Project measure / variable:   HMDPpheno4   precue_vel

ID, description, units MPD:46861   precue_vel   cued fear, velocity, day 3   [cm/s]  pre-cue  
Data set, strains HMDPpheno4   HMDP w/par   94 strains     sex: m     age: 10wks
Procedure fear conditioning test
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HMDPpheno4 - cued fear, velocity, day 3 pre-cue



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested94 strains
Mean of the strain means4.12   cm/s
Median of the strain means4.08   cm/s
SD of the strain means± 0.920
Coefficient of variation (CV)0.223
Min–max range of strain means2.51   –   6.49   cm/s
Mean sample size per strain7.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 93 582.4078 6.2624 2.9968 < 0.0001
Residuals 593 1239.2106 2.0897


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 4.22 0.43   4 0.215 0.102 3.88, 4.8 0.11
A/J m 3.86 1.16   5 0.517 0.3 2.28, 4.99 -0.28
AKR/J m 5.72 0.614   8 0.217 0.107 4.96, 6.8 1.74
AXB10/PgnJ m 3.03 0.617   3 0.356 0.204 2.34, 3.53 -1.18
AXB12/PgnJ m 4.81 1.82   8 0.643 0.378 2.77, 7.53 0.75
AXB13/PgnJ m 4.6 0.324   8 0.114 0.0704 4.05, 5.17 0.53
AXB15/PgnJ m 2.59 0.798   7 0.301 0.307 1.19, 3.27 -1.66
AXB19a/PgnJ m 3.67 1.22   4 0.611 0.333 2.23, 5.22 -0.49
AXB19/PgnJ m 2.69 1.19   15 0.307 0.442 0.06, 4.41 -1.55
AXB1/PgnJ m 3.04 0.888   8 0.314 0.292 2.0, 4.5 -1.17
AXB23/PgnJ m 3.73 0.32   4 0.16 0.0858 3.48, 4.19 -0.42
AXB24/PgnJ m 3.1 1.37   6 0.56 0.442 1.95, 5.55 -1.1
AXB2/PgnJ m 4.83 0.764   8 0.27 0.158 3.38, 5.68 0.78
AXB4/PgnJ m 2.63 0.696   4 0.348 0.265 1.74, 3.33 -1.62
AXB5/PgnJ m 3.29 1.74   8 0.615 0.528 1.34, 5.96 -0.9
AXB6/PgnJ m 5.01 2.4   9 0.8 0.479 2.18, 9.47 0.97
AXB8/PgnJ m 3.14 0.725   7 0.274 0.231 2.36, 4.58 -1.06
B6cC3-1/KccJ m 4.72 1.97   7 0.743 0.417 1.37, 7.11 0.66
BALB/cJ m 4.47 2.33   12 0.673 0.522 1.53, 8.21 0.38
BTBR T+ Itpr3tf/J m 5.69 2.54   8 0.897 0.446 3.04, 9.94 1.71
BUB/BnJ m 4.07 1.54   3 0.889 0.378 2.53, 5.61 -0.05
BXA12/PgnJ m 5.23 2.3   7 0.871 0.441 1.69, 6.92 1.21
BXA13/PgnJ m 5.39 1.89   10 0.598 0.351 3.66, 9.52 1.38
BXA14/PgnJ m 4.46 0.986   10 0.312 0.221 2.95, 6.2 0.37
BXA16/PgnJ m 4.87 0.46   7 0.174 0.0946 4.3, 5.4 0.82
BXA1/PgnJ m 5.54 1.68   3 0.97 0.303 4.21, 7.43 1.55
BXA24/PgnJ m 4.1 2.73   6 1.12 0.666 1.87, 8.02 -0.02
BXA25/PgnJ m 3.4 1.58   8 0.557 0.464 1.23, 5.44 -0.78
BXA26/PgnJ m 5.25 0.922   8 0.326 0.176 3.89, 6.68 1.23
BXA2/PgnJ m 3.4 1.08   8 0.382 0.318 2.21, 4.64 -0.78
BXA4/PgnJ m 3.54 1.15   8 0.405 0.324 2.02, 5.29 -0.63
BXA7/PgnJ m 4.52 2.26   8 0.8 0.501 1.27, 6.76 0.44
BXA8/PgnJ m 4.41 0.934   8 0.33 0.212 3.08, 5.89 0.32
BXD11/TyJ m 3.38 1.34   5 0.598 0.396 2.04, 5.61 -0.8
BXD12/TyJ m 4.74 1.84   8 0.649 0.387 2.02, 7.57 0.68
BXD13/TyJ m 4.41 2.91   4 1.46 0.66 1.35, 7.43 0.32
BXD14/TyJ m 3.51 1.57   8 0.555 0.447 2.26, 6.5 -0.66
BXD15/TyJ m 2.98 1.68   6 0.685 0.563 1.67, 6.06 -1.24
BXD16/TyJ m 4.36 1.1   6 0.448 0.252 2.18, 5.15 0.26
BXD18/TyJ m 4.14 1.03   7 0.389 0.249 2.83, 5.59 0.03
BXD19/TyJ m 3.52 1.34   7 0.508 0.381 1.31, 5.56 -0.65
BXD1/TyJ m 3.99 0.937   7 0.354 0.235 2.78, 5.57 -0.14
BXD20/TyJ m 4.21 1.17   8 0.413 0.278 2.95, 6.09 0.1
BXD21/TyJ m 2.78 0.684   6 0.279 0.246 1.72, 3.53 -1.45
BXD24/TyJ m 2.77 1.1   4 0.552 0.398 1.31, 3.99 -1.46
BXD27/TyJ m 3.55 1.04   8 0.369 0.294 2.16, 5.06 -0.62
BXD28/TyJ m 2.81 1.08   4 0.542 0.386 1.74, 4.32 -1.42
BXD29-Tlr4lps-2J/J m 4.22 1.4   7 0.53 0.332 1.83, 5.9 0.11
BXD2/TyJ m 3.53 0.648   4 0.324 0.184 2.99, 4.46 -0.64
BXD31/TyJ m 4.33 0.776   4 0.388 0.179 3.52, 5.06 0.23
BXD32/TyJ m 4.93 1.09   5 0.486 0.221 3.63, 6.19 0.88
BXD33/TyJ m 3.71 0.723   3 0.418 0.195 2.95, 4.39 -0.44
BXD34/TyJ m 4.11 1.35   8 0.476 0.327 2.13, 6.19 -0.01
BXD36/TyJ m 4.37 2.92   8 1.03 0.669 1.49, 10.4 0.28
BXD38/TyJ m 3.42 0.795   8 0.281 0.232 2.49, 4.93 -0.76
BXD39/TyJ m 3.78 2.21   9 0.737 0.584 1.14, 7.67 -0.37
BXD40/TyJ m 3.94 1.42   8 0.502 0.36 2.6, 6.31 -0.19
BXD42/TyJ m 6.35 3.04   9 1.01 0.479 3.48, 13.6 2.43
BXD5/TyJ m 4.5 2.42   7 0.916 0.539 1.72, 7.26 0.42
BXD6/TyJ m 3.7 1.36   7 0.514 0.368 1.44, 5.3 -0.45
BXD8/TyJ m 3.13 1.32   8 0.466 0.421 1.89, 6.15 -1.07
BXD9/TyJ m 3.27 1.53   8 0.54 0.468 1.71, 6.01 -0.92
BXH10/TyJ m 3.97 1.33   10 0.421 0.335 2.05, 5.45 -0.16
BXH14/TyJ m 2.51 0.739   9 0.246 0.294 1.27, 3.81 -1.75
BXH19/TyJ m 3.32 1.14   14 0.304 0.343 1.46, 5.3 -0.87
BXH20/KccJ m 4.98 0.909   6 0.371 0.183 3.3, 5.72 0.94
BXH22/KccJ m 5.31 0.91   9 0.303 0.171 3.53, 6.51 1.3
BXH2/TyJ m 2.73 1.01   15 0.262 0.371 1.09, 5.84 -1.51
BXH4/TyJ m 5.17 0.788   7 0.298 0.152 4.07, 6.24 1.15
BXH6/TyJ m 4.29 1.83   8 0.646 0.426 2.21, 7.36 0.19
BXH7/TyJ m 5.08 0.215   3 0.124 0.0423 4.83, 5.22 1.05
BXH8/TyJ m 3.25 1.14   6 0.467 0.352 1.68, 5.0 -0.94
BXH9/TyJ m 5.42 1.02   5 0.458 0.189 4.18, 6.36 1.42
C3H/HeJ m 3.63 0.501   8 0.177 0.138 2.63, 4.26 -0.53
C57BL/6J m 3.93 0.734   12 0.212 0.187 2.89, 5.08 -0.2
C57L/J m 5.46 1.75   8 0.619 0.321 2.29, 7.69 1.46
C58/J m 3.52 1.41   8 0.497 0.399 1.62, 6.43 -0.65
CAST/EiJ m 3.61 0.837   3 0.483 0.232 2.65, 4.16 -0.55
CBA/J m 3.56 1.17   11 0.353 0.329 1.7, 5.23 -0.6
CE/J m 3.56 1.85   4 0.925 0.519 1.89, 6.2 -0.6
DBA/2J m 3.51 1.19   12 0.343 0.339 1.85, 6.2 -0.66
FVB/NJ m 4.69 0.902   12 0.26 0.192 3.4, 6.1 0.62
KK/HlJ m 4.21 1.23   7 0.464 0.291 2.18, 5.67 0.1
LG/J m 5.69 0.533   3 0.308 0.0936 5.09, 6.1 1.71
LP/J m 3.15 1.36   11 0.41 0.431 1.12, 5.08 -1.05
MA/MyJ m 4.93 1.34   4 0.668 0.271 3.06, 5.91 0.88
NOD/ShiLtJ m 6.49 2.03   8 0.718 0.313 3.7, 8.6 2.58
NON/ShiLtJ m 6.05 1.18   7 0.448 0.196 4.48, 7.47 2.1
NZB/BlNJ m 3.12 1.51   7 0.569 0.483 1.17, 5.15 -1.08
NZW/LacJ m 4.11 0.985   4 0.493 0.24 2.78, 5.01 -0.01
PL/J m 5.34 0.556   4 0.278 0.104 4.68, 6.04 1.33
SEA/GnJ m 4.29 0.77   7 0.291 0.18 3.23, 5.32 0.19
SM/J m 3.55 1.16   16 0.289 0.326 1.29, 5.63 -0.62
SWR/J m 5.04 0.828   11 0.25 0.164 3.46, 6.01 1.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 4.2225 0.7228 5.642 2.803
A/J m 3.856 0.6465 5.1257 2.5863
AKR/J m 5.7238 0.5111 6.7275 4.72
AXB10/PgnJ m 3.03 0.8346 4.6692 1.3908
AXB12/PgnJ m 4.815 0.5111 5.8188 3.8112
AXB13/PgnJ m 4.5975 0.5111 5.6013 3.5937
AXB15/PgnJ m 2.5943 0.5464 3.6674 1.5212
AXB19a/PgnJ m 3.67 0.7228 5.0895 2.2505
AXB19/PgnJ m 2.6893 0.3732 3.4224 1.9563
AXB1/PgnJ m 3.0387 0.5111 4.0425 2.035
AXB23/PgnJ m 3.725 0.7228 5.1445 2.3055
AXB24/PgnJ m 3.1 0.5902 4.2591 1.9409
AXB2/PgnJ m 4.8338 0.5111 5.8375 3.83
AXB4/PgnJ m 2.6275 0.7228 4.047 1.208
AXB5/PgnJ m 3.295 0.5111 4.2988 2.2912
AXB6/PgnJ m 5.01 0.4819 5.9564 4.0636
AXB8/PgnJ m 3.14 0.5464 4.2131 2.0669
B6cC3-1/KccJ m 4.72 0.5464 5.7931 3.6469
BALB/cJ m 4.4658 0.4173 5.2854 3.6463
BTBR T+ Itpr3tf/J m 5.685 0.5111 6.6888 4.6812
BUB/BnJ m 4.07 0.8346 5.7092 2.4308
BXA12/PgnJ m 5.2286 0.5464 6.3017 4.1555
BXA13/PgnJ m 5.391 0.4571 6.2888 4.4932
BXA14/PgnJ m 4.457 0.4571 5.3548 3.5592
BXA16/PgnJ m 4.8657 0.5464 5.9388 3.7926
BXA1/PgnJ m 5.5433 0.8346 7.1825 3.9042
BXA24/PgnJ m 4.105 0.5902 5.2641 2.9459
BXA25/PgnJ m 3.3987 0.5111 4.4025 2.395
BXA26/PgnJ m 5.2475 0.5111 6.2513 4.2437
BXA2/PgnJ m 3.4025 0.5111 4.4063 2.3987
BXA4/PgnJ m 3.5363 0.5111 4.54 2.5325
BXA7/PgnJ m 4.5162 0.5111 5.52 3.5125
BXA8/PgnJ m 4.4088 0.5111 5.4125 3.405
BXD11/TyJ m 3.376 0.6465 4.6457 2.1063
BXD12/TyJ m 4.74 0.5111 5.7438 3.7362
BXD13/TyJ m 4.4125 0.7228 5.832 2.993
BXD14/TyJ m 3.5075 0.5111 4.5113 2.5037
BXD15/TyJ m 2.9833 0.5902 4.1424 1.8243
BXD16/TyJ m 4.3633 0.5902 5.5224 3.2043
BXD18/TyJ m 4.1429 0.5464 5.2159 3.0698
BXD19/TyJ m 3.5229 0.5464 4.5959 2.4498
BXD1/TyJ m 3.9886 0.5464 5.0617 2.9155
BXD20/TyJ m 4.2062 0.5111 5.21 3.2025
BXD21/TyJ m 2.7767 0.5902 3.9357 1.6176
BXD24/TyJ m 2.775 0.7228 4.1945 1.3555
BXD27/TyJ m 3.5475 0.5111 4.5513 2.5437
BXD28/TyJ m 2.8075 0.7228 4.227 1.388
BXD29-Tlr4lps-2J/J m 4.2229 0.5464 5.2959 3.1498
BXD2/TyJ m 3.525 0.7228 4.9445 2.1055
BXD31/TyJ m 4.3275 0.7228 5.747 2.908
BXD32/TyJ m 4.928 0.6465 6.1977 3.6583
BXD33/TyJ m 3.71 0.8346 5.3492 2.0708
BXD34/TyJ m 4.11 0.5111 5.1138 3.1062
BXD36/TyJ m 4.37 0.5111 5.3738 3.3662
BXD38/TyJ m 3.4212 0.5111 4.425 2.4175
BXD39/TyJ m 3.7844 0.4819 4.7308 2.8381
BXD40/TyJ m 3.9413 0.5111 4.945 2.9375
BXD42/TyJ m 6.3511 0.4819 7.2975 5.4047
BXD5/TyJ m 4.4957 0.5464 5.5688 3.4226
BXD6/TyJ m 3.6957 0.5464 4.7688 2.6226
BXD8/TyJ m 3.1275 0.5111 4.1313 2.1237
BXD9/TyJ m 3.2663 0.5111 4.27 2.2625
BXH10/TyJ m 3.971 0.4571 4.8688 3.0732
BXH14/TyJ m 2.5089 0.4819 3.4553 1.5625
BXH19/TyJ m 3.3157 0.3864 4.0745 2.5569
BXH20/KccJ m 4.9783 0.5902 6.1374 3.8193
BXH22/KccJ m 5.3056 0.4819 6.2519 4.3592
BXH2/TyJ m 2.7327 0.3732 3.4657 1.9996
BXH4/TyJ m 5.1743 0.5464 6.2474 4.1012
BXH6/TyJ m 4.29 0.5111 5.2938 3.2862
BXH7/TyJ m 5.0767 0.8346 6.7158 3.4375
BXH8/TyJ m 3.2517 0.5902 4.4107 2.0926
BXH9/TyJ m 5.418 0.6465 6.6877 4.1483
C3H/HeJ m 3.635 0.5111 4.6388 2.6312
C57BL/6J m 3.9325 0.4173 4.7521 3.1129
C57L/J m 5.4563 0.5111 6.46 4.4525
C58/J m 3.525 0.5111 4.5288 2.5212
CAST/EiJ m 3.6133 0.8346 5.2525 1.9742
CBA/J m 3.56 0.4359 4.416 2.704
CE/J m 3.5625 0.7228 4.982 2.143
DBA/2J m 3.5108 0.4173 4.3304 2.6913
FVB/NJ m 4.6917 0.4173 5.5112 3.8721
KK/HlJ m 4.21 0.5464 5.2831 3.1369
LG/J m 5.6933 0.8346 7.3325 4.0542
LP/J m 3.1545 0.4359 4.0106 2.2985
MA/MyJ m 4.9325 0.7228 6.352 3.513
NOD/ShiLtJ m 6.4888 0.5111 7.4925 5.485
NON/ShiLtJ m 6.0486 0.5464 7.1217 4.9755
NZB/BlNJ m 3.1171 0.5464 4.1902 2.0441
NZW/LacJ m 4.1075 0.7228 5.527 2.688
PL/J m 5.345 0.7228 6.7645 3.9255
SEA/GnJ m 4.2857 0.5464 5.3588 3.2126
SM/J m 3.5531 0.3614 4.2629 2.8434
SWR/J m 5.0445 0.4359 5.9006 4.1885




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