Project measure / variable:   Hackstein1   T_gd

ID, description, units MPD:49121   T_gd   bronchoalveolar lavage CD3+ gamma-delta T cells (percentage of CD45+ cells)   [%]  
Data set, strains Hackstein1   inbred   5 strains     sex: m     age: 7-11wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Hackstein1 - bronchoalveolar lavage CD3+ gamma-delta T cells (percentage of CD45+ cells)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means0.620   %
Median of the strain means0.660   %
SD of the strain means± 0.123
Coefficient of variation (CV)0.198
Min–max range of strain means0.455   –   0.744   %
Mean sample size per strain8.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 0.5137 0.1284 4.7925 0.0031
Residuals 38 1.0183 0.0268


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPasCrl m 0.66 0.121   8 0.0428 0.183 0.39, 0.8 0.33
BALB/cAnNCrl m 0.53 0.076   9 0.0253 0.143 0.43, 0.63 -0.73
C3H/HeNCrl m 0.709 0.259   9 0.0862 0.365 0.37, 1.06 0.73
C57BL/6NCrl m 0.455 0.184   8 0.0651 0.405 0.15, 0.72 -1.34
DBA/2NCrl m 0.744 0.11   9 0.0367 0.148 0.59, 0.88 1.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPasCrl m 0.66 0.0579 0.7772 0.5428
BALB/cAnNCrl m 0.53 0.0546 0.6405 0.4195
C3H/HeNCrl m 0.7089 0.0546 0.8194 0.5984
C57BL/6NCrl m 0.455 0.0579 0.5722 0.3378
DBA/2NCrl m 0.7444 0.0546 0.8549 0.634




GWAS analysis not available: SNP data is not available for enough strains (at least 4)