Project measure / variable:   Hackstein1   MAC

ID, description, units MPD:49108   MAC   bronchoalveolar lavage Siglec F+ F4/80+ macrophages (percentage of CD45+ cells)   [%]  
Data set, strains Hackstein1   inbred   5 strains     sex: m     age: 7-11wks
Procedure immune cell quantification
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  STRAIN COMPARISON PLOT
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Hackstein1 - bronchoalveolar lavage Siglec F+ F4/80+ macrophages (percentage of CD45+ cells)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means15.5   %
Median of the strain means15.8   %
SD of the strain means± 2.26
Coefficient of variation (CV)0.145
Min–max range of strain means12.3   –   18.4   %
Mean sample size per strain8.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 179.7709 44.9427 1.1079 0.3666
Residuals 39 1582.0537 40.5655


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPasCrl m 16.5 6.76   8 2.39 0.41 5.79, 24.1 0.43
BALB/cAnNCrl m 18.4 5.62   9 1.87 0.305 9.08, 25.9 1.27
C3H/HeNCrl m 15.8 6.54   9 2.18 0.413 7.99, 25.2 0.12
C57BL/6NCrl m 14.7 7.68   9 2.56 0.521 7.31, 32.5 -0.37
DBA/2NCrl m 12.3 4.95   9 1.65 0.401 4.75, 19.1 -1.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPasCrl m 16.4675 2.2518 21.0222 11.9128
BALB/cAnNCrl m 18.4111 2.123 22.7054 14.1169
C3H/HeNCrl m 15.8489 2.123 20.1431 11.5546
C57BL/6NCrl m 14.7322 2.123 19.0265 10.438
DBA/2NCrl m 12.3433 2.123 16.6376 8.0491




GWAS analysis not available: SNP data is not available for enough strains (at least 4)