Project measure / variable:   HMDPpheno6   glutarate

ID, description, units MPD:50139   glutarate   liver glutarate (pentanedioate) (16h fast), relative abundance    
Data set, strains HMDPpheno6   HMDP w/par   100 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno6 - liver glutarate (pentanedioate) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested100 strains
Mean of the strain means65017   None
Median of the strain means30626   None
SD of the strain means± 201336
Coefficient of variation (CV)3.10
Min–max range of strain means11365   –   1965139   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 19 8121755506.7692 427460816.1457 1.0039 0.4839
Residuals 30 12774277108.3758 425809236.9459


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 62965.0 0.0   1   0.0 0.0 62965.0, 62965.0 -0.01
A/J m 44871.0 24639.0   2   17422.0 0.549 27448.0, 62293.0 -0.1
AKR/J m 40333.0 0.0   1   0.0 0.0 40333.0, 40333.0 -0.12
AXB10/PgnJ m 19629.0 0.0   1   0.0 0.0 19629.0, 19629.0 -0.23
AXB12/PgnJ m 18154.0 0.0   1   0.0 0.0 18154.0, 18154.0 -0.23
AXB13/PgnJ m 14405.0 0.0   1   0.0 0.0 14405.0, 14405.0 -0.25
AXB15/PgnJ m 22764.0 0.0   1   0.0 0.0 22764.0, 22764.0 -0.21
AXB19a/PgnJ m 33800.0 0.0   1   0.0 0.0 33800.0, 33800.0 -0.16
AXB19b/PgnJ m 30460.0 256.0   2   181.0 0.0084 30279.0, 30641.0 -0.17
AXB19/PgnJ m 28045.0 0.0   1   0.0 0.0 28045.0, 28045.0 -0.18
AXB1/PgnJ m 339483.0 0.0   1   0.0 0.0 339483.0, 339483.0 1.36
AXB23/PgnJ m 13119.0 0.0   1   0.0 0.0 13119.0, 13119.0 -0.26
AXB24/PgnJ m 34377.0 18531.0   2   13103.0 0.539 21273.0, 47480.0 -0.15
AXB2/PgnJ m 115043.0 0.0   1   0.0 0.0 115043.0, 115043.0 0.25
AXB4/PgnJ m 98230.0 0.0   1   0.0 0.0 98230.0, 98230.0 0.16
AXB5/PgnJ m 30626.0 0.0   1   0.0 0.0 30626.0, 30626.0 -0.17
AXB6/PgnJ m 18368.0 0.0   1   0.0 0.0 18368.0, 18368.0 -0.23
AXB8/PgnJ m 48120.0 0.0   1   0.0 0.0 48120.0, 48120.0 -0.08
BALB/cJ m 32693.0 2229.0   3 1287.0 0.0682 30518.0, 34972.0 -0.16
BTBR T+ Itpr3tf/J m 17627.0 0.0   1   0.0 0.0 17627.0, 17627.0 -0.24
BUB/BnJ m 29490.0 0.0   1   0.0 0.0 29490.0, 29490.0 -0.18
BXA11/PgnJ m 20639.0 0.0   1   0.0 0.0 20639.0, 20639.0 -0.22
BXA12/PgnJ m 48507.0 0.0   1   0.0 0.0 48507.0, 48507.0 -0.08
BXA13/PgnJ m 30181.0 0.0   1   0.0 0.0 30181.0, 30181.0 -0.17
BXA14/PgnJ m 40198.0 0.0   1   0.0 0.0 40198.0, 40198.0 -0.12
BXA16/PgnJ m 77333.0 87182.0   2   61647.0 1.13 15686.0, 138980.0 0.06
BXA1/PgnJ m 18478.0 0.0   1   0.0 0.0 18478.0, 18478.0 -0.23
BXA24/PgnJ m 24912.0 0.0   1   0.0 0.0 24912.0, 24912.0 -0.2
BXA25/PgnJ m 25966.0 0.0   1   0.0 0.0 25966.0, 25966.0 -0.19
BXA26/PgnJ m 44256.0 0.0   1   0.0 0.0 44256.0, 44256.0 -0.1
BXA2/PgnJ m 24480.0 0.0   1   0.0 0.0 24480.0, 24480.0 -0.2
BXA4/PgnJ m 28666.0 0.0   1   0.0 0.0 28666.0, 28666.0 -0.18
BXA7/PgnJ m 35036.0 0.0   1   0.0 0.0 35036.0, 35036.0 -0.15
BXA8/PgnJ m 20366.0 0.0   1   0.0 0.0 20366.0, 20366.0 -0.22
BXD11/TyJ m 55290.0 0.0   1   0.0 0.0 55290.0, 55290.0 -0.05
BXD13/TyJ m 30779.0 0.0   1   0.0 0.0 30779.0, 30779.0 -0.17
BXD14/TyJ m 41515.0 0.0   1   0.0 0.0 41515.0, 41515.0 -0.12
BXD15/TyJ m 27170.0 0.0   1   0.0 0.0 27170.0, 27170.0 -0.19
BXD18/TyJ m 21753.0 0.0   1   0.0 0.0 21753.0, 21753.0 -0.21
BXD19/TyJ m 52451.0 28439.0   2   20109.0 0.542 32342.0, 72561.0 -0.06
BXD1/TyJ m 39396.0 0.0   1   0.0 0.0 39396.0, 39396.0 -0.13
BXD20/TyJ m 144414.0 0.0   1   0.0 0.0 144414.0, 144414.0 0.39
BXD21/TyJ m 30626.0 0.0   1   0.0 0.0 30626.0, 30626.0 -0.17
BXD22/TyJ m 29504.0 0.0   1   0.0 0.0 29504.0, 29504.0 -0.18
BXD24/TyJ m 31147.0 0.0   1   0.0 0.0 31147.0, 31147.0 -0.17
BXD28/TyJ m 17318.0 6540.0   2   4624.0 0.378 12694.0, 21943.0 -0.24
BXD29-Tlr4lps-2J/J m 24158.0 0.0   1   0.0 0.0 24158.0, 24158.0 -0.2
BXD2/TyJ m 26085.0 0.0   1   0.0 0.0 26085.0, 26085.0 -0.19
BXD32/TyJ m 34118.0 0.0   1   0.0 0.0 34118.0, 34118.0 -0.15
BXD33/TyJ m 176212.0 0.0   1   0.0 0.0 176212.0, 176212.0 0.55
BXD34/TyJ m 1965139.0 0.0   1   0.0 0.0 1965139.0, 1965139.0 9.44
BXD39/TyJ m 34924.0 0.0   1   0.0 0.0 34924.0, 34924.0 -0.15
BXD40/TyJ m 27239.0 0.0   1   0.0 0.0 27239.0, 27239.0 -0.19
BXD42/TyJ m 34220.0 0.0   1   0.0 0.0 34220.0, 34220.0 -0.15
BXD5/TyJ m 31615.0 0.0   1   0.0 0.0 31615.0, 31615.0 -0.17
BXD6/TyJ m 52522.0 0.0   1   0.0 0.0 52522.0, 52522.0 -0.06
BXD8/TyJ m 178442.0 0.0   1   0.0 0.0 178442.0, 178442.0 0.56
BXD9/TyJ m 16459.0 0.0   1   0.0 0.0 16459.0, 16459.0 -0.24
BXH10/TyJ m 24656.0 0.0   1   0.0 0.0 24656.0, 24656.0 -0.2
BXH20/KccJ m 13945.0 0.0   1   0.0 0.0 13945.0, 13945.0 -0.25
BXH22/KccJ m 25269.0 0.0   1   0.0 0.0 25269.0, 25269.0 -0.2
BXH2/TyJ m 20182.0 0.0   1   0.0 0.0 20182.0, 20182.0 -0.22
BXH4/TyJ m 28939.0 17404.0   2   12307.0 0.601 16633.0, 41246.0 -0.18
BXH6/TyJ m 21246.0 0.0   1   0.0 0.0 21246.0, 21246.0 -0.22
BXH8/TyJ m 35678.0 0.0   1   0.0 0.0 35678.0, 35678.0 -0.15
BXH9/TyJ m 18659.0 0.0   1   0.0 0.0 18659.0, 18659.0 -0.23
C3H/HeJ m 34370.0 1533.0   2   1084.0 0.0446 33286.0, 35454.0 -0.15
C57BL/6J m 50001.0 13418.0   5 6001.0 0.268 39198.0, 72821.0 -0.07
C57L/J m 57091.0 0.0   1   0.0 0.0 57091.0, 57091.0 -0.04
C58/J m 220537.0 0.0   1   0.0 0.0 220537.0, 220537.0 0.77
CAST/EiJ m 25612.0 0.0   1   0.0 0.0 25612.0, 25612.0 -0.2
CBA/J m 16421.0 0.0   1   0.0 0.0 16421.0, 16421.0 -0.24
CE/J m 31791.0 0.0   1   0.0 0.0 31791.0, 31791.0 -0.17
CXB11/HiAJ m 17343.0 597.0   2   422.0 0.0344 16921.0, 17765.0 -0.24
CXB12/HiAJ m 41602.0 16825.0   2   11897.0 0.404 29704.0, 53499.0 -0.12
CXB13/HiAJ m 30255.0 14242.0   3 8222.0 0.471 15831.0, 44307.0 -0.17
CXB1/ByJ m 26596.0 17963.0   2   12702.0 0.675 13895.0, 39298.0 -0.19
CXB2/ByJ m 51587.0 18199.0   3 10507.0 0.353 40609.0, 72594.0 -0.07
CXB3/ByJ m 37575.0 13200.0   2   9334.0 0.351 28241.0, 46909.0 -0.14
CXB4/ByJ m 16443.0 0.0   1   0.0 0.0 16443.0, 16443.0 -0.24
CXB6/ByJ m 34488.0 7308.0   2   5167.0 0.212 29321.0, 39655.0 -0.15
CXB7/ByJ m 21033.0 0.0   1   0.0 0.0 21033.0, 21033.0 -0.22
CXB8/HiAJ m 26347.0 5439.0   3 3140.0 0.206 20226.0, 30626.0 -0.19
CXB9/HiAJ m 31545.0 2092.0   3 1208.0 0.0663 30106.0, 33944.0 -0.17
DBA/2J m 32031.0 11053.0   4 5526.0 0.345 22404.0, 42478.0 -0.16
FVB/NJ m 45804.0 0.0   1   0.0 0.0 45804.0, 45804.0 -0.1
I/LnJ m 24770.0 0.0   1   0.0 0.0 24770.0, 24770.0 -0.2
KK/HlJ m 31467.0 0.0   1   0.0 0.0 31467.0, 31467.0 -0.17
LG/J m 11365.0 0.0   1   0.0 0.0 11365.0, 11365.0 -0.27
LP/J m 22233.0 0.0   1   0.0 0.0 22233.0, 22233.0 -0.21
MA/MyJ m 26114.0 0.0   1   0.0 0.0 26114.0, 26114.0 -0.19
NOD/ShiLtJ m 33708.0 0.0   1   0.0 0.0 33708.0, 33708.0 -0.16
NON/ShiLtJ m 60395.0 0.0   1   0.0 0.0 60395.0, 60395.0 -0.02
NZW/LacJ m 15012.0 0.0   1   0.0 0.0 15012.0, 15012.0 -0.25
PL/J m 17851.0 0.0   1   0.0 0.0 17851.0, 17851.0 -0.23
RIIIS/J m 31462.0 0.0   1   0.0 0.0 31462.0, 31462.0 -0.17
SEA/GnJ m 16880.0 0.0   1   0.0 0.0 16880.0, 16880.0 -0.24
SJL/J m 18624.0 0.0   1   0.0 0.0 18624.0, 18624.0 -0.23
SM/J m 449456.0 0.0   1   0.0 0.0 449456.0, 449456.0 1.91
SWR/J m 51157.0 0.0   1   0.0 0.0 51157.0, 51157.0 -0.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 44870.55 14591.2514 74669.8609 15071.2391
AXB19b/PgnJ m 30459.7 14591.2514 60259.0109 660.3891
AXB24/PgnJ m 34376.65 14591.2514 64175.9609 4577.3391
BALB/cJ m 32692.9333 11913.7069 57023.9688 8361.8979
BXA16/PgnJ m 77333.2 14591.2514 107132.5109 47533.8891
BXD19/TyJ m 52451.45 14591.2514 82250.7609 22652.1391
BXD28/TyJ m 17318.25 14591.2514 47117.5609 0.0
BXH4/TyJ m 28939.3 14591.2514 58738.6109 0.0
C3H/HeJ m 34369.85 14591.2514 64169.1609 4570.5391
C57BL/6J m 50000.6 9228.3177 68847.339 31153.861
CXB11/HiAJ m 17343.1 14591.2514 47142.4109 0.0
CXB12/HiAJ m 41601.65 14591.2514 71400.9609 11802.3391
CXB13/HiAJ m 30254.7 11913.7069 54585.7355 5923.6645
CXB1/ByJ m 26596.45 14591.2514 56395.7609 0.0
CXB2/ByJ m 51587.3333 11913.7069 75918.3688 27256.2979
CXB3/ByJ m 37575.0 14591.2514 67374.3109 7775.6891
CXB6/ByJ m 34488.1 14591.2514 64287.4109 4688.7891
CXB8/HiAJ m 26346.7 11913.7069 50677.7355 2015.6645
CXB9/HiAJ m 31545.1 11913.7069 55876.1355 7214.0645
DBA/2J m 32030.675 10317.5728 53101.9698 10959.3802




  GWAS USING LINEAR MIXED MODELS