Project measure / variable:   Boon1   survival_lo

ID, description, units MPD:46921   survival_lo   survival (days to death, max 30)   [d]  dose group: low  
influenza A (H5N1) virus study
Data set, strains Boon1   inbred   18 strains     sex: f     age: 6-9wks
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  STRAIN COMPARISON PLOT
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Boon1 - survival (days to death, max 30) dose group: low



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means27.1   d
Median of the strain means30.0   d
SD of the strain means± 4.30
Coefficient of variation (CV)0.159
Min–max range of strain means19.0   –   30.0   d
Mean sample size per strain9.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 17 3927.9509 231.0559 4.9449 < 0.0001
Residuals 159 7429.4841 46.7263


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 30.0 0.0   10 0.0 0.0 30.0, 30.0 0.67
129X1/SvJ f 30.0 0.0   5 0.0 0.0 30.0, 30.0 0.67
A/HeJ f 30.0 0.0   9 0.0 0.0 30.0, 30.0 0.67
A/J f 22.6 9.58   10 3.03 0.424 10.0, 30.0 -1.05
AKR/J f 30.0 0.0   5 0.0 0.0 30.0, 30.0 0.67
B10.D2-Hc0 f 30.0 0.0   8 0.0 0.0 30.0, 30.0 0.67
B10.D2-Hc1 f 30.0 0.0   2   0.0 0.0 30.0, 30.0 0.67
B6D2F1/J f 30.0 0.0   20 0.0 0.0 30.0, 30.0 0.67
BTBR T+ Itpr3tf/J f 20.0 10.6   10 3.34 0.528 9.0, 30.0 -1.65
C3H/HeJ f 30.0 0.0   5 0.0 0.0 30.0, 30.0 0.67
C57BL/6J f 30.0 0.0   15 0.0 0.0 30.0, 30.0 0.67
DBA/1J f 20.7 9.81   10 3.1 0.474 11.0, 30.0 -1.49
DBA/2J f 19.0 9.97   30 1.82 0.525 8.0, 30.0 -1.89
FVB/NJ f 30.0 0.0   5 0.0 0.0 30.0, 30.0 0.67
LP/J f 23.6 9.3   14 2.48 0.394 9.0, 30.0 -0.82
NOD/ShiLtJ f 30.0 0.0   5 0.0 0.0 30.0, 30.0 0.67
NZB/BlNJ f 22.2 9.52   9 3.17 0.429 9.0, 30.0 -1.14
NZW/LacJ f 30.0 0.0   5 0.0 0.0 30.0, 30.0 0.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 30.0 2.1616 34.2692 25.7308
129X1/SvJ f 30.0 3.057 36.0376 23.9624
A/HeJ f 30.0 2.2786 34.5001 25.4999
A/J f 22.6 2.1616 26.8692 18.3308
AKR/J f 30.0 3.057 36.0376 23.9624
B10.D2-Hc0 f 30.0 2.4168 34.7731 25.2269
B10.D2-Hc1 f 30.0 4.8335 39.5462 20.4538
B6D2F1/J f 30.0 1.5285 33.0188 26.9812
BTBR T+ Itpr3tf/J f 20.0 2.1616 24.2692 15.7308
C3H/HeJ f 30.0 3.057 36.0376 23.9624
C57BL/6J f 30.0 1.765 33.4858 26.5142
DBA/1J f 20.7 2.1616 24.9692 16.4308
DBA/2J f 19.0 1.248 21.4648 16.5352
FVB/NJ f 30.0 3.057 36.0376 23.9624
LP/J f 23.5714 1.8269 27.1796 19.9633
NOD/ShiLtJ f 30.0 3.057 36.0376 23.9624
NZB/BlNJ f 22.2222 2.2786 26.7224 17.7221
NZW/LacJ f 30.0 3.057 36.0376 23.9624




  GWAS USING LINEAR MIXED MODELS