Phenotype measure:   Chesler4   TS_time_immobile

ID, description, units MPD:47027   TS_time_immobile   average time immobile, 5 min test   [s]
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure tail suspension test
Ontology mappings

Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means139   s 130   s
Median of the strain means138   s 139   s
SD of the strain means± 26.7 ± 32.5
Coefficient of variation (CV)0.192 0.249
Min–max range of strain means108   –   190   s 58.0   –   172   s
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 16.3679 16.3679 0.0051 0.9433
strain 8 141111.6152 17638.9519 5.4498 < 0.0001
sex:strain 8 24679.757 3084.9696 0.9531 0.4726
Residuals 383 1239630.5436 3236.6333


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 147.0 56.8   7 21.5 0.385 33.6, 197.0 0.28
129S1/SvImJ m 116.0 59.7   8 21.1 0.513 28.4, 199.0 -0.44
A/J f 138.0 60.8   8 21.5 0.443 61.2, 237.0 -0.05
A/J m 150.0 60.8   8 21.5 0.405 70.5, 240.0 0.6
C57BL/6J f 190.0 18.2   8 6.44 0.0961 162.0, 212.0 1.89
C57BL/6J m 172.0 48.8   8 17.3 0.283 69.5, 221.0 1.28
CAST/EiJ f 144.0 95.3   8 33.7 0.66 30.2, 291.0 0.17
CAST/EiJ m 150.0 74.3   4 37.2 0.495 50.6, 223.0 0.6
J:DO f 108.0 46.5   143 3.89 0.429 10.1, 220.0 -1.18
J:DO m 114.0 52.5   137 4.49 0.46 10.6, 266.0 -0.51
NOD/ShiLtJ f 125.0 66.9   8 23.7 0.537 28.9, 216.0 -0.54
NOD/ShiLtJ m 143.0 47.4   8 16.8 0.332 103.0, 254.0 0.39
NZO/HlLtJ f 108.0 79.4   8 28.1 0.733 16.1, 206.0 -1.18
NZO/HlLtJ m 58.0 49.2   8 17.4 0.848 3.27, 155.0 -2.23
PWK/PhJ f 128.0 91.5   7 34.6 0.716 50.4, 259.0 -0.43
PWK/PhJ m 139.0 90.3   7 34.1 0.65 47.5, 285.0 0.26
WSB/EiJ f 167.0 112.0   8 39.6 0.671 24.9, 288.0 1.03
WSB/EiJ m 132.0 98.6   8 34.9 0.747 2.14, 279.0 0.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 147.4343 21.5029 189.7129 105.1557
129S1/SvImJ m 116.4425 20.1142 155.9905 76.8945
A/J f 137.5037 20.1142 177.0517 97.9558
A/J m 149.9013 20.1142 189.4492 110.3533
C57BL/6J f 189.7063 20.1142 229.2542 150.1583
C57BL/6J m 172.3975 20.1142 211.9455 132.8495
CAST/EiJ f 144.41 20.1142 183.958 104.862
CAST/EiJ m 150.285 28.4457 206.2143 94.3557
J:DO f 108.3371 4.7575 117.6912 98.983
J:DO m 114.2458 4.8606 123.8025 104.689
NOD/ShiLtJ f 124.575 20.1142 164.123 85.027
NOD/ShiLtJ m 143.0013 20.1142 182.5492 103.4533
NZO/HlLtJ f 108.4162 20.1142 147.9642 68.8683
NZO/HlLtJ m 57.9588 20.1142 97.5067 18.4108
PWK/PhJ f 127.8714 21.5029 170.15 85.5928
PWK/PhJ m 138.8643 21.5029 181.1429 96.5857
WSB/EiJ f 166.7675 20.1142 206.3155 127.2195
WSB/EiJ m 132.0412 20.1142 171.5892 92.4933


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 131.9384 14.7221 160.8846 102.9922
A/J both 143.7025 14.2229 171.6672 115.7378
C57BL/6J both 181.0519 14.2229 209.0165 153.0872
CAST/EiJ both 147.3475 17.4194 181.5971 113.0979
J:DO both 111.2914 3.4007 117.9778 104.6051
NOD/ShiLtJ both 133.7881 14.2229 161.7528 105.8235
NZO/HlLtJ both 83.1875 14.2229 111.1522 55.2228
PWK/PhJ both 133.3679 15.2049 163.2633 103.4724
WSB/EiJ both 149.4044 14.2229 177.369 121.4397




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA