Project measure / variable:   Chesler4   VC_bottom_distance

ID, description, units MPD:47018   VC_bottom_distance   total distance traveled in bottom, 20 min test   [cm]  
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure visual cliff
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means2936   cm 2618   cm
Median of the strain means3010   cm 3344   cm
SD of the strain means± 1820 ± 1451
Coefficient of variation (CV)0.620 0.554
Min–max range of strain means405   –   5024   cm 501   –   4020   cm
Mean sample size per strain8.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 6282976.0436 6282976.0436 2.2112 0.1378
strain 8 317148629.6364 39643578.7046 13.9521 < 0.0001
sex:strain 8 11532486.7105 1441560.8388 0.5073 0.8509
Residuals 381 1082578625.4479 2841413.7151


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 405.0 163.0   8 57.7 0.402 216.0, 670.0 -1.39
129S1/SvImJ m 501.0 426.0   7 161.0 0.851 132.0, 1283.0 -1.46
A/J f 488.0 261.0   4 130.0 0.535 180.0, 813.0 -1.35
A/J m 530.0 486.0   5 217.0 0.917 121.0, 1320.0 -1.44
C57BL/6J f 2821.0 453.0   8 160.0 0.16 1929.0, 3360.0 -0.06
C57BL/6J m 2940.0 983.0   7 372.0 0.334 1347.0, 4150.0 0.22
CAST/EiJ f 5024.0 1129.0   8 399.0 0.225 3614.0, 6696.0 1.15
CAST/EiJ m 4020.0 1944.0   8 687.0 0.484 1482.0, 7787.0 0.97
J:DO f 3546.0 1905.0   142 160.0 0.537 32.6, 7654.0 0.34
J:DO m 3344.0 1829.0   138 156.0 0.547 25.0, 7248.0 0.5
NOD/ShiLtJ f 5005.0 1195.0   8 422.0 0.239 2722.0, 6188.0 1.14
NOD/ShiLtJ m 3869.0 1214.0   8 429.0 0.314 1698.0, 5866.0 0.86
NZO/HlLtJ f 1475.0 536.0   8 190.0 0.364 885.0, 2544.0 -0.8
NZO/HlLtJ m 1205.0 377.0   8 133.0 0.313 630.0, 1713.0 -0.97
PWK/PhJ f 3010.0 1257.0   8 445.0 0.418 1345.0, 5094.0 0.04
PWK/PhJ m 3532.0 1218.0   8 431.0 0.345 1872.0, 5807.0 0.63
WSB/EiJ f 4646.0 1519.0   8 537.0 0.327 3142.0, 7664.0 0.94
WSB/EiJ m 3617.0 991.0   8 350.0 0.274 1917.0, 4928.0 0.69


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 405.3 595.967 1577.0963 0.0
129S1/SvImJ m 500.5343 637.1156 1753.2372 0.0
A/J f 487.8275 842.8247 2144.9977 0.0
A/J m 529.518 753.8453 2011.7361 0.0
C57BL/6J f 2821.0625 595.967 3992.8588 1649.2662
C57BL/6J m 2940.2586 637.1156 4192.9615 1687.5556
CAST/EiJ f 5023.9362 595.967 6195.7326 3852.1399
CAST/EiJ m 4019.5537 595.967 5191.3501 2847.7574
J:DO f 3546.2294 141.4566 3824.3627 3268.0962
J:DO m 3344.4928 143.492 3626.6282 3062.3574
NOD/ShiLtJ f 5004.7687 595.967 6176.5651 3832.9724
NOD/ShiLtJ m 3869.3412 595.967 5041.1376 2697.5449
NZO/HlLtJ f 1474.9475 595.967 2646.7438 303.1512
NZO/HlLtJ m 1204.8363 595.967 2376.6326 33.0399
PWK/PhJ f 3010.1413 595.967 4181.9376 1838.3449
PWK/PhJ m 3532.1175 595.967 4703.9138 2360.3212
WSB/EiJ f 4645.8 595.967 5817.5963 3474.0037
WSB/EiJ m 3616.5613 595.967 4788.3576 2444.7649


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 452.9171 436.2032 1310.5842 0.0
A/J both 508.6727 565.384 1620.3363 0.0
C57BL/6J both 2880.6605 436.2032 3738.3276 2022.9935
CAST/EiJ both 4521.745 421.4123 5350.3301 3693.1599
J:DO both 3445.3611 100.7471 3643.4511 3247.2712
NOD/ShiLtJ both 4437.055 421.4123 5265.6401 3608.4699
NZO/HlLtJ both 1339.8919 421.4123 2168.477 511.3068
PWK/PhJ both 3271.1294 421.4123 4099.7145 2442.5443
WSB/EiJ both 4131.1806 421.4123 4959.7657 3302.5955




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA