Project measure / variable:   HMDPpheno6   Gln

ID, description, units MPD:50119   Gln   liver glutamine (16h fast), relative abundance    
Data set, strains HMDPpheno6   HMDP w/par   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno6 - liver glutamine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means11644440   None
Median of the strain means11832954   None
SD of the strain means± 1708068
Coefficient of variation (CV)0.147
Min–max range of strain means7562430   –   15744703   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 106480912126682.0 5070519625080.1 1.4404 0.1678
Residuals 34 119687635114681.0 3520224562196.5


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 13088010.0 0.0   1   0.0 0.0 13088010.0, 13088010.0 0.85
A/J m 9290832.0 420719.0   2   297493.0 0.0453 8993339.0, 9588325.0 -1.38
AKR/J m 11054068.0 0.0   1   0.0 0.0 11054068.0, 11054068.0 -0.35
AXB10/PgnJ m 13788217.0 0.0   1   0.0 0.0 13788217.0, 13788217.0 1.26
AXB12/PgnJ m 11235387.0 0.0   1   0.0 0.0 11235387.0, 11235387.0 -0.24
AXB13/PgnJ m 11819010.0 0.0   1   0.0 0.0 11819010.0, 11819010.0 0.1
AXB15/PgnJ m 9426417.0 0.0   1   0.0 0.0 9426417.0, 9426417.0 -1.3
AXB19a/PgnJ m 12013003.0 0.0   1   0.0 0.0 12013003.0, 12013003.0 0.22
AXB19b/PgnJ m 11104465.0 1288426.0   2   911055.0 0.116 10193410.0, 12015520.0 -0.32
AXB19/PgnJ m 12542279.0 0.0   1   0.0 0.0 12542279.0, 12542279.0 0.53
AXB1/PgnJ m 9377234.0 0.0   1   0.0 0.0 9377234.0, 9377234.0 -1.33
AXB23/PgnJ m 12691189.0 0.0   1   0.0 0.0 12691189.0, 12691189.0 0.61
AXB24/PgnJ m 11981534.0 2393160.0   2   1692220.0 0.2 10289314.0, 13673754.0 0.2
AXB2/PgnJ m 10618389.0 0.0   1   0.0 0.0 10618389.0, 10618389.0 -0.6
AXB4/PgnJ m 14610455.0 0.0   1   0.0 0.0 14610455.0, 14610455.0 1.74
AXB5/PgnJ m 12422252.0 0.0   1   0.0 0.0 12422252.0, 12422252.0 0.46
AXB6/PgnJ m 11956367.0 0.0   1   0.0 0.0 11956367.0, 11956367.0 0.18
AXB8/PgnJ m 9331433.0 0.0   1   0.0 0.0 9331433.0, 9331433.0 -1.35
BALB/cJ m 10050353.0 1747241.0   3 1008770.0 0.174 8211405.0, 11688543.0 -0.93
BTBR T+ Itpr3tf/J m 12143657.0 0.0   1   0.0 0.0 12143657.0, 12143657.0 0.29
BUB/BnJ m 10541641.0 0.0   1   0.0 0.0 10541641.0, 10541641.0 -0.65
BXA11/PgnJ m 13072181.0 0.0   1   0.0 0.0 13072181.0, 13072181.0 0.84
BXA12/PgnJ m 9058606.0 0.0   1   0.0 0.0 9058606.0, 9058606.0 -1.51
BXA13/PgnJ m 11889149.0 0.0   1   0.0 0.0 11889149.0, 11889149.0 0.14
BXA14/PgnJ m 11152138.0 0.0   1   0.0 0.0 11152138.0, 11152138.0 -0.29
BXA16/PgnJ m 12381778.0 4580398.0   2   3238830.0 0.37 9142948.0, 15620609.0 0.43
BXA1/PgnJ m 10934472.0 0.0   1   0.0 0.0 10934472.0, 10934472.0 -0.42
BXA24/PgnJ m 12958904.0 0.0   1   0.0 0.0 12958904.0, 12958904.0 0.77
BXA25/PgnJ m 11797211.0 0.0   1   0.0 0.0 11797211.0, 11797211.0 0.09
BXA26/PgnJ m 13593631.0 0.0   1   0.0 0.0 13593631.0, 13593631.0 1.14
BXA2/PgnJ m 12243801.0 0.0   1   0.0 0.0 12243801.0, 12243801.0 0.35
BXA4/PgnJ m 10861549.0 0.0   1   0.0 0.0 10861549.0, 10861549.0 -0.46
BXA7/PgnJ m 8958240.0 0.0   1   0.0 0.0 8958240.0, 8958240.0 -1.57
BXA8/PgnJ m 10090335.0 0.0   1   0.0 0.0 10090335.0, 10090335.0 -0.91
BXD11/TyJ m 11964254.0 0.0   1   0.0 0.0 11964254.0, 11964254.0 0.19
BXD12/TyJ m 14102562.0 0.0   1   0.0 0.0 14102562.0, 14102562.0 1.44
BXD13/TyJ m 10410047.0 0.0   1   0.0 0.0 10410047.0, 10410047.0 -0.72
BXD14/TyJ m 10665018.0 0.0   1   0.0 0.0 10665018.0, 10665018.0 -0.57
BXD15/TyJ m 10833279.0 0.0   1   0.0 0.0 10833279.0, 10833279.0 -0.47
BXD18/TyJ m 12006681.0 0.0   1   0.0 0.0 12006681.0, 12006681.0 0.21
BXD19/TyJ m 12129565.0 622752.0   2   440352.0 0.0513 11689213.0, 12569917.0 0.28
BXD1/TyJ m 11067188.0 0.0   1   0.0 0.0 11067188.0, 11067188.0 -0.34
BXD20/TyJ m 15265034.0 0.0   1   0.0 0.0 15265034.0, 15265034.0 2.12
BXD21/TyJ m 10803927.0 0.0   1   0.0 0.0 10803927.0, 10803927.0 -0.49
BXD22/TyJ m 9717335.0 0.0   1   0.0 0.0 9717335.0, 9717335.0 -1.13
BXD24/TyJ m 9909307.0 0.0   1   0.0 0.0 9909307.0, 9909307.0 -1.02
BXD24/TyJ-Cep290rd16/J m 8715729.0 0.0   1   0.0 0.0 8715729.0, 8715729.0 -1.71
BXD28/TyJ m 13837367.0 292638.0   2   206926.0 0.0211 13630441.0, 14044293.0 1.28
BXD29-Tlr4lps-2J/J m 11450040.0 0.0   1   0.0 0.0 11450040.0, 11450040.0 -0.11
BXD2/TyJ m 14940828.0 0.0   1   0.0 0.0 14940828.0, 14940828.0 1.93
BXD32/TyJ m 12286775.0 0.0   1   0.0 0.0 12286775.0, 12286775.0 0.38
BXD33/TyJ m 9795589.0 0.0   1   0.0 0.0 9795589.0, 9795589.0 -1.08
BXD34/TyJ m 13184081.0 0.0   1   0.0 0.0 13184081.0, 13184081.0 0.9
BXD36/TyJ m 7562430.0 0.0   1   0.0 0.0 7562430.0, 7562430.0 -2.39
BXD38/TyJ m 9047517.0 0.0   1   0.0 0.0 9047517.0, 9047517.0 -1.52
BXD39/TyJ m 13689116.0 0.0   1   0.0 0.0 13689116.0, 13689116.0 1.2
BXD40/TyJ m 10140787.0 0.0   1   0.0 0.0 10140787.0, 10140787.0 -0.88
BXD42/TyJ m 13362031.0 0.0   1   0.0 0.0 13362031.0, 13362031.0 1.01
BXD5/TyJ m 13144269.0 0.0   1   0.0 0.0 13144269.0, 13144269.0 0.88
BXD6/TyJ m 9724863.0 0.0   1   0.0 0.0 9724863.0, 9724863.0 -1.12
BXD8/TyJ m 8971458.0 0.0   1   0.0 0.0 8971458.0, 8971458.0 -1.56
BXD9/TyJ m 13581178.0 0.0   1   0.0 0.0 13581178.0, 13581178.0 1.13
BXH10/TyJ m 11743907.0 0.0   1   0.0 0.0 11743907.0, 11743907.0 0.06
BXH19/TyJ m 14152675.0 0.0   1   0.0 0.0 14152675.0, 14152675.0 1.47
BXH20/KccJ m 11213962.0 0.0   1   0.0 0.0 11213962.0, 11213962.0 -0.25
BXH22/KccJ m 11896072.0 0.0   1   0.0 0.0 11896072.0, 11896072.0 0.15
BXH2/TyJ m 12718065.0 0.0   1   0.0 0.0 12718065.0, 12718065.0 0.63
BXH4/TyJ m 13807501.0 627470.0   2   443688.0 0.0454 13363813.0, 14251189.0 1.27
BXH6/TyJ m 8994033.0 0.0   1   0.0 0.0 8994033.0, 8994033.0 -1.55
BXH7/TyJ m 10511773.0 0.0   1   0.0 0.0 10511773.0, 10511773.0 -0.66
BXH8/TyJ m 12904218.0 0.0   1   0.0 0.0 12904218.0, 12904218.0 0.74
BXH9/TyJ m 12525285.0 0.0   1   0.0 0.0 12525285.0, 12525285.0 0.52
C3H/HeJ m 9854441.0 2337251.0   2   1652686.0 0.237 8201755.0, 11507127.0 -1.05
C57BL/6J m 10438533.0 1783221.0   5 797481.0 0.171 8528699.0, 12451858.0 -0.71
C57L/J m 8566742.0 0.0   1   0.0 0.0 8566742.0, 8566742.0 -1.8
C58/J m 15744703.0 0.0   1   0.0 0.0 15744703.0, 15744703.0 2.4
CAST/EiJ m 12852758.0 0.0   1   0.0 0.0 12852758.0, 12852758.0 0.71
CBA/J m 10413642.0 0.0   1   0.0 0.0 10413642.0, 10413642.0 -0.72
CE/J m 13189209.0 0.0   1   0.0 0.0 13189209.0, 13189209.0 0.9
CXB11/HiAJ m 13572251.0 974481.0   2   689062.0 0.0718 12883189.0, 14261313.0 1.13
CXB12/HiAJ m 13785142.0 2609426.0   2   1845142.0 0.189 11940000.0, 15630285.0 1.25
CXB13/HiAJ m 12246016.0 1426707.0   3 823710.0 0.117 10599262.0, 13109945.0 0.35
CXB1/ByJ m 12813703.0 996328.0   3 575230.0 0.0778 11929220.0, 13893076.0 0.68
CXB2/ByJ m 13685864.0 3696324.0   3 2134074.0 0.27 9786946.0, 17139198.0 1.2
CXB3/ByJ m 10882342.0 1229589.0   2   869450.0 0.113 10012892.0, 11751793.0 -0.45
CXB4/ByJ m 13869543.0 1986779.0   2   1404865.0 0.143 12464678.0, 15274408.0 1.3
CXB6/ByJ m 11876801.0 1554062.0   3 897238.0 0.131 10620461.0, 13614618.0 0.14
CXB7/ByJ m 12903844.0 345453.0   2   244272.0 0.0268 12659572.0, 13148116.0 0.74
CXB8/HiAJ m 13609945.0 1413825.0   3 816272.0 0.104 12076678.0, 14862088.0 1.15
CXB9/HiAJ m 11058791.0 1785032.0   3 1030588.0 0.161 9013363.0, 12301748.0 -0.34
DBA/2J m 11752438.0 1164521.0   4 582261.0 0.0991 10374055.0, 13216573.0 0.06
FVB/NJ m 10760668.0 0.0   1   0.0 0.0 10760668.0, 10760668.0 -0.52
I/LnJ m 11603806.0 0.0   1   0.0 0.0 11603806.0, 11603806.0 -0.02
KK/HlJ m 12980850.0 0.0   1   0.0 0.0 12980850.0, 12980850.0 0.78
LG/J m 11846899.0 0.0   1   0.0 0.0 11846899.0, 11846899.0 0.12
LP/J m 10018252.0 0.0   1   0.0 0.0 10018252.0, 10018252.0 -0.95
MA/MyJ m 9132700.0 0.0   1   0.0 0.0 9132700.0, 9132700.0 -1.47
NOD/ShiLtJ m 11357767.0 0.0   1   0.0 0.0 11357767.0, 11357767.0 -0.17
NON/ShiLtJ m 8984778.0 0.0   1   0.0 0.0 8984778.0, 8984778.0 -1.56
NZW/LacJ m 10647618.0 0.0   1   0.0 0.0 10647618.0, 10647618.0 -0.58
PL/J m 12476329.0 0.0   1   0.0 0.0 12476329.0, 12476329.0 0.49
RIIIS/J m 14902607.0 0.0   1   0.0 0.0 14902607.0, 14902607.0 1.91
SEA/GnJ m 12081593.0 0.0   1   0.0 0.0 12081593.0, 12081593.0 0.26
SJL/J m 12201442.0 0.0   1   0.0 0.0 12201442.0, 12201442.0 0.33
SM/J m 9521713.0 0.0   1   0.0 0.0 9521713.0, 9521713.0 -1.24
SWR/J m 9822953.0 0.0   1   0.0 0.0 9822953.0, 9822953.0 -1.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 9290832.0 1326692.233 11986995.0061 6594668.9939
AXB19b/PgnJ m 11104465.0 1326692.233 13800628.0061 8408301.9939
AXB24/PgnJ m 11981534.0 1326692.233 14677697.0061 9285370.9939
BALB/cJ m 10050353.0 1083239.6722 12251760.8761 7848945.1239
BXA16/PgnJ m 12381778.5 1326692.233 15077941.5061 9685615.4939
BXD19/TyJ m 12129565.0 1326692.233 14825728.0061 9433401.9939
BXD28/TyJ m 13837367.0 1326692.233 16533530.0061 11141203.9939
BXH4/TyJ m 13807501.0 1326692.233 16503664.0061 11111337.9939
C3H/HeJ m 9854441.0 1326692.233 12550604.0061 7158277.9939
C57BL/6J m 10438533.0 839073.8421 12143736.2085 8733329.7915
CXB11/HiAJ m 13572251.0 1326692.233 16268414.0061 10876087.9939
CXB12/HiAJ m 13785142.5 1326692.233 16481305.5061 11088979.4939
CXB13/HiAJ m 12246015.6667 1083239.6722 14447423.5427 10044607.7906
CXB1/ByJ m 12813703.0 1083239.6722 15015110.8761 10612295.1239
CXB2/ByJ m 13685864.3333 1083239.6722 15887272.2094 11484456.4573
CXB3/ByJ m 10882342.5 1326692.233 13578505.5061 8186179.4939
CXB4/ByJ m 13869543.0 1326692.233 16565706.0061 11173379.9939
CXB6/ByJ m 11876801.0 1083239.6722 14078208.8761 9675393.1239
CXB7/ByJ m 12903844.0 1326692.233 15600007.0061 10207680.9939
CXB8/HiAJ m 13609944.6667 1083239.6722 15811352.5427 11408536.7906
CXB9/HiAJ m 11058790.6667 1083239.6722 13260198.5427 8857382.7906
DBA/2J m 11752438.5 938113.0745 13658913.6448 9845963.3552




  GWAS USING LINEAR MIXED MODELS