Project measure / variable:   Haston1   survival

ID, description, units MPD:48801   survival   number of days in the absence of respiratory distress   [d]  
radiation study
Data set, strains Haston1   inbred   26 strains     sex: both     age: 15-36wks
Procedure health assessment
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  STRAIN COMPARISON PLOT
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Haston1 - number of days in the absence of respiratory distress



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested20 strains16 strains
Mean of the strain means114   d 128   d
Median of the strain means116   d 120   d
SD of the strain means± 31.9 ± 40.6
Coefficient of variation (CV)0.279 0.318
Min–max range of strain means64.4   –   171   d 75.7   –   182   d
Mean sample size per strain7.6   mice 5.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1816.2748 1816.2748 5.6253 0.0193
strain 9 187482.9015 20831.4335 64.518 < 0.0001
sex:strain 9 6565.0003 729.4445 2.2592 0.0225
Residuals 122 39391.098 322.8779


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 137.0 20.2   10 6.4 0.147 117.0, 176.0 0.72
129S1/SvImJ m 164.0 11.1   7 4.2 0.0676 144.0, 179.0 0.9
A/J f 171.0 26.1   5 11.7 0.153 124.0, 183.0 1.79
A/J m 145.0 19.5   6 7.97 0.135 120.0, 171.0 0.43
AKR/J f 78.2 9.58   9 3.19 0.122 69.0, 97.0 -1.13
AKR/J m 92.2 19.7   6 8.05 0.214 77.0, 129.0 -0.87
BALB/cJ f 112.0 23.2   6 9.48 0.207 83.0, 142.0 -0.07
BTBR T+ Itpr3tf/J f 163.0 20.4   7 7.71 0.125 129.0, 185.0 1.54
BTBR T+ Itpr3tf/J m 182.0 0.0   7 0.0 0.0 182.0, 182.0 1.34
BUB/BnJ f 109.0 30.4   8 10.7 0.279 93.0, 183.0 -0.16
C3H/HeJ f 80.8 3.49   10 1.1 0.0432 77.0, 84.0 -1.04
C57BL/6J f 158.0 21.0   9 7.01 0.133 131.0, 182.0 1.38
C57BL/6J m 170.0 21.4   8 7.58 0.126 131.0, 183.0 1.04
C57BLKS/J m 136.0 10.4   5 4.64 0.0764 123.0, 150.0 0.21
C58/J f 126.0 35.7   9 11.9 0.283 98.0, 182.0 0.37
CBA/J m 182.0 0.0   5 0.0 0.0 182.0, 182.0 1.34
CE/J f 121.0 50.5   8 17.8 0.417 83.0, 182.0 0.22
DBA/2J f 88.3 38.6   10 12.2 0.437 61.0, 182.0 -0.81
DBA/2J m 82.5 7.41   10 2.34 0.0898 71.0, 98.0 -1.11
FVB/NJ f 90.8 8.98   9 2.99 0.099 77.0, 102.0 -0.73
FVB/NJ m 105.0 7.72   7 2.92 0.0737 95.0, 113.0 -0.56
I/LnJ f 139.0 30.4   10 9.6 0.219 104.0, 183.0 0.78
KK/HlJ f 68.2 3.5   4 1.75 0.0513 63.0, 70.0 -1.44
KK/HlJ m 75.7 5.28   6 2.16 0.0698 68.0, 83.0 -1.28
LG/J f 64.4 4.97   10 1.57 0.0772 57.0, 70.0 -1.56
LP/J m 182.0 0.0   3 0.0 0.0 182.0, 182.0 1.34
MA/MyJ f 138.0 30.4   7 11.5 0.22 99.0, 182.0 0.75
NOD/ShiLtJ f 93.8 12.4   6 5.06 0.132 74.0, 105.0 -0.64
NOD/ShiLtJ m 96.7 12.8   7 4.82 0.132 82.0, 123.0 -0.76
NON/ShiLtJ f 129.0 11.5   3 6.67 0.0897 122.0, 142.0 0.47
NZB/BlNJ m 82.3 2.31   3 1.33 0.028 81.0, 85.0 -1.12
NZW/LacJ f 86.0 6.06   4 3.03 0.0704 80.0, 94.0 -0.88
NZW/LacJ m 102.0 19.2   5 8.57 0.187 74.0, 120.0 -0.63
PL/J f 128.0 15.8   5 7.08 0.123 106.0, 148.0 0.44
SJL/J m 155.0 46.2   3 26.7 0.297 102.0, 182.0 0.67
SM/J m 90.2 27.3   5 12.2 0.303 52.0, 129.0 -0.92


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 137.3 5.6822 148.5486 126.0514
129S1/SvImJ m 164.4286 6.7916 177.8732 150.984
A/J f 170.6 8.0359 186.5079 154.6921
A/J m 144.8333 7.3357 159.3551 130.3115
AKR/J f 78.2222 5.9896 90.0792 66.3652
AKR/J m 92.1667 7.3357 106.6885 77.6449
BTBR T+ Itpr3tf/J f 162.8571 6.7916 176.3017 149.4126
BTBR T+ Itpr3tf/J m 182.0 6.7916 195.4446 168.5554
C57BL/6J f 158.0 5.9896 169.857 146.143
C57BL/6J m 169.875 6.3529 182.4513 157.2987
DBA/2J f 88.3 5.6822 99.5486 77.0514
DBA/2J m 82.5 5.6822 93.7486 71.2514
FVB/NJ f 90.7778 5.9896 102.6348 78.9208
FVB/NJ m 104.7143 6.7916 118.1589 91.2697
KK/HlJ f 68.25 8.9844 86.0355 50.4645
KK/HlJ m 75.6667 7.3357 90.1885 61.1449
NOD/ShiLtJ f 93.8333 7.3357 108.3551 79.3115
NOD/ShiLtJ m 96.7143 6.7916 110.1589 83.2697
NZW/LacJ f 86.0 8.9844 103.7855 68.2145
NZW/LacJ m 102.4 8.0359 118.3079 86.4921


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 150.8643 4.4276 159.6291 142.0995
A/J both 157.7167 5.4403 168.4863 146.947
AKR/J both 85.1944 4.7352 94.5682 75.8207
BTBR T+ Itpr3tf/J both 172.4286 4.8024 181.9353 162.9218
C57BL/6J both 163.9375 4.3656 172.5797 155.2953
DBA/2J both 85.4 4.0179 93.3539 77.4461
FVB/NJ both 97.746 4.5277 106.7091 88.783
KK/HlJ both 71.9583 5.7994 83.4388 60.4778
NOD/ShiLtJ both 95.2738 4.9985 105.1688 85.3789
NZW/LacJ both 94.2 6.0269 106.1309 82.2691




  GWAS USING LINEAR MIXED MODELS