Project measure / variable:   Hackstein1   T_CD4_25

ID, description, units MPD:49117   T_CD4_25   bronchoalveolar lavage CD3+ CD4+ CD25+ T cells (percentage of CD45+ cells)   [%]  
Data set, strains Hackstein1   inbred   5 strains     sex: m     age: 7-11wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Hackstein1 - bronchoalveolar lavage CD3+ CD4+ CD25+ T cells (percentage of CD45+ cells)

129S2/SvPasCrlBALB/cAnNCrlDBA/2NCrlC3H/HeNCrlC57BL/6NCrl % 0.40.60.81.01.21.41.6femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means1.02   %
Median of the strain means1.02   %
SD of the strain means± 0.207
Coefficient of variation (CV)0.202
Min–max range of strain means0.789   –   1.28   %
Mean sample size per strain8.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 1.3875 0.3469 6.359 0.0005
Residuals 37 2.0183 0.0545


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S2/SvPasCrl m 1.28 0.378   7 0.143 0.295 0.86, 1.72 1.25
BALB/cAnNCrl m 1.17 0.103   9 0.0345 0.0882 1.05, 1.34 0.71
C3H/HeNCrl m 0.855 0.263   8 0.0929 0.307 0.44, 1.17 -0.81
C57BL/6NCrl m 0.789 0.122   9 0.0407 0.155 0.53, 0.96 -1.13
DBA/2NCrl m 1.02 0.244   9 0.0812 0.239 0.62, 1.4 -0.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPasCrl m 1.2814 0.0883 1.4603 1.1026
BALB/cAnNCrl m 1.1733 0.0779 1.3311 1.0156
C3H/HeNCrl m 0.855 0.0826 1.0223 0.6877
C57BL/6NCrl m 0.7889 0.0779 0.9466 0.6311
DBA/2NCrl m 1.0178 0.0779 1.1755 0.86




GWAS analysis not available: SNP data is not available for enough strains (at least 4)