Project measure / variable:   Hackstein1   T_CD4_foxp3

ID, description, units MPD:49119   T_CD4_foxp3   bronchoalveolar lavage CD3+ CD4+ CD25hi Foxp3+ Treg cells (percentage of CD45+ cells)   [%]  
Data set, strains Hackstein1   inbred   5 strains     sex: m     age: 7-11wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Hackstein1 - bronchoalveolar lavage CD3+ CD4+ CD25hi Foxp3+ Treg cells (percentage of CD45+ cells)

BALB/cAnNCrlC57BL/6NCrl129S2/SvPasCrlC3H/HeNCrlDBA/2NCrl % 0.300.350.400.450.500.550.600.650.700.75femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means0.512   %
Median of the strain means0.600   %
SD of the strain means± 0.154
Coefficient of variation (CV)0.301
Min–max range of strain means0.326   –   0.662   %
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 0.4769 0.1192 25.1506 < 0.0001
Residuals 20 0.0948 0.0047


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S2/SvPasCrl m 0.6 0.0604   5 0.027 0.101 0.51, 0.66 0.57
BALB/cAnNCrl m 0.662 0.0701   5 0.0314 0.106 0.58, 0.77 0.97
C3H/HeNCrl m 0.366 0.0391   5 0.0175 0.107 0.33, 0.43 -0.95
C57BL/6NCrl m 0.608 0.111   5 0.0498 0.183 0.49, 0.77 0.62
DBA/2NCrl m 0.326 0.0344   5 0.0154 0.105 0.28, 0.36 -1.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPasCrl m 0.6 0.0308 0.6642 0.5358
BALB/cAnNCrl m 0.662 0.0308 0.7262 0.5978
C3H/HeNCrl m 0.366 0.0308 0.4302 0.3018
C57BL/6NCrl m 0.608 0.0308 0.6722 0.5438
DBA/2NCrl m 0.326 0.0308 0.3902 0.2618




GWAS analysis not available: SNP data is not available for enough strains (at least 4)