Project measure / variable:   Hackstein1   NEUT

ID, description, units MPD:49109   NEUT   bronchoalveolar lavage neutrophils (percentage of CD45+ cells)   [%]  
Data set, strains Hackstein1   inbred   5 strains     sex: m     age: 7-11wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Hackstein1 - bronchoalveolar lavage neutrophils (percentage of CD45+ cells)

DBA/2NCrlC3H/HeNCrlC57BL/6NCrlBALB/cAnNCrl129S2/SvPasCrl % 468101214161820femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means7.82   %
Median of the strain means7.03   %
SD of the strain means± 2.00
Coefficient of variation (CV)0.256
Min–max range of strain means5.62   –   10.0   %
Mean sample size per strain8.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 140.4611 35.1153 4.3895 0.005
Residuals 39 311.992 7.9998


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S2/SvPasCrl m 5.62 1.8   8 0.636 0.32 3.65, 9.63 -1.1
BALB/cAnNCrl m 6.57 1.83   9 0.611 0.279 4.2, 9.52 -0.62
C3H/HeNCrl m 9.88 1.75   9 0.584 0.177 7.12, 12.5 1.03
C57BL/6NCrl m 7.03 5.08   9 1.69 0.723 3.93, 19.9 -0.39
DBA/2NCrl m 10.0 1.99   9 0.663 0.198 8.16, 13.4 1.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPasCrl m 5.615 1.0 7.6377 3.5923
BALB/cAnNCrl m 6.5689 0.9428 8.4759 4.6619
C3H/HeNCrl m 9.8767 0.9428 11.7837 7.9697
C57BL/6NCrl m 7.0267 0.9428 8.9337 5.1197
DBA/2NCrl m 10.0278 0.9428 11.9348 8.1208




GWAS analysis not available: SNP data is not available for enough strains (at least 4)