2162368.0 0.0   1   0.0 0.0 2162368.0, 2162368.0 0.18
BXD9/TyJ m 17357.0 0.0   1   0.0 0.0 17357.0, 17357.0 -0.28
BXH10/TyJ m 326046.0 0.0   1   0.0 0.0 326046.0, 326046.0 -0.22
BXH19/TyJ m 155337.0 0.0   1   0.0 0.0 155337.0, 155337.0 -0.25
BXH20/KccJ m 169738.0 0.0   1   0.0 0.0 169738.0, 169738.0 -0.25
BXH22/KccJ m 160997.0 0.0   1   0.0 0.0 160997.0, 160997.0 -0.25
BXH4/TyJ m 97252.0 0.0   1   0.0 0.0 97252.0, 97252.0 -0.27
BXH7/TyJ m 289381.0 0.0   1   0.0 0.0 289381.0, 289381.0 -0.22
BXH8/TyJ m 356325.0 0.0   1   0.0 0.0 356325.0, 356325.0 -0.21
BXH9/TyJ m 270113.0 0.0   1   0.0 0.0 270113.0, 270113.0 -0.23
C3H/HeJ m 165178.0 78452.0   2   55474.0 0.475 109704.0, 220652.0 -0.25
C57BL/6J m 5368534.0 2345014.0   5 1048722.0 0.437 2800487.0, 8575854.0 0.88
C57L/J m 1259241.0 0.0   1   0.0 0.0 1259241.0, 1259241.0 -0.01
C58/J m 30489014.0 0.0   1   0.0 0.0 30489014.0, 30489014.0 6.32
CAST/EiJ m 101649.0 0.0   1   0.0 0.0 101649.0, 101649.0 -0.26
CBA/J m 105435.0 0.0   1   0.0 0.0 105435.0, 105435.0 -0.26
CE/J m 408601.0 0.0   1   0.0 0.0 408601.0, 408601.0 -0.2
CXB11/HiAJ m 165931.0 43063.0   2   30450.0 0.26 135481.0, 196381.0 -0.25
CXB12/HiAJ m 206951.0 118104.0   2   83512.0 0.571 123438.0, 290463.0 -0.24
CXB13/HiAJ m 317381.0 146992.0   3 84866.0 0.463 182725.0, 474193.0 -0.22
CXB1/ByJ m 208646.0 115221.0   3 66523.0 0.552 75680.0, 279120.0 -0.24
CXB2/ByJ m 567696.0 324468.0   3 187331.0 0.572 356506.0, 941299.0 -0.16
CXB3/ByJ m 288376.0 24360.0   2   17225.0 0.0845 271151.0, 305601.0 -0.22
CXB4/ByJ m 174419.0 1945.0   2   1375.0 0.0112 173044.0, 175794.0 -0.25
CXB6/ByJ m 725998.0 216289.0   3 124874.0 0.298 553379.0, 968617.0 -0.13
CXB7/ByJ m 206631.0 87634.0   2   61966.0 0.424 144665.0, 268597.0 -0.24
CXB8/HiAJ m 159925.0 3960.0   3 2286.0 0.0248 155388.0, 162687.0 -0.25
CXB9/HiAJ m 238992.0 52485.0   3 30302.0 0.22 185548.0, 290463.0 -0.23
FVB/NJ m 544873.0 0.0   1   0.0 0.0 544873.0, 544873.0 -0.17
I/LnJ m 223779.0 0.0   1   0.0 0.0 223779.0, 223779.0 -0.24
KK/HlJ m 304590.0 0.0   1   0.0 0.0 304590.0, 304590.0 -0.22
LG/J m 138136.0 0.0   1   0.0 0.0 138136.0, 138136.0 -0.26
LP/J m 180161.0 0.0   1   0.0 0.0 180161.0, 180161.0 -0.25
MA/MyJ m 467128.0 0.0   1   0.0 0.0 467128.0, 467128.0 -0.19
NOD/ShiLtJ m 811858.0 0.0   1   0.0 0.0 811858.0, 811858.0 -0.11
NON/ShiLtJ m 493793.0 0.0   1   0.0 0.0 493793.0, 493793.0 -0.18
NZW/LacJ m 148928.0 0.0   1   0.0 0.0 148928.0, 148928.0 -0.25
PL/J m 224193.0 0.0   1   0.0 0.0 224193.0, 224193.0 -0.24
RIIIS/J m 374335.0 0.0   1   0.0 0.0 374335.0, 374335.0 -0.21
SEA/GnJ m 186101.0 0.0   1   0.0 0.0 186101.0, 186101.0 -0.25
SJL/J m 263038.0 0.0   1   0.0 0.0 263038.0, 263038.0 -0.23
SM/J m 21258904.0 0.0   1   0.0 0.0 21258904.0, 21258904.0 4.32
SWR/J m 407238.0 0.0   1   0.0 0.0 407238.0, 407238.0 -0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 607712.65 623936.1764 1881960.3176 0.0
AXB19b/PgnJ m 332224.45 623936.1764 1606472.1176 0.0
AXB24/PgnJ m 634058.05 623936.1764 1908305.7176 0.0
BALB/cJ m 380444.3333 509441.7548 1420863.1972 0.0
BXA16/PgnJ m 769489.45 623936.1764 2043737.1176 0.0
BXD19/TyJ m 215286.95 623936.1764 1489534.6176 0.0
BXD28/TyJ m 256827.35 623936.1764 1531075.0176 0.0
C3H/HeJ m 165178.05 623936.1764 1439425.7176 0.0
C57BL/6J m 5368534.36 394611.8864 6174439.3465 4562629.3735
CXB11/HiAJ m 165931.1 623936.1764 1440178.7676 0.0
CXB12/HiAJ m 206950.75 623936.1764 1481198.4176 0.0
CXB13/HiAJ m 317381.1333 509441.7548 1357799.9972 0.0
CXB1/ByJ m 208646.2667 509441.7548 1249065.1305 0.0
CXB2/ByJ m 567695.9333 509441.7548 1608114.7972 0.0
CXB3/ByJ m 288376.1 623936.1764 1562623.7676 0.0
CXB4/ByJ m 174419.2 623936.1764 1448666.8676 0.0
CXB6/ByJ m 725998.0 509441.7548 1766416.8638 0.0
CXB7/ByJ m 206631.0 623936.1764 1480878.6676 0.0
CXB8/HiAJ m 159925.0667 509441.7548 1200343.9305 0.0
CXB9/HiAJ m 238991.6667 509441.7548 1279410.5305 0.0




  GWAS USING LINEAR MIXED MODELS

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