Project measure / variable:   Chesler4   VC_top_distance

ID, description, units MPD:47013   VC_top_distance   total distance traveled in top, 20 min test   [cm]  
Data set, strains Chesler4   DO population w/par   9 strains     sex: both     age: 12-16wks
Procedure visual cliff
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Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means3574   cm 3194   cm
Median of the strain means3481   cm 3558   cm
SD of the strain means± 1726 ± 1406
Coefficient of variation (CV)0.483 0.440
Min–max range of strain means1369   –   5997   cm 1274   –   5183   cm
Mean sample size per strain8.0   mice 7.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 10877307.7147 10877307.7147 5.1954 0.0232
strain 8 566375977.3195 70796997.1649 33.8152 < 0.0001
sex:strain 8 13323764.9521 1665470.619 0.7955 0.6069
Residuals 381 797678374.3198 2093644.0271


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1598.0 494.0   8 175.0 0.309 630.0, 2178.0 -1.14
129S1/SvImJ m 1274.0 301.0   7 114.0 0.236 948.0, 1660.0 -1.37
A/J f 1369.0 588.0   4 294.0 0.429 970.0, 2224.0 -1.28
A/J m 1429.0 450.0   5 201.0 0.315 837.0, 1964.0 -1.26
C57BL/6J f 3032.0 767.0   8 271.0 0.253 1803.0, 4552.0 -0.31
C57BL/6J m 3558.0 1188.0   7 449.0 0.334 2476.0, 5422.0 0.26
CAST/EiJ f 4214.0 969.0   8 342.0 0.23 2628.0, 5865.0 0.37
CAST/EiJ m 3997.0 1811.0   8 640.0 0.453 1577.0, 7156.0 0.57
J:DO f 5464.0 1656.0   142 139.0 0.303 2268.0, 11006.0 1.1
J:DO m 5183.0 1511.0   138 129.0 0.292 2065.0, 10344.0 1.41
NOD/ShiLtJ f 5997.0 1238.0   8 438.0 0.207 4457.0, 8004.0 1.4
NOD/ShiLtJ m 4400.0 1190.0   8 421.0 0.27 3172.0, 6672.0 0.86
NZO/HlLtJ f 1941.0 648.0   8 229.0 0.334 1242.0, 2808.0 -0.95
NZO/HlLtJ m 1656.0 307.0   8 109.0 0.185 1193.0, 2090.0 -1.09
PWK/PhJ f 3481.0 603.0   8 213.0 0.173 2526.0, 4208.0 -0.05
PWK/PhJ m 3420.0 766.0   8 271.0 0.224 2342.0, 4497.0 0.16
WSB/EiJ f 5070.0 1438.0   8 508.0 0.284 3232.0, 6959.0 0.87
WSB/EiJ m 3829.0 973.0   8 344.0 0.254 2652.0, 5505.0 0.45


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1598.005 511.5716 2603.8622 592.1478
129S1/SvImJ m 1274.1871 546.893 2349.4937 198.8806
A/J f 1368.88 723.4715 2791.3768 0.0
A/J m 1429.418 647.0926 2701.7378 157.0982
C57BL/6J f 3031.8625 511.5716 4037.7197 2026.0053
C57BL/6J m 3558.0914 546.893 4633.398 2482.7849
CAST/EiJ f 4214.0912 511.5716 5219.9484 3208.2341
CAST/EiJ m 3997.0725 511.5716 5002.9297 2991.2153
J:DO f 5463.8139 121.4248 5702.5604 5225.0673
J:DO m 5182.5796 123.172 5424.7615 4940.3976
NOD/ShiLtJ f 5996.515 511.5716 7002.3722 4990.6578
NOD/ShiLtJ m 4400.1062 511.5716 5405.9634 3394.2491
NZO/HlLtJ f 1940.5213 511.5716 2946.3784 934.6641
NZO/HlLtJ m 1655.6025 511.5716 2661.4597 649.7453
PWK/PhJ f 3481.3388 511.5716 4487.1959 2475.4816
PWK/PhJ m 3419.8688 511.5716 4425.7259 2414.0116
WSB/EiJ f 5069.9938 511.5716 6075.8509 4064.1366
WSB/EiJ m 3828.8225 511.5716 4834.6797 2822.9653


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1436.0961 374.4321 2172.3081 699.884
A/J both 1399.149 485.3194 2353.3889 444.9091
C57BL/6J both 3294.977 374.4321 4031.189 2558.7649
CAST/EiJ both 4105.5819 361.7357 4816.8303 3394.3335
J:DO both 5323.1967 86.4802 5493.235 5153.1585
NOD/ShiLtJ both 5198.3106 361.7357 5909.559 4487.0622
NZO/HlLtJ both 1798.0619 361.7357 2509.3103 1086.8135
PWK/PhJ both 3450.6038 361.7357 4161.8522 2739.3553
WSB/EiJ both 4449.4081 361.7357 5160.6565 3738.1597




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA