Phenotype measure:   Chesler4   TS_latency_immobile

ID, description, units MPD:47028   TS_latency_immobile   average latency to first immobility episode, 5 min test   [s]
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure tail suspension test
Ontology mappings

Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means1.36   s 3.26   s
Median of the strain means0.949   s 3.04   s
SD of the strain means± 1.05 ± 2.41
Coefficient of variation (CV)0.774 0.739
Min–max range of strain means0.341   –   3.62   s 0.185   –   8.57   s
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 11.1915 11.1915 0.4978 0.4809
strain 8 333.5341 41.6918 1.8543 0.0659
sex:strain 8 308.3544 38.5443 1.7143 0.0934
Residuals 383 8611.2853 22.4838


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.11 2.01   7 0.758 0.949 0.13, 5.21 0.71
129S1/SvImJ m 8.57 13.2   8 4.68 1.54 0.33, 40.2 2.2
A/J f 1.48 2.12   8 0.748 1.43 0.07, 6.47 0.11
A/J m 1.52 3.6   8 1.27 2.37 0.07, 10.4 -0.72
C57BL/6J f 1.91 3.13   8 1.11 1.64 0.07, 9.34 0.52
C57BL/6J m 2.36 1.53   8 0.541 0.648 0.2, 4.8 -0.37
CAST/EiJ f 0.341 0.313   8 0.111 0.918 0.07, 0.93 -0.97
CAST/EiJ m 0.185 0.192   4 0.096 1.04 0.07, 0.47 -1.28
J:DO f 3.62 4.78   143 0.4 1.32 0.07, 26.6 2.15
J:DO m 3.04 4.38   137 0.374 1.44 0.07, 23.5 -0.09
NOD/ShiLtJ f 0.949 1.19   8 0.421 1.25 0.2, 3.8 -0.39
NOD/ShiLtJ m 4.26 4.09   8 1.45 0.959 0.2, 11.8 0.41
NZO/HlLtJ f 0.584 0.525   8 0.186 0.9 0.07, 1.6 -0.74
NZO/HlLtJ m 3.62 5.27   8 1.86 1.46 0.07, 15.3 0.15
PWK/PhJ f 0.623 1.38   7 0.52 2.21 0.07, 3.74 -0.7
PWK/PhJ m 1.57 3.09   7 1.17 1.97 0.07, 8.48 -0.7
WSB/EiJ f 0.628 0.977   8 0.345 1.56 0.07, 2.54 -0.7
WSB/EiJ m 4.22 11.3   8 4.0 2.68 0.07, 32.2 0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.1143 1.7922 5.6381 0.0
129S1/SvImJ m 8.5675 1.6764 11.8637 5.2713
A/J f 1.4763 1.6764 4.7724 0.0
A/J m 1.52 1.6764 4.8162 0.0
C57BL/6J f 1.91 1.6764 5.2062 0.0
C57BL/6J m 2.36 1.6764 5.6562 0.0
CAST/EiJ f 0.3413 1.6764 3.6374 0.0
CAST/EiJ m 0.185 2.3709 4.8465 0.0
J:DO f 3.6213 0.3965 4.401 2.8417
J:DO m 3.0353 0.4051 3.8318 2.2387
NOD/ShiLtJ f 0.9488 1.6764 4.2449 0.0
NOD/ShiLtJ m 4.2638 1.6764 7.5599 0.9676
NZO/HlLtJ f 0.5838 1.6764 3.8799 0.0
NZO/HlLtJ m 3.6213 1.6764 6.9174 0.3251
PWK/PhJ f 0.6229 1.7922 4.1466 0.0
PWK/PhJ m 1.5657 1.7922 5.0895 0.0
WSB/EiJ f 0.6275 1.6764 3.9237 0.0
WSB/EiJ m 4.2225 1.6764 7.5187 0.9263


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 5.3409 1.227 7.7535 2.9283
A/J both 1.4981 1.1854 3.8289 0.0
C57BL/6J both 2.135 1.1854 4.4658 0.0
CAST/EiJ both 0.2631 1.4518 3.1177 0.0
J:DO both 3.3283 0.2834 3.8856 2.771
NOD/ShiLtJ both 2.6063 1.1854 4.937 0.2755
NZO/HlLtJ both 2.1025 1.1854 4.4333 0.0
PWK/PhJ both 1.0943 1.2673 3.586 0.0
WSB/EiJ both 2.425 1.1854 4.7558 0.0942




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA