Project measure / variable:   HMDPpheno6   Asn

ID, description, units MPD:50102   Asn   liver asparagine (16h fast), relative abundance    
Data set, strains HMDPpheno6   HMDP w/par   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno6 - liver asparagine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means292361   None
Median of the strain means264036   None
SD of the strain means± 120161
Coefficient of variation (CV)0.411
Min–max range of strain means108218   –   678839   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 774419368797.743 36877112799.8925 2.2832 0.0156
Residuals 34 549145765274.943 16151346037.4983


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 219938.0 0.0   1   0.0 0.0 219938.0, 219938.0 -0.6
A/J m 215148.0 24469.0   2   17302.0 0.114 197846.0, 232450.0 -0.64
AKR/J m 301910.0 0.0   1   0.0 0.0 301910.0, 301910.0 0.08
AXB10/PgnJ m 299531.0 0.0   1   0.0 0.0 299531.0, 299531.0 0.06
AXB12/PgnJ m 209574.0 0.0   1   0.0 0.0 209574.0, 209574.0 -0.69
AXB13/PgnJ m 274342.0 0.0   1   0.0 0.0 274342.0, 274342.0 -0.15
AXB15/PgnJ m 218475.0 0.0   1   0.0 0.0 218475.0, 218475.0 -0.61
AXB19a/PgnJ m 274586.0 0.0   1   0.0 0.0 274586.0, 274586.0 -0.15
AXB19b/PgnJ m 463199.0 7963.0   2   5631.0 0.0172 457568.0, 468830.0 1.42
AXB19/PgnJ m 440947.0 0.0   1   0.0 0.0 440947.0, 440947.0 1.24
AXB1/PgnJ m 365712.0 0.0   1   0.0 0.0 365712.0, 365712.0 0.61
AXB23/PgnJ m 264880.0 0.0   1   0.0 0.0 264880.0, 264880.0 -0.23
AXB24/PgnJ m 209444.0 53775.0   2   38025.0 0.257 171420.0, 247469.0 -0.69
AXB2/PgnJ m 267182.0 0.0   1   0.0 0.0 267182.0, 267182.0 -0.21
AXB4/PgnJ m 507371.0 0.0   1   0.0 0.0 507371.0, 507371.0 1.79
AXB5/PgnJ m 196782.0 0.0   1   0.0 0.0 196782.0, 196782.0 -0.8
AXB6/PgnJ m 277365.0 0.0   1   0.0 0.0 277365.0, 277365.0 -0.12
AXB8/PgnJ m 223206.0 0.0   1   0.0 0.0 223206.0, 223206.0 -0.58
BALB/cJ m 237582.0 24643.0   3 14228.0 0.104 212606.0, 261877.0 -0.46
BTBR T+ Itpr3tf/J m 156289.0 0.0   1   0.0 0.0 156289.0, 156289.0 -1.13
BUB/BnJ m 501035.0 0.0   1   0.0 0.0 501035.0, 501035.0 1.74
BXA11/PgnJ m 234238.0 0.0   1   0.0 0.0 234238.0, 234238.0 -0.48
BXA12/PgnJ m 109439.0 0.0   1   0.0 0.0 109439.0, 109439.0 -1.52
BXA13/PgnJ m 242705.0 0.0   1   0.0 0.0 242705.0, 242705.0 -0.41
BXA14/PgnJ m 280970.0 0.0   1   0.0 0.0 280970.0, 280970.0 -0.09
BXA16/PgnJ m 193161.0 99677.0   2   70482.0 0.516 122678.0, 263643.0 -0.83
BXA1/PgnJ m 263191.0 0.0   1   0.0 0.0 263191.0, 263191.0 -0.24
BXA24/PgnJ m 678839.0 0.0   1   0.0 0.0 678839.0, 678839.0 3.22
BXA25/PgnJ m 192282.0 0.0   1   0.0 0.0 192282.0, 192282.0 -0.83
BXA26/PgnJ m 315098.0 0.0   1   0.0 0.0 315098.0, 315098.0 0.19
BXA2/PgnJ m 500883.0 0.0   1   0.0 0.0 500883.0, 500883.0 1.74
BXA4/PgnJ m 274301.0 0.0   1   0.0 0.0 274301.0, 274301.0 -0.15
BXA7/PgnJ m 384161.0 0.0   1   0.0 0.0 384161.0, 384161.0 0.76
BXA8/PgnJ m 180952.0 0.0   1   0.0 0.0 180952.0, 180952.0 -0.93
BXD11/TyJ m 267556.0 0.0   1   0.0 0.0 267556.0, 267556.0 -0.21
BXD12/TyJ m 393375.0 0.0   1   0.0 0.0 393375.0, 393375.0 0.84
BXD13/TyJ m 194184.0 0.0   1   0.0 0.0 194184.0, 194184.0 -0.82
BXD14/TyJ m 320194.0 0.0   1   0.0 0.0 320194.0, 320194.0 0.23
BXD15/TyJ m 476156.0 0.0   1   0.0 0.0 476156.0, 476156.0 1.53
BXD18/TyJ m 262302.0 0.0   1   0.0 0.0 262302.0, 262302.0 -0.25
BXD19/TyJ m 197584.0 47832.0   2   33822.0 0.242 163762.0, 231406.0 -0.79
BXD1/TyJ m 178878.0 0.0   1   0.0 0.0 178878.0, 178878.0 -0.94
BXD20/TyJ m 299341.0 0.0   1   0.0 0.0 299341.0, 299341.0 0.06
BXD21/TyJ m 188222.0 0.0   1   0.0 0.0 188222.0, 188222.0 -0.87
BXD22/TyJ m 358272.0 0.0   1   0.0 0.0 358272.0, 358272.0 0.55
BXD24/TyJ m 180023.0 0.0   1   0.0 0.0 180023.0, 180023.0 -0.93
BXD24/TyJ-Cep290rd16/J m 168056.0 0.0   1   0.0 0.0 168056.0, 168056.0 -1.03
BXD28/TyJ m 485994.0 301138.0   2   212937.0 0.62 273058.0, 698931.0 1.61
BXD29-Tlr4lps-2J/J m 272400.0 0.0   1   0.0 0.0 272400.0, 272400.0 -0.17
BXD2/TyJ m 431889.0 0.0   1   0.0 0.0 431889.0, 431889.0 1.16
BXD32/TyJ m 501940.0 0.0   1   0.0 0.0 501940.0, 501940.0 1.74
BXD33/TyJ m 569397.0 0.0   1   0.0 0.0 569397.0, 569397.0 2.31
BXD34/TyJ m 253282.0 0.0   1   0.0 0.0 253282.0, 253282.0 -0.33
BXD36/TyJ m 203233.0 0.0   1   0.0 0.0 203233.0, 203233.0 -0.74
BXD38/TyJ m 186840.0 0.0   1   0.0 0.0 186840.0, 186840.0 -0.88
BXD39/TyJ m 249023.0 0.0   1   0.0 0.0 249023.0, 249023.0 -0.36
BXD40/TyJ m 170051.0 0.0   1   0.0 0.0 170051.0, 170051.0 -1.02
BXD42/TyJ m 254435.0 0.0   1   0.0 0.0 254435.0, 254435.0 -0.32
BXD5/TyJ m 320847.0 0.0   1   0.0 0.0 320847.0, 320847.0 0.24
BXD6/TyJ m 228773.0 0.0   1   0.0 0.0 228773.0, 228773.0 -0.53
BXD8/TyJ m 177308.0 0.0   1   0.0 0.0 177308.0, 177308.0 -0.96
BXD9/TyJ m 284366.0 0.0   1   0.0 0.0 284366.0, 284366.0 -0.07
BXH10/TyJ m 118331.0 0.0   1   0.0 0.0 118331.0, 118331.0 -1.45
BXH19/TyJ m 113231.0 0.0   1   0.0 0.0 113231.0, 113231.0 -1.49
BXH20/KccJ m 396160.0 0.0   1   0.0 0.0 396160.0, 396160.0 0.86
BXH22/KccJ m 208536.0 0.0   1   0.0 0.0 208536.0, 208536.0 -0.7
BXH2/TyJ m 250145.0 0.0   1   0.0 0.0 250145.0, 250145.0 -0.35
BXH4/TyJ m 288696.0 18912.0   2   13373.0 0.0655 275324.0, 302069.0 -0.03
BXH6/TyJ m 417408.0 0.0   1   0.0 0.0 417408.0, 417408.0 1.04
BXH7/TyJ m 203644.0 0.0   1   0.0 0.0 203644.0, 203644.0 -0.74
BXH8/TyJ m 387592.0 0.0   1   0.0 0.0 387592.0, 387592.0 0.79
BXH9/TyJ m 223218.0 0.0   1   0.0 0.0 223218.0, 223218.0 -0.58
C3H/HeJ m 245070.0 426.0   2   301.0 0.00174 244769.0, 245371.0 -0.39
C57BL/6J m 407507.0 92283.0   5 41270.0 0.226 272648.0, 505578.0 0.96
C57L/J m 144695.0 0.0   1   0.0 0.0 144695.0, 144695.0 -1.23
C58/J m 616627.0 0.0   1   0.0 0.0 616627.0, 616627.0 2.7
CAST/EiJ m 296657.0 0.0   1   0.0 0.0 296657.0, 296657.0 0.04
CBA/J m 127608.0 0.0   1   0.0 0.0 127608.0, 127608.0 -1.37
CE/J m 186694.0 0.0   1   0.0 0.0 186694.0, 186694.0 -0.88
CXB11/HiAJ m 243817.0 32992.0   2   23329.0 0.135 220488.0, 267146.0 -0.4
CXB12/HiAJ m 486598.0 245870.0   2   173856.0 0.505 312741.0, 660454.0 1.62
CXB13/HiAJ m 434163.0 163428.0   3 94355.0 0.376 309985.0, 619311.0 1.18
CXB1/ByJ m 296604.0 28671.0   3 16553.0 0.0967 267804.0, 325144.0 0.04
CXB2/ByJ m 445118.0 152031.0   3 87775.0 0.342 319531.0, 614140.0 1.27
CXB3/ByJ m 414799.0 23354.0   2   16514.0 0.0563 398285.0, 431313.0 1.02
CXB4/ByJ m 345989.0 64816.0   2   45832.0 0.187 300156.0, 391821.0 0.45
CXB6/ByJ m 289220.0 55183.0   3 31860.0 0.191 242151.0, 349950.0 -0.03
CXB7/ByJ m 427763.0 91445.0   2   64661.0 0.214 363102.0, 492424.0 1.13
CXB8/HiAJ m 555216.0 248480.0   3 143460.0 0.448 275356.0, 749931.0 2.19
CXB9/HiAJ m 493695.0 210800.0   3 121706.0 0.427 265903.0, 681886.0 1.68
DBA/2J m 176748.0 64964.0   4 32482.0 0.368 116330.0, 250785.0 -0.96
FVB/NJ m 322983.0 0.0   1   0.0 0.0 322983.0, 322983.0 0.25
I/LnJ m 181561.0 0.0   1   0.0 0.0 181561.0, 181561.0 -0.92
KK/HlJ m 218199.0 0.0   1   0.0 0.0 218199.0, 218199.0 -0.62
LG/J m 108218.0 0.0   1   0.0 0.0 108218.0, 108218.0 -1.53
LP/J m 138151.0 0.0   1   0.0 0.0 138151.0, 138151.0 -1.28
MA/MyJ m 376535.0 0.0   1   0.0 0.0 376535.0, 376535.0 0.7
NOD/ShiLtJ m 252586.0 0.0   1   0.0 0.0 252586.0, 252586.0 -0.33
NON/ShiLtJ m 295992.0 0.0   1   0.0 0.0 295992.0, 295992.0 0.03
NZW/LacJ m 181058.0 0.0   1   0.0 0.0 181058.0, 181058.0 -0.93
PL/J m 238455.0 0.0   1   0.0 0.0 238455.0, 238455.0 -0.45
RIIIS/J m 224824.0 0.0   1   0.0 0.0 224824.0, 224824.0 -0.56
SEA/GnJ m 262202.0 0.0   1   0.0 0.0 262202.0, 262202.0 -0.25
SJL/J m 194470.0 0.0   1   0.0 0.0 194470.0, 194470.0 -0.81
SM/J m 302013.0 0.0   1   0.0 0.0 302013.0, 302013.0 0.08
SWR/J m 402859.0 0.0   1   0.0 0.0 402859.0, 402859.0 0.92


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 215148.35 89864.7485 397775.4917 32521.2083
AXB19b/PgnJ m 463198.95 89864.7485 645826.0917 280571.8083
AXB24/PgnJ m 209444.5 89864.7485 392071.6417 26817.3583
BALB/cJ m 237582.3667 73374.2599 386696.8034 88467.9299
BXA16/PgnJ m 193160.9 89864.7485 375788.0417 10533.7583
BXD19/TyJ m 197584.3 89864.7485 380211.4417 14957.1583
BXD28/TyJ m 485994.45 89864.7485 668621.5917 303367.3083
BXH4/TyJ m 288696.2 89864.7485 471323.3417 106069.0583
C3H/HeJ m 245070.25 89864.7485 427697.3917 62443.1083
C57BL/6J m 407507.42 56835.4573 523010.9661 292003.8739
CXB11/HiAJ m 243817.15 89864.7485 426444.2917 61190.0083
CXB12/HiAJ m 486597.7 89864.7485 669224.8417 303970.5583
CXB13/HiAJ m 434163.4333 73374.2599 583277.8701 285048.9966
CXB1/ByJ m 296604.0333 73374.2599 445718.4701 147489.5966
CXB2/ByJ m 445117.7667 73374.2599 594232.2034 296003.3299
CXB3/ByJ m 414799.1 89864.7485 597426.2417 232171.9583
CXB4/ByJ m 345988.65 89864.7485 528615.7917 163361.5083
CXB6/ByJ m 289219.7333 73374.2599 438334.1701 140105.2966
CXB7/ByJ m 427763.35 89864.7485 610390.4917 245136.2083
CXB8/HiAJ m 555215.7 73374.2599 704330.1368 406101.2632
CXB9/HiAJ m 493695.0667 73374.2599 642809.5034 344580.6299
DBA/2J m 176748.5 63543.973 305885.3903 47611.6097




  GWAS USING LINEAR MIXED MODELS