Project measure / variable:   HMDPpheno6   GSH

ID, description, units MPD:50122   GSH   liver glutathione, reduced (GSH) (16h fast), relative abundance    
Data set, strains HMDPpheno6   HMDP w/par   104 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno6 - liver glutathione, reduced (GSH) (16h fast), relative abundance

SJL/JAXB6/PgnJC58/JBXD20/TyJCAST/EiJBXD1/TyJAXB1/PgnJBXD12/TyJBXD33/TyJI/LnJAXB19b/PgnJCXB7/ByJSM/JBXD29-Tlr4<lps-2J>/JBXD19/TyJDBA/2JBXH7/TyJBXD21/TyJBXD36/TyJBXD14/TyJBXH2/TyJAXB19/PgnJBTBR T<+> Itpr3<tf>/JAXB5/PgnJ129X1/SvJBXA14/PgnJBXD22/TyJBXD9/TyJCE/JBXA13/PgnJBXH10/TyJBXD42/TyJBXA16/PgnJLP/JSWR/JBXD2/TyJBXD18/TyJBXH20/KccJBXD34/TyJBXH4/TyJSEA/GnJAXB4/PgnJFVB/NJBXD24/TyJBXA24/PgnJLG/JBXD40/TyJCXB13/HiAJBXH22/KccJBXD15/TyJAXB10/PgnJBXD5/TyJBXH6/TyJCXB11/HiAJBXD24/TyJ-Cep290<rd16>/JAXB19a/PgnJBXA12/PgnJCXB4/ByJBXD6/TyJCXB6/ByJC3H/HeJBXD38/TyJBXA26/PgnJCXB8/HiAJCBA/JBXA25/PgnJBXA2/PgnJC57L/JBALB/cJBXA7/PgnJKK/HlJBXA1/PgnJAXB23/PgnJAXB15/PgnJBXD28/TyJRIIIS/JCXB1/ByJBXD8/TyJCXB2/ByJBXD32/TyJCXB9/HiAJBXD39/TyJBUB/BnJAXB13/PgnJPL/JC57BL/6JBXA8/PgnJCXB12/HiAJNZW/LacJBXD11/TyJAXB24/PgnJNON/ShiLtJAXB2/PgnJA/JAXB12/PgnJAKR/JMA/MyJAXB8/PgnJBXA4/PgnJBXH8/TyJBXD13/TyJNOD/ShiLtJBXH9/TyJCXB3/ByJ (no units) 0200,000400,000600,000800,0001,000,0001,200,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested104 strains
Mean of the strain means254926   None
Median of the strain means219679   None
SD of the strain means± 166916
Coefficient of variation (CV)0.655
Min–max range of strain means73382   –   1327488   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 443062905540.02 21098233597.1438 2.9803 0.0023
Residuals 34 240693087468.675 7079208454.961


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 104 (104)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 313275.0 0.0   1   0.0 0.0 313275.0, 313275.0 0.35
A/J m 114242.0 6285.0   2   4444.0 0.055 109798.0, 118686.0 -0.84
AKR/J m 109374.0 0.0   1   0.0 0.0 109374.0, 109374.0 -0.87
AXB10/PgnJ m 223882.0 0.0   1   0.0 0.0 223882.0, 223882.0 -0.19
AXB12/PgnJ m 113205.0 0.0   1   0.0 0.0 113205.0, 113205.0 -0.85
AXB13/PgnJ m 140023.0 0.0   1   0.0 0.0 140023.0, 140023.0 -0.69
AXB15/PgnJ m 164702.0 0.0   1   0.0 0.0 164702.0, 164702.0 -0.54
AXB19a/PgnJ m 206709.0 0.0   1   0.0 0.0 206709.0, 206709.0 -0.29
AXB19b/PgnJ m 413900.0 49107.0   2   34724.0 0.119 379177.0, 448624.0 0.95
AXB19/PgnJ m 323492.0 0.0   1   0.0 0.0 323492.0, 323492.0 0.41
AXB1/PgnJ m 460663.0 0.0   1   0.0 0.0 460663.0, 460663.0 1.23
AXB23/PgnJ m 167964.0 0.0   1   0.0 0.0 167964.0, 167964.0 -0.52
AXB24/PgnJ m 122919.0 61200.0   2   43275.0 0.498 79644.0, 166194.0 -0.79
AXB2/PgnJ m 115123.0 0.0   1   0.0 0.0 115123.0, 115123.0 -0.84
AXB4/PgnJ m 248946.0 0.0   1   0.0 0.0 248946.0, 248946.0 -0.04
AXB5/PgnJ m 316001.0 0.0   1   0.0 0.0 316001.0, 316001.0 0.37
AXB6/PgnJ m 948459.0 0.0   1   0.0 0.0 948459.0, 948459.0 4.15
AXB8/PgnJ m 105821.0 0.0   1   0.0 0.0 105821.0, 105821.0 -0.89
BALB/cJ m 177279.0 52342.0   3 30220.0 0.295 128655.0, 232679.0 -0.47
BTBR T+ Itpr3tf/J m 322695.0 0.0   1   0.0 0.0 322695.0, 322695.0 0.41
BUB/BnJ m 141422.0 0.0   1   0.0 0.0 141422.0, 141422.0 -0.68
BXA12/PgnJ m 204871.0 0.0   1   0.0 0.0 204871.0, 204871.0 -0.3
BXA13/PgnJ m 294299.0 0.0   1   0.0 0.0 294299.0, 294299.0 0.24
BXA14/PgnJ m 312394.0 0.0   1   0.0 0.0 312394.0, 312394.0 0.34
BXA16/PgnJ m 285339.0 103369.0   2   73093.0 0.362 212246.0, 358432.0 0.18
BXA1/PgnJ m 169530.0 0.0   1   0.0 0.0 169530.0, 169530.0 -0.51
BXA24/PgnJ m 234913.0 0.0   1   0.0 0.0 234913.0, 234913.0 -0.12
BXA25/PgnJ m 180401.0 0.0   1   0.0 0.0 180401.0, 180401.0 -0.45
BXA26/PgnJ m 194120.0 0.0   1   0.0 0.0 194120.0, 194120.0 -0.36
BXA2/PgnJ m 180015.0 0.0   1   0.0 0.0 180015.0, 180015.0 -0.45
BXA4/PgnJ m 100469.0 0.0   1   0.0 0.0 100469.0, 100469.0 -0.93
BXA7/PgnJ m 176661.0 0.0   1   0.0 0.0 176661.0, 176661.0 -0.47
BXA8/PgnJ m 135740.0 0.0   1   0.0 0.0 135740.0, 135740.0 -0.71
BXD11/TyJ m 126871.0 0.0   1   0.0 0.0 126871.0, 126871.0 -0.77
BXD12/TyJ m 432855.0 0.0   1   0.0 0.0 432855.0, 432855.0 1.07
BXD13/TyJ m 99506.0 0.0   1   0.0 0.0 99506.0, 99506.0 -0.93
BXD14/TyJ m 328803.0 0.0   1   0.0 0.0 328803.0, 328803.0 0.44
BXD15/TyJ m 224207.0 0.0   1   0.0 0.0 224207.0, 224207.0 -0.18
BXD18/TyJ m 276441.0 0.0   1   0.0 0.0 276441.0, 276441.0 0.13
BXD19/TyJ m 354337.0 8787.0   2   6214.0 0.0248 348124.0, 360551.0 0.6
BXD1/TyJ m 479950.0 0.0   1   0.0 0.0 479950.0, 479950.0 1.35
BXD20/TyJ m 541668.0 0.0   1   0.0 0.0 541668.0, 541668.0 1.72
BXD21/TyJ m 348318.0 0.0   1   0.0 0.0 348318.0, 348318.0 0.56
BXD22/TyJ m 308891.0 0.0   1   0.0 0.0 308891.0, 308891.0 0.32
BXD24/TyJ m 241969.0 0.0   1   0.0 0.0 241969.0, 241969.0 -0.08
BXD24/TyJ-Cep290rd16/J m 211884.0 0.0   1   0.0 0.0 211884.0, 211884.0 -0.26
BXD28/TyJ m 161588.0 17449.0   2   12339.0 0.108 149250.0, 173927.0 -0.56
BXD29-Tlr4lps-2J/J m 386395.0 0.0   1   0.0 0.0 386395.0, 386395.0 0.79
BXD2/TyJ m 277334.0 0.0   1   0.0 0.0 277334.0, 277334.0 0.13
BXD32/TyJ m 149412.0 0.0   1   0.0 0.0 149412.0, 149412.0 -0.63
BXD33/TyJ m 429423.0 0.0   1   0.0 0.0 429423.0, 429423.0 1.05
BXD34/TyJ m 273753.0 0.0   1   0.0 0.0 273753.0, 273753.0 0.11
BXD36/TyJ m 338654.0 0.0   1   0.0 0.0 338654.0, 338654.0 0.5
BXD38/TyJ m 194413.0 0.0   1   0.0 0.0 194413.0, 194413.0 -0.36
BXD39/TyJ m 143582.0 0.0   1   0.0 0.0 143582.0, 143582.0 -0.67
BXD40/TyJ m 229473.0 0.0   1   0.0 0.0 229473.0, 229473.0 -0.15
BXD42/TyJ m 285439.0 0.0   1   0.0 0.0 285439.0, 285439.0 0.18
BXD5/TyJ m 221936.0 0.0   1   0.0 0.0 221936.0, 221936.0 -0.2
BXD6/TyJ m 202194.0 0.0   1   0.0 0.0 202194.0, 202194.0 -0.32
BXD8/TyJ m 153808.0 0.0   1   0.0 0.0 153808.0, 153808.0 -0.61
BXD9/TyJ m 301832.0 0.0   1   0.0 0.0 301832.0, 301832.0 0.28
BXH10/TyJ m 291110.0 0.0   1   0.0 0.0 291110.0, 291110.0 0.22
BXH20/KccJ m 273860.0 0.0   1   0.0 0.0 273860.0, 273860.0 0.11
BXH22/KccJ m 228413.0 0.0   1   0.0 0.0 228413.0, 228413.0 -0.16
BXH2/TyJ m 327456.0 0.0   1   0.0 0.0 327456.0, 327456.0 0.43
BXH4/TyJ m 271820.0 98113.0   2   69376.0 0.361 202444.0, 341196.0 0.1
BXH6/TyJ m 217422.0 0.0   1   0.0 0.0 217422.0, 217422.0 -0.22
BXH7/TyJ m 349438.0 0.0   1   0.0 0.0 349438.0, 349438.0 0.57
BXH8/TyJ m 99855.0 0.0   1   0.0 0.0 99855.0, 99855.0 -0.93
BXH9/TyJ m 85157.0 0.0   1   0.0 0.0 85157.0, 85157.0 -1.02
C3H/HeJ m 198148.0 53333.0   2   37712.0 0.269 160436.0, 235860.0 -0.34
C57BL/6J m 137397.0 10790.0   5 4826.0 0.0785 127981.0, 151174.0 -0.7
C57L/J m 179642.0 0.0   1   0.0 0.0 179642.0, 179642.0 -0.45
C58/J m 621024.0 0.0   1   0.0 0.0 621024.0, 621024.0 2.19
CAST/EiJ m 481177.0 0.0   1   0.0 0.0 481177.0, 481177.0 1.36
CBA/J m 185657.0 0.0   1   0.0 0.0 185657.0, 185657.0 -0.41
CE/J m 298207.0 0.0   1   0.0 0.0 298207.0, 298207.0 0.26
CXB11/HiAJ m 213568.0 200820.0   2   142001.0 0.94 71567.0, 355568.0 -0.25
CXB12/HiAJ m 132642.0 11717.0   2   8285.0 0.0883 124356.0, 140927.0 -0.73
CXB13/HiAJ m 228830.0 142901.0   3 82504.0 0.624 144406.0, 393823.0 -0.16
CXB1/ByJ m 157238.0 55934.0   3 32294.0 0.356 110617.0, 219259.0 -0.59
CXB2/ByJ m 150250.0 71608.0   3 41343.0 0.477 86922.0, 227956.0 -0.63
CXB3/ByJ m 73382.0 41593.0   2   29410.0 0.567 43972.0, 102793.0 -1.09
CXB4/ByJ m 202805.0 43978.0   2   31097.0 0.217 171708.0, 233902.0 -0.31
CXB6/ByJ m 201278.0 131088.0   3 75684.0 0.651 63886.0, 324989.0 -0.32
CXB7/ByJ m 397571.0 183845.0   2   129998.0 0.462 267572.0, 527569.0 0.85
CXB8/HiAJ m 194068.0 7218.0   3 4167.0 0.0372 186136.0, 200248.0 -0.36
CXB9/HiAJ m 145705.0 109432.0   3 63181.0 0.751 34101.0, 252827.0 -0.65
DBA/2J m 349564.0 61395.0   4 30698.0 0.176 296142.0, 425254.0 0.57
FVB/NJ m 247911.0 0.0   1   0.0 0.0 247911.0, 247911.0 -0.04
I/LnJ m 414191.0 0.0   1   0.0 0.0 414191.0, 414191.0 0.95
KK/HlJ m 175381.0 0.0   1   0.0 0.0 175381.0, 175381.0 -0.48
LG/J m 232950.0 0.0   1   0.0 0.0 232950.0, 232950.0 -0.13
LP/J m 284315.0 0.0   1   0.0 0.0 284315.0, 284315.0 0.18
MA/MyJ m 106192.0 0.0   1   0.0 0.0 106192.0, 106192.0 -0.89
NOD/ShiLtJ m 96646.0 0.0   1   0.0 0.0 96646.0, 96646.0 -0.95
NON/ShiLtJ m 122552.0 0.0   1   0.0 0.0 122552.0, 122552.0 -0.79
NZW/LacJ m 128798.0 0.0   1   0.0 0.0 128798.0, 128798.0 -0.76
PL/J m 139108.0 0.0   1   0.0 0.0 139108.0, 139108.0 -0.69
RIIIS/J m 160437.0 0.0   1   0.0 0.0 160437.0, 160437.0 -0.57
SEA/GnJ m 266168.0 0.0   1   0.0 0.0 266168.0, 266168.0 0.07
SJL/J m 1327488.0 0.0   1   0.0 0.0 1327488.0, 1327488.0 6.43
SM/J m 393213.0 0.0   1   0.0 0.0 393213.0, 393213.0 0.83
SWR/J m 280468.0 0.0   1   0.0 0.0 280468.0, 280468.0 0.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 114242.15 59494.5731 235149.6695 0.0
AXB19b/PgnJ m 413900.5 59494.5731 534808.0195 292992.9805
AXB24/PgnJ m 122918.85 59494.5731 243826.3695 2011.3305
BALB/cJ m 177279.2333 48577.1155 275999.8096 78558.6571
BXA16/PgnJ m 285338.95 59494.5731 406246.4695 164431.4305
BXD19/TyJ m 354337.35 59494.5731 475244.8695 233429.8305
BXD28/TyJ m 161588.15 59494.5731 282495.6695 40680.6305
BXH4/TyJ m 271820.05 59494.5731 392727.5695 150912.5305
C3H/HeJ m 198148.3 59494.5731 319055.8195 77240.7805
C57BL/6J m 137396.86 37627.6719 213865.4896 60928.2304
CXB11/HiAJ m 213567.5 59494.5731 334475.0195 92659.9805
CXB12/HiAJ m 132641.5 59494.5731 253549.0195 11733.9805
CXB13/HiAJ m 228829.8667 48577.1155 327550.4429 130109.2904
CXB1/ByJ m 157238.0667 48577.1155 255958.6429 58517.4904
CXB2/ByJ m 150249.9333 48577.1155 248970.5096 51529.3571
CXB3/ByJ m 73382.25 59494.5731 194289.7695 0.0
CXB4/ByJ m 202804.7 59494.5731 323712.2195 81897.1805
CXB6/ByJ m 201277.7 48577.1155 299998.2763 102557.1237
CXB7/ByJ m 397570.7 59494.5731 518478.2195 276663.1805
CXB8/HiAJ m 194068.1333 48577.1155 292788.7096 95347.5571
CXB9/HiAJ m 145705.4333 48577.1155 244426.0096 46984.8571
DBA/2J m 349563.875 42069.0161 435058.4019 264069.3481




  GWAS USING LINEAR MIXED MODELS

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