Project measure / variable:   Hackstein1   BAL_MAC

ID, description, units MPD:49102   BAL_MAC   bronchoalveolar lavage macrophages (percentage of leukocytes)   [%]  
Data set, strains Hackstein1   inbred   5 strains     sex: m     age: 7-11wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Hackstein1 - bronchoalveolar lavage macrophages (percentage of leukocytes)

C57BL/6NCrlC3H/HeNCrl129S2/SvPasCrlDBA/2NCrlBALB/cAnNCrl % 556065707580859095100femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means88.0   %
Median of the strain means89.3   %
SD of the strain means± 2.73
Coefficient of variation (CV)0.0311
Min–max range of strain means84.4   –   91.0   %
Mean sample size per strain5.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 150.7339 37.6835 0.319 0.8619
Residuals 20 2362.9024 118.1451


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S2/SvPasCrl m 89.3 10.8   5 4.81 0.121 70.5, 96.2 0.46
BALB/cAnNCrl m 84.4 16.4   5 7.32 0.194 56.3, 95.9 -1.33
C3H/HeNCrl m 89.5 5.33   5 2.38 0.0595 83.9, 98.3 0.53
C57BL/6NCrl m 91.0 10.3   5 4.62 0.113 72.7, 96.8 1.08
DBA/2NCrl m 86.0 8.49   5 3.8 0.0987 76.0, 96.0 -0.75


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPasCrl m 89.31 4.861 99.4498 79.1702
BALB/cAnNCrl m 84.366 4.861 94.5058 74.2262
C3H/HeNCrl m 89.496 4.861 99.6358 79.3562
C57BL/6NCrl m 91.03 4.861 101.1698 80.8902
DBA/2NCrl m 86.046 4.861 96.1858 75.9062




GWAS analysis not available: SNP data is not available for enough strains (at least 4)