Phenotype measure:   HMDPpheno4   ftr_post_act_burst

ID, description, units MPD:46831   ftr_post_act_burst   fear training activity burst to footshock, shock reactivity, day 1   [cm/s]
Data set, strains HMDPpheno4   HMDP w/par   94 strains     sex: m     age: 10wks
Procedure fear conditioning test
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno4 - fear training activity burst to footshock, shock reactivity, day 1



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested94 strains
Mean of the strain means37.4   cm/s
Median of the strain means37.1   cm/s
SD of the strain means± 10.1
Coefficient of variation (CV)0.269
Min–max range of strain means13.8   –   67.2   cm/s
Mean sample size per strain7.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 93 61906.1307 665.6573 2.6574 < 0.0001
Residuals 593 148544.0888 250.4959


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 27.0 15.8   4 7.89 0.585 16.6, 50.4 -1.04
A/J m 50.0 25.6   5 11.4 0.512 19.8, 82.0 1.25
AKR/J m 60.7 21.7   8 7.68 0.358 15.4, 88.3 2.31
AXB10/PgnJ m 36.8 8.36   3 4.83 0.228 28.2, 44.9 -0.06
AXB12/PgnJ m 21.3 10.3   8 3.66 0.486 11.8, 40.2 -1.6
AXB13/PgnJ m 13.8 4.75   8 1.68 0.344 10.3, 24.4 -2.35
AXB15/PgnJ m 44.4 18.6   7 7.03 0.419 10.2, 63.8 0.69
AXB19a/PgnJ m 15.7 3.3   4 1.65 0.21 13.1, 20.1 -2.16
AXB19/PgnJ m 35.5 21.5   15 5.54 0.605 3.92, 76.4 -0.19
AXB1/PgnJ m 45.0 14.3   8 5.06 0.318 21.8, 64.0 0.75
AXB23/PgnJ m 30.8 11.0   4 5.49 0.356 17.3, 43.1 -0.66
AXB24/PgnJ m 33.4 12.3   6 5.03 0.368 13.8, 45.1 -0.4
AXB2/PgnJ m 37.7 8.73   8 3.08 0.231 28.1, 50.8 0.03
AXB4/PgnJ m 26.8 14.7   4 7.36 0.548 6.02, 40.4 -1.06
AXB5/PgnJ m 30.2 9.88   8 3.49 0.327 20.6, 45.5 -0.72
AXB6/PgnJ m 31.2 16.8   9 5.6 0.537 9.82, 56.6 -0.62
AXB8/PgnJ m 38.2 11.0   7 4.17 0.288 20.8, 50.8 0.08
B6cC3-1/KccJ m 43.7 16.1   7 6.09 0.368 21.6, 66.5 0.62
BALB/cJ m 58.4 16.1   12 4.65 0.276 34.1, 92.0 2.08
BTBR T+ Itpr3tf/J m 43.2 22.9   8 8.11 0.531 20.4, 72.4 0.57
BUB/BnJ m 40.6 9.4   3 5.43 0.231 30.1, 48.1 0.31
BXA12/PgnJ m 37.5 6.86   7 2.59 0.183 28.0, 48.3 0.01
BXA13/PgnJ m 33.0 17.8   10 5.62 0.54 7.15, 60.0 -0.44
BXA14/PgnJ m 29.5 8.25   10 2.61 0.279 16.6, 44.4 -0.79
BXA16/PgnJ m 37.2 10.1   7 3.8 0.27 28.1, 58.0 -0.02
BXA1/PgnJ m 48.8 4.33   3 2.5 0.0888 43.8, 51.3 1.13
BXA24/PgnJ m 36.3 5.82   6 2.38 0.16 32.9, 47.8 -0.11
BXA25/PgnJ m 44.9 31.0   8 11.0 0.69 21.9, 117.0 0.74
BXA26/PgnJ m 34.5 11.4   8 4.03 0.33 21.9, 47.7 -0.29
BXA2/PgnJ m 42.6 13.7   8 4.84 0.321 22.8, 64.6 0.51
BXA4/PgnJ m 31.9 14.0   8 4.94 0.438 13.6, 60.0 -0.55
BXA7/PgnJ m 39.0 18.6   8 6.59 0.478 19.2, 66.8 0.15
BXA8/PgnJ m 36.8 18.2   8 6.45 0.496 17.4, 76.4 -0.06
BXD11/TyJ m 34.9 13.2   5 5.89 0.377 20.7, 50.9 -0.25
BXD12/TyJ m 32.1 14.9   8 5.27 0.464 11.8, 50.1 -0.53
BXD13/TyJ m 43.0 8.18   4 4.09 0.19 35.8, 52.3 0.55
BXD14/TyJ m 35.5 18.1   8 6.42 0.511 17.4, 61.1 -0.19
BXD15/TyJ m 39.3 25.9   6 10.6 0.659 8.05, 72.9 0.18
BXD16/TyJ m 16.4 8.34   6 3.41 0.51 2.84, 26.8 -2.09
BXD18/TyJ m 35.1 14.3   7 5.41 0.408 11.0, 50.4 -0.23
BXD19/TyJ m 41.3 9.22   7 3.49 0.223 31.0, 48.9 0.38
BXD1/TyJ m 36.4 7.71   7 2.91 0.212 25.3, 44.0 -0.1
BXD20/TyJ m 40.1 15.0   8 5.29 0.373 11.8, 57.6 0.26
BXD21/TyJ m 23.8 9.54   6 3.89 0.4 7.27, 32.8 -1.35
BXD24/TyJ m 35.9 15.6   4 7.82 0.435 16.2, 50.3 -0.15
BXD27/TyJ m 39.5 10.3   8 3.65 0.262 25.4, 51.4 0.2
BXD28/TyJ m 31.6 6.29   4 3.14 0.199 26.8, 40.4 -0.58
BXD29-Tlr4lps-2J/J m 35.5 14.2   7 5.39 0.401 14.0, 52.4 -0.19
BXD2/TyJ m 32.7 8.28   4 4.14 0.253 22.0, 40.1 -0.47
BXD31/TyJ m 34.9 9.56   4 4.78 0.274 21.6, 43.2 -0.25
BXD32/TyJ m 44.6 4.43   5 1.98 0.0994 40.2, 50.9 0.71
BXD33/TyJ m 32.0 14.0   3 8.09 0.438 15.8, 40.8 -0.54
BXD34/TyJ m 51.3 9.4   8 3.32 0.183 33.0, 62.2 1.38
BXD36/TyJ m 27.5 10.0   8 3.54 0.364 18.7, 44.5 -0.99
BXD38/TyJ m 42.4 11.8   8 4.16 0.277 26.8, 60.2 0.49
BXD39/TyJ m 38.1 5.92   9 1.97 0.156 31.0, 45.7 0.07
BXD40/TyJ m 40.6 20.0   8 7.05 0.491 7.35, 58.8 0.31
BXD42/TyJ m 42.3 12.2   9 4.08 0.289 26.2, 66.6 0.48
BXD5/TyJ m 23.0 12.1   7 4.59 0.527 5.29, 34.7 -1.43
BXD6/TyJ m 35.4 13.3   7 5.03 0.376 15.5, 58.2 -0.2
BXD8/TyJ m 46.2 18.2   8 6.42 0.393 7.61, 62.8 0.87
BXD9/TyJ m 31.4 16.1   8 5.68 0.511 8.03, 63.0 -0.6
BXH10/TyJ m 25.4 15.6   10 4.92 0.612 7.75, 45.2 -1.2
BXH14/TyJ m 33.0 18.9   9 6.31 0.574 12.7, 75.2 -0.44
BXH19/TyJ m 41.6 15.9   14 4.24 0.381 23.2, 78.7 0.41
BXH20/KccJ m 50.1 16.7   6 6.83 0.334 31.6, 77.2 1.26
BXH22/KccJ m 30.5 11.3   9 3.76 0.37 14.9, 43.4 -0.69
BXH2/TyJ m 46.1 17.3   15 4.47 0.375 21.0, 78.2 0.86
BXH4/TyJ m 26.3 11.8   7 4.47 0.449 13.3, 48.0 -1.11
BXH6/TyJ m 50.5 15.8   8 5.6 0.313 28.6, 68.2 1.3
BXH7/TyJ m 22.3 5.48   3 3.17 0.246 16.7, 27.7 -1.5
BXH8/TyJ m 47.0 17.9   6 7.31 0.381 17.0, 72.0 0.95
BXH9/TyJ m 38.2 27.9   5 12.5 0.73 11.8, 76.7 0.08
C3H/HeJ m 40.0 15.9   8 5.61 0.396 22.8, 63.1 0.25
C57BL/6J m 28.8 16.8   12 4.85 0.582 10.5, 63.5 -0.86
C57L/J m 41.8 10.9   8 3.84 0.26 27.9, 62.8 0.43
C58/J m 52.2 22.1   8 7.82 0.424 7.37, 75.3 1.47
CAST/EiJ m 59.7 17.7   3 10.2 0.296 42.2, 77.5 2.21
CBA/J m 37.0 24.0   11 7.23 0.648 13.6, 88.3 -0.04
CE/J m 56.3 15.5   4 7.73 0.274 36.7, 73.0 1.87
DBA/2J m 39.7 19.7   12 5.68 0.496 11.8, 88.6 0.22
FVB/NJ m 45.5 21.7   12 6.26 0.476 19.8, 82.0 0.8
KK/HlJ m 24.0 7.76   7 2.93 0.324 14.7, 37.2 -1.33
LG/J m 67.2 16.2   3 9.35 0.241 50.5, 82.8 2.95
LP/J m 39.6 15.4   11 4.65 0.389 20.1, 63.5 0.21
MA/MyJ m 31.8 5.31   4 2.65 0.167 27.3, 39.5 -0.56
NOD/ShiLtJ m 44.0 29.4   8 10.4 0.669 13.5, 77.5 0.65
NON/ShiLtJ m 43.1 5.26   7 1.99 0.122 33.3, 50.5 0.56
NZB/BlNJ m 20.5 4.02   7 1.52 0.196 15.4, 27.5 -1.68
NZW/LacJ m 26.3 8.08   4 4.04 0.307 16.7, 35.7 -1.11
PL/J m 25.8 8.94   4 4.47 0.346 19.0, 39.0 -1.16
SEA/GnJ m 27.4 11.2   7 4.23 0.409 15.6, 40.3 -1.0
SM/J m 42.1 17.5   16 4.37 0.415 12.2, 78.7 0.46
SWR/J m 56.7 21.5   11 6.48 0.379 20.2, 82.2 1.91


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129X1/SvJ m 26.9725 7.9135 42.5145 11.4305
A/J m 50.048 7.0781 63.9492 36.1468
AKR/J m 60.6725 5.5957 71.6623 49.6827
AXB10/PgnJ m 36.7533 9.1378 54.6996 18.807
AXB12/PgnJ m 21.2925 5.5957 32.2823 10.3027
AXB13/PgnJ m 13.82 5.5957 24.8098 2.8302
AXB15/PgnJ m 44.3971 5.9821 56.1458 32.6485
AXB19a/PgnJ m 15.6725 7.9135 31.2145 0.1305
AXB19/PgnJ m 35.4807 4.0865 43.5065 27.4548
AXB1/PgnJ m 44.9675 5.5957 55.9573 33.9777
AXB23/PgnJ m 30.8325 7.9135 46.3745 15.2905
AXB24/PgnJ m 33.4383 6.4614 46.1283 20.7484
AXB2/PgnJ m 37.7 5.5957 48.6898 26.7102
AXB4/PgnJ m 26.83 7.9135 42.372 11.288
AXB5/PgnJ m 30.1963 5.5957 41.1861 19.2064
AXB6/PgnJ m 31.2444 5.2757 41.6058 20.8831
AXB8/PgnJ m 38.23 5.9821 49.9786 26.4814
B6cC3-1/KccJ m 43.7329 5.9821 55.4815 31.9842
BALB/cJ m 58.4358 4.5689 67.409 49.4627
BTBR T+ Itpr3tf/J m 43.2237 5.5957 54.2136 32.2339
BUB/BnJ m 40.6167 9.1378 58.563 22.6704
BXA12/PgnJ m 37.4714 5.9821 49.22 25.7228
BXA13/PgnJ m 32.951 5.005 42.7806 23.1214
BXA14/PgnJ m 29.546 5.005 39.3756 19.7164
BXA16/PgnJ m 37.1871 5.9821 48.9358 25.4385
BXA1/PgnJ m 48.76 9.1378 66.7063 30.8137
BXA24/PgnJ m 36.315 6.4614 49.005 23.625
BXA25/PgnJ m 44.9337 5.5957 55.9236 33.9439
BXA26/PgnJ m 34.5088 5.5957 45.4986 23.5189
BXA2/PgnJ m 42.5987 5.5957 53.5886 31.6089
BXA4/PgnJ m 31.92 5.5957 42.9098 20.9302
BXA7/PgnJ m 38.9975 5.5957 49.9873 28.0077
BXA8/PgnJ m 36.8075 5.5957 47.7973 25.8177
BXD11/TyJ m 34.908 7.0781 48.8092 21.0068
BXD12/TyJ m 32.1175 5.5957 43.1073 21.1277
BXD13/TyJ m 42.9875 7.9135 58.5295 27.4455
BXD14/TyJ m 35.5013 5.5957 46.4911 24.5114
BXD15/TyJ m 39.3383 6.4614 52.0283 26.6484
BXD16/TyJ m 16.3567 6.4614 29.0466 3.6667
BXD18/TyJ m 35.08 5.9821 46.8286 23.3314
BXD19/TyJ m 41.31 5.9821 53.0586 29.5614
BXD1/TyJ m 36.4486 5.9821 48.1972 24.7
BXD20/TyJ m 40.1037 5.5957 51.0936 29.1139
BXD21/TyJ m 23.8433 6.4614 36.5333 11.1534
BXD24/TyJ m 35.9225 7.9135 51.4645 20.3805
BXD27/TyJ m 39.4775 5.5957 50.4673 28.4877
BXD28/TyJ m 31.5725 7.9135 47.1145 16.0305
BXD29-Tlr4lps-2J/J m 35.5429 5.9821 47.2915 23.7942
BXD2/TyJ m 32.73 7.9135 48.272 17.188
BXD31/TyJ m 34.8525 7.9135 50.3945 19.3105
BXD32/TyJ m 44.572 7.0781 58.4732 30.6708
BXD33/TyJ m 31.9767 9.1378 49.923 14.0304
BXD34/TyJ m 51.2825 5.5957 62.2723 40.2927
BXD36/TyJ m 27.515 5.5957 38.5048 16.5252
BXD38/TyJ m 42.4275 5.5957 53.4173 31.4377
BXD39/TyJ m 38.0733 5.2757 48.4346 27.712
BXD40/TyJ m 40.6287 5.5957 51.6186 29.6389
BXD42/TyJ m 42.3422 5.2757 52.7035 31.9809
BXD5/TyJ m 23.04 5.9821 34.7886 11.2914
BXD6/TyJ m 35.3757 5.9821 47.1243 23.6271
BXD8/TyJ m 46.1975 5.5957 57.1873 35.2077
BXD9/TyJ m 31.4325 5.5957 42.4223 20.4427
BXH10/TyJ m 25.436 5.005 35.2656 15.6064
BXH14/TyJ m 32.9989 5.2757 43.3602 22.6376
BXH19/TyJ m 41.5886 4.23 49.8961 33.281
BXH20/KccJ m 50.0683 6.4614 62.7583 37.3784
BXH22/KccJ m 30.4944 5.2757 40.8558 20.1331
BXH2/TyJ m 46.0907 4.0865 54.1165 38.0648
BXH4/TyJ m 26.3271 5.9821 38.0758 14.5785
BXH6/TyJ m 50.5375 5.5957 61.5273 39.5477
BXH7/TyJ m 22.3167 9.1378 40.263 4.3704
BXH8/TyJ m 47.0067 6.4614 59.6966 34.3167
BXH9/TyJ m 38.242 7.0781 52.1432 24.3408
C3H/HeJ m 40.035 5.5957 51.0248 29.0452
C57BL/6J m 28.8342 4.5689 37.8073 19.861
C57L/J m 41.8487 5.5957 52.8386 30.8589
C58/J m 52.2237 5.5957 63.2136 41.2339
CAST/EiJ m 59.7333 9.1378 77.6796 41.787
CBA/J m 37.0055 4.772 46.3776 27.6333
CE/J m 56.3475 7.9135 71.8895 40.8055
DBA/2J m 39.6533 4.5689 48.6265 30.6802
FVB/NJ m 45.5058 4.5689 54.479 36.5327
KK/HlJ m 23.9543 5.9821 35.7029 12.2057
LG/J m 67.2067 9.1378 85.153 49.2604
LP/J m 39.6109 4.772 48.9831 30.2388
MA/MyJ m 31.79 7.9135 47.332 16.248
NOD/ShiLtJ m 43.9563 5.5957 54.9461 32.9664
NON/ShiLtJ m 43.05 5.9821 54.7986 31.3014
NZB/BlNJ m 20.5229 5.9821 32.2715 8.7742
NZW/LacJ m 26.3125 7.9135 41.8545 10.7705
PL/J m 25.85 7.9135 41.392 10.308
SEA/GnJ m 27.3671 5.9821 39.1158 15.6185
SM/J m 42.1106 3.9568 49.8816 34.3396
SWR/J m 56.7345 4.772 66.1067 47.3624




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