Phenotype measure:   Chesler4   VC_bottom_velocity

ID, description, units MPD:47021   VC_bottom_velocity   mean velocity in bottom, 20 min test   [cm/s]
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure visual cliff
Ontology mappings


  STRAIN COMPARISON PLOT
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Chesler4 - mean velocity in bottom, 20 min test



Distribution plot of DO animal values


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means12.5   cm/s 11.3   cm/s
Median of the strain means10.4   cm/s 8.41   cm/s
SD of the strain means± 9.66 ± 6.45
Coefficient of variation (CV)0.773 0.569
Min–max range of strain means4.76   –   36.9   cm/s 4.58   –   23.5   cm/s
Mean sample size per strain8.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 69.3451 69.3451 0.3664 0.5453
strain 8 5193.963 649.2454 3.4306 0.0008
sex:strain 8 1083.0788 135.3849 0.7154 0.678
Residuals 381 72103.8237 189.2489


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 13.0 8.12   8 2.87 0.626 5.57, 26.9 0.05
129S1/SvImJ m 23.5 41.3   7 15.6 1.76 1.96, 117.0 1.88
A/J f 36.9 51.1   4 25.5 1.38 3.84, 112.0 2.53
A/J m 20.5 21.0   5 9.4 1.03 1.77, 47.7 1.42
C57BL/6J f 5.73 1.21   8 0.427 0.211 4.15, 7.88 -0.7
C57BL/6J m 7.16 1.32   7 0.498 0.184 6.21, 9.36 -0.65
CAST/EiJ f 10.2 2.28   8 0.804 0.222 7.55, 13.3 -0.24
CAST/EiJ m 8.41 2.74   8 0.969 0.326 5.06, 14.2 -0.45
J:DO f 14.0 13.7   142 1.15 0.973 6.4, 149.0 0.16
J:DO m 12.9 13.6   138 1.15 1.05 4.56, 125.0 0.24
NOD/ShiLtJ f 10.4 1.99   8 0.702 0.192 7.59, 12.6 -0.22
NOD/ShiLtJ m 7.92 2.39   8 0.845 0.302 6.04, 13.2 -0.53
NZO/HlLtJ f 4.76 0.764   8 0.27 0.16 3.43, 5.66 -0.8
NZO/HlLtJ m 4.58 1.24   8 0.438 0.27 2.67, 5.99 -1.05
PWK/PhJ f 7.12 1.12   8 0.397 0.158 5.81, 8.91 -0.56
PWK/PhJ m 8.37 1.51   8 0.535 0.181 6.03, 10.8 -0.46
WSB/EiJ f 10.4 2.4   8 0.847 0.23 8.16, 14.3 -0.22
WSB/EiJ m 8.75 2.43   8 0.86 0.278 5.68, 13.9 -0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 12.965 4.8638 22.5282 3.4018
129S1/SvImJ m 23.4986 5.1996 33.722 13.2751
A/J f 36.905 6.8784 50.4294 23.3806
A/J m 20.48 6.1522 32.5766 8.3834
C57BL/6J f 5.7337 4.8638 15.2969 0.0
C57BL/6J m 7.1571 5.1996 17.3806 0.0
CAST/EiJ f 10.2363 4.8638 19.7994 0.6731
CAST/EiJ m 8.4113 4.8638 17.9744 0.0
J:DO f 14.0407 1.1544 16.3106 11.7708
J:DO m 12.9238 1.1711 15.2264 10.6213
NOD/ShiLtJ f 10.3538 4.8638 19.9169 0.7906
NOD/ShiLtJ m 7.9163 4.8638 17.4794 0.0
NZO/HlLtJ f 4.7613 4.8638 14.3244 0.0
NZO/HlLtJ m 4.5787 4.8638 14.1419 0.0
PWK/PhJ f 7.115 4.8638 16.6782 0.0
PWK/PhJ m 8.3713 4.8638 17.9344 0.0
WSB/EiJ f 10.4325 4.8638 19.9957 0.8693
WSB/EiJ m 8.7513 4.8638 18.3144 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 18.2318 3.5599 25.2313 11.2323
A/J both 28.6925 4.6142 37.7649 19.6201
C57BL/6J both 6.4454 3.5599 13.445 0.0
CAST/EiJ both 9.3238 3.4392 16.0859 2.5616
J:DO both 13.4823 0.8222 15.0989 11.8656
NOD/ShiLtJ both 9.135 3.4392 15.8972 2.3728
NZO/HlLtJ both 4.67 3.4392 11.4322 0.0
PWK/PhJ both 7.7431 3.4392 14.5053 0.9809
WSB/EiJ both 9.5919 3.4392 16.3541 2.8297