Project measure / variable:   Boon1   bw_change_med

ID, description, units MPD:46912   bw_change_med   change in body weight, post-infection   [%]  dose group: medium  
influenza A (H5N1) virus study
Data set, strains Boon1   inbred   22 strains     sex: f     age: 6-9wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Boon1 - change in body weight, post-infection dose group: medium



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested22 strains
Mean of the strain means86.5   %
Median of the strain means82.3   %
SD of the strain means± 10.0
Coefficient of variation (CV)0.116
Min–max range of strain means75.5   –   107   %
Mean sample size per strain10.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 16532.5232 787.263 9.8025 < 0.0001
Residuals 309 24816.5947 80.3126


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 79.0 5.91   12 1.71 0.0748 70.2, 91.0 -0.75
129X1/SvJ f 75.5 3.45   5 1.54 0.0457 71.1, 80.7 -1.1
A/HeJ f 80.5 6.43   10 2.03 0.0798 70.7, 91.3 -0.6
A/J f 76.9 5.18   10 1.64 0.0674 70.5, 84.8 -0.96
AKR/J f 103.0 7.54   5 3.37 0.0732 94.1, 113.0 1.64
B10.D2-Hc0 f 77.4 7.76   15 2.0 0.1 71.2, 104.0 -0.91
B10.D2-Hc1 f 80.2 7.78   9 2.59 0.097 71.1, 92.0 -0.63
B6D2F1/J f 77.3 6.63   15 1.71 0.0857 70.8, 91.2 -0.92
BALB/cByJ f 96.4 8.39   10 2.65 0.087 78.0, 106.0 0.98
BALB/cJ f 107.0 7.6   5 3.4 0.0709 102.0, 120.0 2.04
BTBR T+ Itpr3tf/J f 87.5 18.7   8 6.62 0.214 70.1, 131.0 0.1
C3H/HeJ f 92.3 14.6   10 4.63 0.159 73.9, 111.0 0.57
C57BL/6J f 86.4 10.6   110 1.01 0.123 70.5, 109.0 -0.01
DBA/2J f 77.7 5.56   55 0.749 0.0715 70.3, 87.8 -0.88
FVB/NJ f 93.9 7.54   10 2.39 0.0804 78.1, 107.0 0.73
KK/HlJ f 91.1 16.8   4 8.4 0.184 73.2, 109.0 0.45
LP/J f 79.6 5.78   9 1.93 0.0727 72.2, 88.8 -0.69
MRL/MpJ f 84.2 8.55   5 3.82 0.102 74.2, 95.7 -0.23
NOD/ShiLtJ f 100.0 3.19   5 1.42 0.0319 96.6, 105.0 1.34
NZB/BlNJ f 78.0 5.22   6 2.13 0.067 71.8, 84.8 -0.85
NZW/LacJ f 78.1 5.05   10 1.6 0.0646 70.4, 88.4 -0.84
SM/J f 102.0 3.24   3 1.87 0.0316 100.0, 106.0 1.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 79.0417 2.587 84.1321 73.9512
129X1/SvJ f 75.48 4.0078 83.366 67.594
A/HeJ f 80.55 2.8339 86.1263 74.9737
A/J f 76.88 2.8339 82.4563 71.3037
AKR/J f 102.98 4.0078 110.866 95.094
B10.D2-Hc0 f 77.4133 2.3139 81.9663 72.8603
B10.D2-Hc1 f 80.2222 2.9872 86.1001 74.3443
B6D2F1/J f 77.3267 2.3139 81.8797 72.7737
BALB/cByJ f 96.41 2.8339 101.9863 90.8337
BALB/cJ f 107.1 4.0078 114.986 99.214
BTBR T+ Itpr3tf/J f 87.55 3.1685 93.7845 81.3155
C3H/HeJ f 92.33 2.8339 97.9063 86.7537
C57BL/6J f 86.4255 0.8545 88.1068 84.7441
DBA/2J f 77.7345 1.2084 80.1123 75.3568
FVB/NJ f 93.87 2.8339 99.4463 88.2937
KK/HlJ f 91.1 4.4809 99.9169 82.2831
LP/J f 79.5889 2.9872 85.4668 73.711
MRL/MpJ f 84.18 4.0078 92.066 76.294
NOD/ShiLtJ f 100.02 4.0078 107.906 92.134
NZB/BlNJ f 78.0167 3.6586 85.2156 70.8177
NZW/LacJ f 78.11 2.8339 83.6863 72.5337
SM/J f 102.3 5.1741 112.4808 92.1192




  GWAS USING LINEAR MIXED MODELS