Project measure / variable:   Hackstein1   BAL

ID, description, units MPD:49101   BAL   bronchoalveolar lavage total leukocyte count (x 103)   [n]  
Data set, strains Hackstein1   inbred   5 strains     sex: m     age: 7-11wks
Procedure immune cell quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Hackstein1 - bronchoalveolar lavage total leukocyte count (x 103)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means229   n
Median of the strain means221   n
SD of the strain means± 40.4
Coefficient of variation (CV)0.176
Min–max range of strain means186   –   283   n
Mean sample size per strain5.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 33613.1662 8403.2916 0.1865 0.9428
Residuals 21 946201.9203 45057.2343


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S2/SvPasCrl m 257.0 327.0   5 146.0 1.27 28.0, 825.0 0.69
BALB/cAnNCrl m 199.0 217.0   6 88.8 1.09 50.0, 637.0 -0.75
C3H/HeNCrl m 283.0 183.0   5 81.7 0.644 110.0, 550.0 1.33
C57BL/6NCrl m 186.0 72.4   5 32.4 0.39 84.0, 275.0 -1.07
DBA/2NCrl m 221.0 179.0   5 80.1 0.811 5.2, 500.0 -0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S2/SvPasCrl m 256.6 94.9286 454.0149 59.1851
BALB/cAnNCrl m 199.0833 86.6576 379.2977 18.869
C3H/HeNCrl m 283.4 94.9286 480.8149 85.9851
C57BL/6NCrl m 185.8 94.9286 383.2149 0.0
DBA/2NCrl m 220.84 94.9286 418.2549 23.4251




GWAS analysis not available: SNP data is not available for enough strains (at least 4)