Phenotype measure:   Chesler4   OF_periphery_pct


Plot Options Bins number: (min: 10, max: 40)


Distribution of Individual Animals with Boxplots.





  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means42.8   % 41.3   %
Median of the strain means50.9   % 48.3   %
SD of the strain means± 13.6 ± 16.2
Coefficient of variation (CV)0.317 0.393
Min–max range of strain means14.7   –   57.0   % 11.7   –   58.0   %
Mean sample size per strain8.0   mice 8.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 494.4581 494.4581 4.1959 0.0412
strain 8 104408.4387 13051.0548 110.7484 < 0.0001
sex:strain 8 1821.4237 227.678 1.932 0.054
Residuals 393 46312.7753 117.8442


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 41.7 26.5   8 9.37 0.635 7.8, 86.0 -0.08
129S1/SvImJ m 48.4 22.9   8 8.1 0.473 20.4, 91.3 0.44
A/J f 51.0 27.0   8 9.53 0.528 0.6
A/J m 58.0 26.4   8 9.33 0.455 7.87, 92.1 1.03
C57BL/6J f 30.7 5.86   8 2.07 0.191 20.9, 39.6 -0.89
C57BL/6J m 23.6 5.48   8 1.94 0.232 14.6, 31.2 -1.09
CAST/EiJ f 51.4 5.21   8 1.84 0.102 43.6, 57.0 0.63
CAST/EiJ m 48.3 5.84   8 2.07 0.121 43.5, 60.1 0.43
J:DO f 14.7 9.28   144 0.773 0.632 -2.07
J:DO m 11.7 8.18   139 0.694 0.697 0.56, 61.1 -1.82
NOD/ShiLtJ f 35.9 6.57   8 2.32 0.183 26.3, 43.5 -0.51
NOD/ShiLtJ m 35.0 9.47   8 3.35 0.27 19.9, 44.6 -0.39
NZO/HlLtJ f 50.9 11.6   8 4.09 0.227 37.4, 70.9 0.6
NZO/HlLtJ m 34.0 11.5   8 4.06 0.338 13.8, 47.2 -0.45
PWK/PhJ f 57.0 6.93   8 2.45 0.122 47.2, 65.2 1.05
PWK/PhJ m 56.5 7.56   8 2.67 0.134 48.8, 68.4 0.94
WSB/EiJ f 51.8 14.7   8 5.2 0.284 30.0, 73.0 0.66
WSB/EiJ m 55.8 6.51   8 2.3 0.117 43.9, 65.4 0.9


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 41.7187 3.838 49.2644 34.1731
129S1/SvImJ m 48.42 3.838 55.9657 40.8743
A/J f 51.0162 3.838 58.5619 43.4706
A/J m 57.9625 3.838 65.5082 50.4168
C57BL/6J f 30.65 3.838 38.1957 23.1043
C57BL/6J m 23.63 3.838 31.1757 16.0843
CAST/EiJ f 51.3563 3.838 58.9019 43.8106
CAST/EiJ m 48.3075 3.838 55.8532 40.7618
J:DO f 14.6809 0.9046 16.4594 12.9024
J:DO m 11.7453 0.9208 13.5556 9.9351
NOD/ShiLtJ f 35.925 3.838 43.4707 28.3793
NOD/ShiLtJ m 35.0188 3.838 42.5644 27.4731
NZO/HlLtJ f 50.915 3.838 58.4607 43.3693
NZO/HlLtJ m 33.9813 3.838 41.5269 26.4356
PWK/PhJ f 56.9962 3.838 64.5419 49.4506
PWK/PhJ m 56.485 3.838 64.0307 48.9393
WSB/EiJ f 51.7713 3.838 59.3169 44.2256
WSB/EiJ m 55.8013 3.838 63.3469 48.2556


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 45.0694 2.7139 50.405 39.7338
A/J both 54.4894 2.7139 59.825 49.1538
C57BL/6J both 27.14 2.7139 32.4756 21.8044
CAST/EiJ both 49.8319 2.7139 55.1675 44.4963
J:DO both 13.2131 0.6454 14.482 11.9442
NOD/ShiLtJ both 35.4719 2.7139 40.8075 30.1363
NZO/HlLtJ both 42.4481 2.7139 47.7837 37.1125
PWK/PhJ both 56.7406 2.7139 62.0762 51.405
WSB/EiJ both 53.7863 2.7139 59.1218 48.4507




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CKB, or AXBBXA