Phenotype measure:   Schauwecker1   latency

ID, description, units MPD:47702   latency   latency to onset of stage 4 status epilepticus seizures   [min]
pilocarpine study
Data set, strains Schauwecker1   inbred   8 strains     sex: m     age: 8-10wks
Procedure health assessment
Ontology mappings


  STRAIN COMPARISON PLOT
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Schauwecker1 - latency to onset of stage 4 status epilepticus seizures



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means23.5   min
Median of the strain means26.8   min
SD of the strain means± 7.38
Coefficient of variation (CV)0.314
Min–max range of strain means14.6   –   31.6   min
Mean sample size per strain4.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 1623.7412 231.963 1.1198 0.3808
Residuals 26 5385.7 207.1423


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129T2/SvEmsJ m 29.0 13.0   4 6.52 0.45 11.0, 40.0 0.74
BALB/cByJ m 27.4 18.7   5 8.38 0.684 10.0, 56.0 0.53
BALB/cJ m 14.8 7.09   5 3.17 0.479 6.0, 25.0 -1.18
C3H/HeJ m 29.5 34.6   2   24.5 1.17 5.0, 54.0 0.81
C57BL/6J m 26.2 6.5   5 2.91 0.248 15.0, 30.0 0.36
CBA/J m 31.6 20.8   5 9.28 0.657 14.0, 58.0 1.1
DBA/2J m 15.0 7.0   3 4.04 0.467 7.0, 20.0 -1.15
FVB/NJ m 14.6 4.51   5 2.01 0.309 8.0, 20.0 -1.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129T2/SvEmsJ m 29.0 7.1962 43.792 14.208
BALB/cByJ m 27.4 6.4365 40.6304 14.1696
BALB/cJ m 14.8 6.4365 28.0304 1.5696
C3H/HeJ m 29.5 10.177 50.4191 8.5809
C57BL/6J m 26.2 6.4365 39.4304 12.9696
CBA/J m 31.6 6.4365 44.8304 18.3696
DBA/2J m 15.0 8.3095 32.0804 0.0
FVB/NJ m 14.6 6.4365 27.8304 1.3696




  GENOME-WIDE ASSOCIATION (GWAS) STATIC PLOT
Plot generated with EMMA / pyLMM using 132K SNP array. Click on plot to view at larger size.