Project measure / variable:   Schughart2   pctbw_d1

ID, description, units MPD:49602   pctbw_d1   body weight as percent of baseline   [%]  post-infection day 1  
influenza A (H1N1) virus study
Data set, strains Schughart2   BXD w/par   56 strains     sex: f     age: 9-18wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Schughart2 - body weight as percent of baseline post-infection day 1



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested56 strains
Mean of the strain means98.1   %
Median of the strain means98.3   %
SD of the strain means± 1.72
Coefficient of variation (CV)0.0176
Min–max range of strain means92.5   –   103   %
Mean sample size per strain6.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 55 949.0546 17.2555 3.9339 < 0.0001
Residuals 355 1557.1785 4.3864


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
B6D2F1/J f 95.9 2.29   29 0.426 0.0239 91.9, 100.0 -1.26
BXD100/RwwJ f 98.2 0.691   5 0.309 0.00704 97.5, 99.2 0.07
BXD102/RwwJ f 98.3 0.753   5 0.337 0.00766 97.3, 99.2 0.13
BXD11/TyJ f 99.0 0.822   8 0.291 0.0083 97.1, 99.5 0.54
BXD12/TyJ f 99.2 2.91   3 1.68 0.0293 96.4, 102.0 0.66
BXD13/TyJ f 98.5 0.958   6 0.391 0.00973 96.8, 99.3 0.25
BXD14/TyJ f 99.8 2.23   5 0.995 0.0223 97.5, 102.0 1.0
BXD15/TyJ f 98.7 1.01   5 0.452 0.0102 97.7, 100.0 0.37
BXD16/TyJ f 98.6 0.654   5 0.293 0.00664 97.6, 99.2 0.31
BXD18/TyJ f 99.4 2.86   5 1.28 0.0288 94.7, 102.0 0.77
BXD19/TyJ f 101.0 2.81   5 1.26 0.028 96.9, 104.0 1.7
BXD1/TyJ f 97.0 1.77   5 0.792 0.0183 94.1, 98.8 -0.62
BXD20/TyJ f 99.1 1.36   5 0.608 0.0137 97.8, 101.0 0.6
BXD21/TyJ f 95.3 0.96   4 0.48 0.0101 94.7, 96.7 -1.61
BXD23/TyJ f 96.9 2.48   9 0.826 0.0256 93.9, 102.0 -0.68
BXD28/TyJ f 92.5 0.424   4 0.212 0.00459 92.2, 93.1 -3.24
BXD2/TyJ f 94.4 0.953   5 0.426 0.0101 93.3, 95.5 -2.13
BXD31/TyJ f 98.4 2.29   7 0.867 0.0233 94.7, 101.0 0.19
BXD32/TyJ f 95.7 2.03   7 0.766 0.0212 93.5, 98.7 -1.38
BXD34/TyJ f 96.9 0.737   3 0.426 0.00761 96.3, 97.7 -0.68
BXD36/TyJ f 97.8 1.67   5 0.746 0.0171 96.2, 99.8 -0.16
BXD38/TyJ f 97.7 3.72   5 1.66 0.038 92.4, 101.0 -0.22
BXD39/TyJ f 96.5 0.843   8 0.298 0.00874 95.5, 97.9 -0.91
BXD40/TyJ f 99.4 2.4   12 0.692 0.0241 94.7, 103.0 0.77
BXD42/TyJ f 97.8 3.39   4 1.69 0.0346 94.6, 102.0 -0.16
BXD43/RwwJ f 101.0 2.99   7 1.13 0.0295 95.8, 105.0 1.7
BXD44/RwwJ f 98.1 0.735   5 0.329 0.00749 97.1, 99.0 0.02
BXD48a/RwwJ f 98.7 1.61   4 0.804 0.0163 96.9, 100.0 0.37
BXD51/RwwJ f 98.5 1.22   6 0.498 0.0124 96.9, 100.0 0.25
BXD55/RwwJ f 101.0 1.35   5 0.602 0.0133 99.5, 103.0 1.7
BXD56/RwwJ f 97.3 1.37   5 0.612 0.0141 95.8, 99.3 -0.45
BXD5/TyJ f 99.7 2.17   4 1.09 0.0218 97.2, 102.0 0.95
BXD60/RwwJ f 97.1 0.68   5 0.304 0.007 96.7, 98.3 -0.56
BXD61/RwwJ f 95.8 1.65   6 0.672 0.0172 93.3, 98.2 -1.32
BXD62/RwwJ f 97.1 0.689   5 0.308 0.0071 96.6, 98.3 -0.56
BXD65a/RwwJ f 99.6 1.66   4 0.829 0.0166 97.8, 102.0 0.89
BXD65b/RwwJ f 98.8 0.899   5 0.402 0.0091 97.7, 99.6 0.42
BXD65/RwwJ f 97.7 2.54   8 0.899 0.026 92.6, 100.0 -0.22
BXD67/RwwJ f 98.8 0.94   5 0.42 0.00951 97.5, 99.8 0.42
BXD69/RwwJ f 97.1 1.31   5 0.587 0.0135 95.3, 99.0 -0.56
BXD70/RwwJ f 99.1 0.918   5 0.41 0.00926 97.7, 100.0 0.6
BXD71/RwwJ f 99.2 0.245   5 0.11 0.00247 99.0, 99.6 0.66
BXD73a/RwwJ f 96.2 0.949   4 0.474 0.00986 95.0, 97.3 -1.09
BXD73b/RwwJ f 98.2 2.26   5 1.01 0.023 94.7, 101.0 0.07
BXD73/RwwJ f 98.0 1.55   5 0.695 0.0159 96.1, 100.0 -0.04
BXD74/RwwJ f 96.0 6.94   5 3.11 0.0723 83.6, 99.3 -1.2
BXD75/RwwJ f 98.8 1.08   4 0.541 0.0109 97.5, 100.0 0.42
BXD79/RwwJ f 99.1 0.207   5 0.0927 0.00209 98.8, 99.3 0.6
BXD84/RwwJ f 97.0 2.04   5 0.91 0.021 93.8, 99.3 -0.62
BXD87/RwwJ f 99.4 0.335   5 0.15 0.00337 99.0, 99.8 0.77
BXD89/RwwJ f 96.8 1.27   4 0.633 0.0131 95.0, 97.8 -0.74
BXD8/TyJ f 98.3 1.9   8 0.673 0.0194 93.8, 99.7 0.13
BXD98/RwwJ f 103.0 2.11   4 1.06 0.0204 100.0, 105.0 2.86
BXD9/TyJ f 98.9 1.02   5 0.458 0.0103 97.5, 100.0 0.48
C57BL/6J f 98.4 2.16   39 0.347 0.022 94.6, 104.0 0.19
DBA/2J f 97.3 2.36   60 0.304 0.0242 91.5, 103.0 -0.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
B6D2F1/J f 95.8862 0.3889 96.6511 95.1213
BXD100/RwwJ f 98.16 0.9366 100.002 96.318
BXD102/RwwJ f 98.32 0.9366 100.162 96.478
BXD11/TyJ f 98.9875 0.7405 100.4438 97.5312
BXD12/TyJ f 99.1667 1.2092 101.5447 96.7886
BXD13/TyJ f 98.4833 0.855 100.1649 96.8018
BXD14/TyJ f 99.78 0.9366 101.622 97.938
BXD15/TyJ f 98.74 0.9366 100.582 96.898
BXD16/TyJ f 98.56 0.9366 100.402 96.718
BXD18/TyJ f 99.36 0.9366 101.202 97.518
BXD19/TyJ f 100.6 0.9366 102.442 98.758
BXD1/TyJ f 97.0 0.9366 98.842 95.158
BXD20/TyJ f 99.12 0.9366 100.962 97.278
BXD21/TyJ f 95.275 1.0472 97.3345 93.2155
BXD23/TyJ f 96.9333 0.6981 98.3063 95.5604
BXD28/TyJ f 92.5 1.0472 94.5595 90.4405
BXD2/TyJ f 94.44 0.9366 96.282 92.598
BXD31/TyJ f 98.4286 0.7916 99.9854 96.8718
BXD32/TyJ f 95.7429 0.7916 97.2997 94.186
BXD34/TyJ f 96.8667 1.2092 99.2447 94.4886
BXD36/TyJ f 97.76 0.9366 99.602 95.918
BXD38/TyJ f 97.68 0.9366 99.522 95.838
BXD39/TyJ f 96.55 0.7405 98.0063 95.0937
BXD40/TyJ f 99.425 0.6046 100.614 98.236
BXD42/TyJ f 97.8 1.0472 99.8595 95.7405
BXD43/RwwJ f 101.0571 0.7916 102.614 99.5003
BXD44/RwwJ f 98.1 0.9366 99.942 96.258
BXD48a/RwwJ f 98.675 1.0472 100.7345 96.6155
BXD51/RwwJ f 98.5333 0.855 100.2149 96.8518
BXD55/RwwJ f 101.4 0.9366 103.242 99.558
BXD56/RwwJ f 97.34 0.9366 99.182 95.498
BXD5/TyJ f 99.7 1.0472 101.7595 97.6405
BXD60/RwwJ f 97.14 0.9366 98.982 95.298
BXD61/RwwJ f 95.7667 0.855 97.4482 94.0851
BXD62/RwwJ f 97.1 0.9366 98.942 95.258
BXD65a/RwwJ f 99.6 1.0472 101.6595 97.5405
BXD65b/RwwJ f 98.76 0.9366 100.602 96.918
BXD65/RwwJ f 97.725 0.7405 99.1813 96.2687
BXD67/RwwJ f 98.76 0.9366 100.602 96.918
BXD69/RwwJ f 97.14 0.9366 98.982 95.298
BXD70/RwwJ f 99.12 0.9366 100.962 97.278
BXD71/RwwJ f 99.2 0.9366 101.042 97.358
BXD73a/RwwJ f 96.2 1.0472 98.2595 94.1405
BXD73b/RwwJ f 98.2 0.9366 100.042 96.358
BXD73/RwwJ f 98.0 0.9366 99.842 96.158
BXD74/RwwJ f 96.02 0.9366 97.862 94.178
BXD75/RwwJ f 98.775 1.0472 100.8345 96.7155
BXD79/RwwJ f 99.06 0.9366 100.902 97.218
BXD84/RwwJ f 96.96 0.9366 98.802 95.118
BXD87/RwwJ f 99.38 0.9366 101.222 97.538
BXD89/RwwJ f 96.85 1.0472 98.9095 94.7905
BXD8/TyJ f 98.275 0.7405 99.7313 96.8187
BXD98/RwwJ f 103.425 1.0472 105.4845 101.3655
BXD9/TyJ f 98.88 0.9366 100.722 97.038
C57BL/6J f 98.4128 0.3354 99.0724 97.7533
DBA/2J f 97.3318 0.2704 97.8636 96.8001




  GWAS USING LINEAR MIXED MODELS