Project measure / variable:   Rice1   Dusp14

ID, description, units MPD:49210   Dusp14   DUSP14, spectral counts, hair proteomics    
Data set, strains Rice1   inbred   11 strains     sex: both     age: 10-19wks
Procedure proteomic profiling
Ontology mappings

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  STRAIN COMPARISON PLOT
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Rice1 - DUSP14, spectral counts, hair proteomics



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested11 strains11 strains
Mean of the strain means18.9   None 19.2   None
Median of the strain means20.5   None 20.0   None
SD of the strain means± 4.79 ± 3.83
Coefficient of variation (CV)0.254 0.199
Min–max range of strain means10.5   –   24.0   None 12.5   –   24.0   None
Mean sample size per strain2.0   mice 2.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.4545 1.4545 0.2807 0.6015
strain 10 641.9091 64.1909 12.3877 < 0.0001
sex:strain 10 110.5455 11.0545 2.1333 0.0666
Residuals 22 114.0 5.1818


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
C3H/HeJ f 11.0 2.83   2   2.0 0.257 9.0, 13.0 -1.64
C3H/HeJ m 13.0 0.0   2   0.0 0.0 13.0, 13.0 -1.63
C57BL/6J f 22.0 2.83   2   2.0 0.129 20.0, 24.0 0.65
C57BL/6J m 24.0 4.24   2   3.0 0.177 21.0, 27.0 1.25
CAST/EiJ f 10.5 4.95   2   3.5 0.471 7.0, 14.0 -1.75
CAST/EiJ m 12.5 0.707   2   0.5 0.0566 12.0, 13.0 -1.76
DBA/1J f 21.5 2.12   2   1.5 0.0987 20.0, 23.0 0.55
DBA/1J m 22.0 0.0   2   0.0 0.0 22.0, 22.0 0.72
MRL/MpJ f 20.5 0.707   2   0.5 0.0345 20.0, 21.0 0.34
MRL/MpJ m 20.0 0.0   2   0.0 0.0 20.0, 20.0 0.2
MRL/MpJ Faslpr-Foxq1sa-J/J f 15.0 1.41   2   1.0 0.0943 14.0, 16.0 -0.81
MRL/MpJ Faslpr-Foxq1sa-J/J m 20.5 2.12   2   1.5 0.103 19.0, 22.0 0.33
NOD/ShiLtJ f 23.5 2.12   2   1.5 0.0903 22.0, 25.0 0.97
NOD/ShiLtJ m 19.5 0.707   2   0.5 0.0363 19.0, 20.0 0.07
NZW/LacJ f 22.5 2.12   2   1.5 0.0943 21.0, 24.0 0.76
NZW/LacJ m 24.0 0.0   2   0.0 0.0 24.0, 24.0 1.25
SB/LeJ f 19.5 2.12   2   1.5 0.109 18.0, 21.0 0.13
SB/LeJ m 20.5 0.707   2   0.5 0.0345 20.0, 21.0 0.33
STOCK a/a Tmem79ma Flgft/J f 24.0 1.41   2   1.0 0.0589 23.0, 25.0 1.07
STOCK a/a Tmem79ma Flgft/J m 17.0 1.41   2   1.0 0.0832 16.0, 18.0 -0.58
WSB/EiJ f 17.5 0.707   2   0.5 0.0404 17.0, 18.0 -0.28
WSB/EiJ m 18.5 4.95   2   3.5 0.268 15.0, 22.0 -0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
C3H/HeJ f 11.0 1.6096 14.3382 7.6618
C3H/HeJ m 13.0 1.6096 16.3382 9.6618
C57BL/6J f 22.0 1.6096 25.3382 18.6618
C57BL/6J m 24.0 1.6096 27.3382 20.6618
CAST/EiJ f 10.5 1.6096 13.8382 7.1618
CAST/EiJ m 12.5 1.6096 15.8382 9.1618
DBA/1J f 21.5 1.6096 24.8382 18.1618
DBA/1J m 22.0 1.6096 25.3382 18.6618
MRL/MpJ f 20.5 1.6096 23.8382 17.1618
MRL/MpJ m 20.0 1.6096 23.3382 16.6618
MRL/MpJ Faslpr-Foxq1sa-J/J f 15.0 1.6096 18.3382 11.6618
MRL/MpJ Faslpr-Foxq1sa-J/J m 20.5 1.6096 23.8382 17.1618
NOD/ShiLtJ f 23.5 1.6096 26.8382 20.1618
NOD/ShiLtJ m 19.5 1.6096 22.8382 16.1618
NZW/LacJ f 22.5 1.6096 25.8382 19.1618
NZW/LacJ m 24.0 1.6096 27.3382 20.6618
SB/LeJ f 19.5 1.6096 22.8382 16.1618
SB/LeJ m 20.5 1.6096 23.8382 17.1618
STOCK a/a Tmem79ma Flgft/J f 24.0 1.6096 27.3382 20.6618
STOCK a/a Tmem79ma Flgft/J m 17.0 1.6096 20.3382 13.6618
WSB/EiJ f 17.5 1.6096 20.8382 14.1618
WSB/EiJ m 18.5 1.6096 21.8382 15.1618


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
C3H/HeJ both 12.0 1.1382 14.3604 9.6396
C57BL/6J both 23.0 1.1382 25.3604 20.6396
CAST/EiJ both 11.5 1.1382 13.8604 9.1396
DBA/1J both 21.75 1.1382 24.1104 19.3896
MRL/MpJ both 20.25 1.1382 22.6104 17.8896
MRL/MpJ Faslpr-Foxq1sa-J/J both 17.75 1.1382 20.1104 15.3896
NOD/ShiLtJ both 21.5 1.1382 23.8604 19.1396
NZW/LacJ both 23.25 1.1382 25.6104 20.8896
SB/LeJ both 20.0 1.1382 22.3604 17.6396
STOCK a/a Tmem79ma Flgft/J both 20.5 1.1382 22.8604 18.1396
WSB/EiJ both 18.0 1.1382 20.3604 15.6396




  GWAS USING LINEAR MIXED MODELS