Phenotype measure:   Chesler4   TS_frequency_climbing

ID, description, units MPD:47026   TS_frequency_climbing   average frequency climbing, 5 min test   [n]
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure tail suspension test
Ontology mappings

Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means3.96   n 2.05   n
Median of the strain means0   n 0.125   n
SD of the strain means± 5.98 ± 3.67
Coefficient of variation (CV)1.51 1.79
Min–max range of strain means0   –   14.8   n 0   –   11.0   n
Mean sample size per strain7.9   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 203.3433 203.3433 11.0061 0.001
strain 8 2840.6388 355.0798 19.219 < 0.0001
sex:strain 8 383.059 47.8824 2.5917 0.0091
Residuals 383 7076.0961 18.4754


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0 0.0   7 0.0 0.0 -0.66
129S1/SvImJ m 0.0 0.0   8 0.0 0.0 -0.56
A/J f 0.0 0.0   8 0.0 0.0 -0.66
A/J m 0.0 0.0   8 0.0 0.0 -0.56
C57BL/6J f 0.0 0.0   8 0.0 0.0 -0.66
C57BL/6J m 0.125 0.354   8 0.125 2.83 -0.52
CAST/EiJ f 6.0 1.51   8 0.535 0.252 4.0, 8.0 0.34
CAST/EiJ m 2.25 3.3   4 1.65 1.47 0.05
J:DO f 1.83 6.12   143 0.512 3.34 -0.36
J:DO m 0.693 3.11   137 0.266 4.48 -0.37
NOD/ShiLtJ f 0.0 0.0   8 0.0 0.0 -0.66
NOD/ShiLtJ m 0.0 0.0   8 0.0 0.0 -0.56
NZO/HlLtJ f 0.0 0.0   8 0.0 0.0 -0.66
NZO/HlLtJ m 0.0 0.0   8 0.0 0.0 -0.56
PWK/PhJ f 13.0 4.73   7 1.79 0.364 5.0, 20.0 1.51
PWK/PhJ m 11.0 1.91   7 0.724 0.174 8.0, 14.0 2.44
WSB/EiJ f 14.8 4.23   8 1.5 0.287 9.0, 23.0 1.81
WSB/EiJ m 4.38 3.96   8 1.4 0.906 0.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0 1.6246 3.1943 -3.1943
129S1/SvImJ m 0.0 1.5197 2.988 -2.988
A/J f 0.0 1.5197 2.988 -2.988
A/J m 0.0 1.5197 2.988 -2.988
C57BL/6J f 0.0 1.5197 2.988 -2.988
C57BL/6J m 0.125 1.5197 3.113 -2.863
CAST/EiJ f 6.0 1.5197 8.988 3.012
CAST/EiJ m 2.25 2.1492 6.4756 -1.9756
J:DO f 1.8322 0.3594 2.5389 1.1254
J:DO m 0.6934 0.3672 1.4155 -0.0286
NOD/ShiLtJ f 0.0 1.5197 2.988 -2.988
NOD/ShiLtJ m 0.0 1.5197 2.988 -2.988
NZO/HlLtJ f 0.0 1.5197 2.988 -2.988
NZO/HlLtJ m 0.0 1.5197 2.988 -2.988
PWK/PhJ f 13.0 1.6246 16.1943 9.8057
PWK/PhJ m 11.0 1.6246 14.1943 7.8057
WSB/EiJ f 14.75 1.5197 17.738 11.762
WSB/EiJ m 4.375 1.5197 7.363 1.387


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.0 1.1123 2.187 -2.187
A/J both 0.0 1.0746 2.1128 -2.1128
C57BL/6J both 0.0625 1.0746 2.1753 -2.0503
CAST/EiJ both 4.125 1.3161 6.7127 1.5373
J:DO both 1.2628 0.2569 1.768 0.7576
NOD/ShiLtJ both 0.0 1.0746 2.1128 -2.1128
NZO/HlLtJ both 0.0 1.0746 2.1128 -2.1128
PWK/PhJ both 12.0 1.1488 14.2587 9.7413
WSB/EiJ both 9.5625 1.0746 11.6753 7.4497




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CKB, or AXBBXA